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The map label for this gene is 86748596

Identifier: 86748596

GI number: 86748596

Start: 1660620

End: 1661051

Strand: Direct

Name: 86748596

Synonym: RPB_1471

Alternate gene names: NA

Gene position: 1660620-1661051 (Clockwise)

Preceding gene: 86748595

Following gene: 86748602

Centisome position: 31.15

GC content: 62.73

Gene sequence:

>432_bases
ATGGCCGATTCGAACGATCCGTTCTCCACCGTCATGCCGTTCCAACTCCCCGAGCAGGTTCGCGCCTTCGCCGAGAAGGG
CGTGTCGCAGGCCCGCGAAAGCTACAGCAAGCTGCGCGACGTCGCCGAAACCAACAACGGCGCGATCGAGGCGGTGTTCT
CCTCGGCCAGCAAGGGCGCGACCGACTACTCGACCAAGGTGTTCGACTTCGTGAAGACCAACACCAGCGCCAATTTCGAT
TTCGCCCACAGCCTGTTCGGCGCCAAGACGCTGCCGGAAATCATGGAAATGTGGACCTCGCACGCCAAGAAGCAGGTCGA
GGTGCTGACCTCGCAGACCAAGGAACTCACCGAGCTGAGCCAGAAGGTCGCCGCCGAGACCGTCGAGCCGATCAAGGCCA
GCGCCTCGAAGATGTTCACGCCCGCCGGCTGA

Upstream 100 bases:

>100_bases
CTCACTCAGGCTCGCTCACTCAGGCTCGGCGTTTCGGACCATTTTTGGTCGGGTCATCGCGCGGGCCACTTCGATCTCCC
CACCACCGAAGGATGTCCCC

Downstream 100 bases:

>100_bases
TCCAGCGCCGTTCGCGCGATTTCGAAAGCCCGGGCATCGTCCCGGGCTTTTTTGTCGAAACCGACCCACGACATTCGTCG
GAGGGCCTTCCGCGGCCTTG

Product: phasin 2 protein

Products: NA

Alternate protein names: Phasin 2 Protein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MADSNDPFSTVMPFQLPEQVRAFAEKGVSQARESYSKLRDVAETNNGAIEAVFSSASKGATDYSTKVFDFVKTNTSANFD
FAHSLFGAKTLPEIMEMWTSHAKKQVEVLTSQTKELTELSQKVAAETVEPIKASASKMFTPAG

Sequences:

>Translated_143_residues
MADSNDPFSTVMPFQLPEQVRAFAEKGVSQARESYSKLRDVAETNNGAIEAVFSSASKGATDYSTKVFDFVKTNTSANFD
FAHSLFGAKTLPEIMEMWTSHAKKQVEVLTSQTKELTELSQKVAAETVEPIKASASKMFTPAG
>Mature_142_residues
ADSNDPFSTVMPFQLPEQVRAFAEKGVSQARESYSKLRDVAETNNGAIEAVFSSASKGATDYSTKVFDFVKTNTSANFDF
AHSLFGAKTLPEIMEMWTSHAKKQVEVLTSQTKELTELSQKVAAETVEPIKASASKMFTPAG

Specific function: Unknown

COG id: COG5490

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15596; Mature: 15464

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSNDPFSTVMPFQLPEQVRAFAEKGVSQARESYSKLRDVAETNNGAIEAVFSSASKGA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
TDYSTKVFDFVKTNTSANFDFAHSLFGAKTLPEIMEMWTSHAKKQVEVLTSQTKELTELS
CCHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKVAAETVEPIKASASKMFTPAG
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADSNDPFSTVMPFQLPEQVRAFAEKGVSQARESYSKLRDVAETNNGAIEAVFSSASKGA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
TDYSTKVFDFVKTNTSANFDFAHSLFGAKTLPEIMEMWTSHAKKQVEVLTSQTKELTELS
CCHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKVAAETVEPIKASASKMFTPAG
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA