| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748551
Identifier: 86748551
GI number: 86748551
Start: 1613163
End: 1613435
Strand: Direct
Name: 86748551
Synonym: RPB_1426
Alternate gene names: NA
Gene position: 1613163-1613435 (Clockwise)
Preceding gene: 86748550
Following gene: 86748556
Centisome position: 30.26
GC content: 62.64
Gene sequence:
>273_bases ATGGCCACCTCTGCTGCCGCCGTCCAAGACGAGCCCGCGACCAAATTCGCCAAGGACCAGCTCAAGGCCATCATCGAGCG CATCGAGCGGCTCGAAGAAGAGAAGAAGACGATCTCCGACGACATCCGCGACGTCTATGCCGAAGCCAAGGGCAACGGCT ACGACGTCAAGGCGCTGCGCACCATCGTCCGGATGCGCAAGCAGGACGCCAATGAGCGCGCCGAGCAGGAGACGATCCTC GAGACCTACATGCAGGCGCTCGGCATGCTGTGA
Upstream 100 bases:
>100_bases TTGACGGGGCGGGCCGCTCTGGGGACTGTCCCCCCAAGATGCGGCGCGTGGCGTTCATCCCCGCCGCCTTTTCCGATCAT CAAATCCCCAGGAGTGAACG
Downstream 100 bases:
>100_bases GGCGAAGGCCTCGTGGCGATCGGTTTCGGCAACGCGAAGGTCTTGCAGAGCGGCGGCCTGGAAACCAAGCCGGCGCGCTC TCCACGCGTCGTCACCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MATSAAAVQDEPATKFAKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALRTIVRMRKQDANERAEQETIL ETYMQALGML
Sequences:
>Translated_90_residues MATSAAAVQDEPATKFAKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALRTIVRMRKQDANERAEQETIL ETYMQALGML >Mature_89_residues ATSAAAVQDEPATKFAKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALRTIVRMRKQDANERAEQETILE TYMQALGML
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 10234; Mature: 10103
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSAAAVQDEPATKFAKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALR CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH TIVRMRKQDANERAEQETILETYMQALGML HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATSAAAVQDEPATKFAKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALR CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH TIVRMRKQDANERAEQETILETYMQALGML HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA