| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748564
Identifier: 86748564
GI number: 86748564
Start: 1628385
End: 1628762
Strand: Reverse
Name: 86748564
Synonym: RPB_1439
Alternate gene names: NA
Gene position: 1628762-1628385 (Counterclockwise)
Preceding gene: 86748567
Following gene: 86748563
Centisome position: 30.55
GC content: 68.52
Gene sequence:
>378_bases ATGTTTTCTCACGTCATGATCGGCACCAACGACCTCGAGGCGGCGAAGTCGTTCTACGACAAGCTGCTCGGCACACTCGG CATCGCCCCGGGCGCGGTCGACCGCCACCGGGTCTTCTACCGCAGCAAGACCGGCACCTTCTCGGTGTCGAAGCCGATCG ACGGCCAGCCGGCGACGCCGGCCAATGGTGGCACCATCGGCTTCCTCGCCAAATCCCCCGAAGAGGCCGACGCCTGGCAC GCCGCCGGCGTCGCCAGCGGCGGCACGCCCTGCGAGGACCCGCCGGGGGTCCGCGAGATGGGCGGCACCAGGATGTATCT CGCCTATCTGCGCGACCCCGACGGCAACAAGATCTGCGCACTGCACCGGATGGGGTGA
Upstream 100 bases:
>100_bases CCGCGGACGGCCGCATCCGCCGTCTCGCCAAATCGCAAGCGACGCGTATAGTCGCCGCATCACCCTCGGGGTGAAATCAA AAACAACCTAAGGGAGCACC
Downstream 100 bases:
>100_bases GTTCTGCGAGCACGCTGCGCCGCAGCGTTGCAAGCGGGAAGTCCGCCTGATCCACAGCCGGCGCCTACGCCGCCGGTGCT TCGCAAATGCTCAACGACGT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Dioxygenase; Lactoylglutathione Lyase Protein; Lactoylglutathione Lyase-Like Lyase; Glyoxalase/Dioxygenase; Glyoxalase/Bleomycin Resistance; Isocitrate Dehydrogenase; Glyoxalase-Family Protein; Glyoxalase/Bleomycin Resistance Dioxygenase; Glyoxalase Family Protein Family Protein; Dioxygenase-Family Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MFSHVMIGTNDLEAAKSFYDKLLGTLGIAPGAVDRHRVFYRSKTGTFSVSKPIDGQPATPANGGTIGFLAKSPEEADAWH AAGVASGGTPCEDPPGVREMGGTRMYLAYLRDPDGNKICALHRMG
Sequences:
>Translated_125_residues MFSHVMIGTNDLEAAKSFYDKLLGTLGIAPGAVDRHRVFYRSKTGTFSVSKPIDGQPATPANGGTIGFLAKSPEEADAWH AAGVASGGTPCEDPPGVREMGGTRMYLAYLRDPDGNKICALHRMG >Mature_125_residues MFSHVMIGTNDLEAAKSFYDKLLGTLGIAPGAVDRHRVFYRSKTGTFSVSKPIDGQPATPANGGTIGFLAKSPEEADAWH AAGVASGGTPCEDPPGVREMGGTRMYLAYLRDPDGNKICALHRMG
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13226; Mature: 13226
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSHVMIGTNDLEAAKSFYDKLLGTLGIAPGAVDRHRVFYRSKTGTFSVSKPIDGQPATP CCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCC ANGGTIGFLAKSPEEADAWHAAGVASGGTPCEDPPGVREMGGTRMYLAYLRDPDGNKICA CCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCEEEE LHRMG EEECC >Mature Secondary Structure MFSHVMIGTNDLEAAKSFYDKLLGTLGIAPGAVDRHRVFYRSKTGTFSVSKPIDGQPATP CCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCC ANGGTIGFLAKSPEEADAWHAAGVASGGTPCEDPPGVREMGGTRMYLAYLRDPDGNKICA CCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCCEEEE LHRMG EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA