| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yajO [H]
Identifier: 86748413
GI number: 86748413
Start: 1470656
End: 1471597
Strand: Reverse
Name: yajO [H]
Synonym: RPB_1288
Alternate gene names: 86748413
Gene position: 1471597-1470656 (Counterclockwise)
Preceding gene: 86748414
Following gene: 86748412
Centisome position: 27.6
GC content: 66.88
Gene sequence:
>942_bases ATGCAACTTCGTAATCTCGGCGGCAGCGGGCTGCGCGTCTCCGTCGTCGGCCTCGGCTGCAACAATTTCGGCCAGCGCAC CGACCCCGACACTTCGCGCAAGGTCATCCACAAGGCGATCGATCTCGGCGTCACGCTGTTCGACACCGCCGACATCTATG CGGGCCAGGGCGGCTCCGAGACGGTGCTCGGCGACGTGCTCGGCGATCGCCGCAAGGACATCGTGCTGGCAACCAAATTC AGCAAGCCGATGGCCGCCGACGGCACCAAGCAGGGCGCGTCGCGGCGCTACATCGTCGCCGCCGTCGAGGCCAGCCTCAA GCGGCTGAAGACCGACTGGATCGACCTGTACCAGCAGCACGATTACGACGAGCTGACGCCGATCGACGAGACGCTGCGCG CGCTCGACGACCTGATCCGCGCCGGCAAGGTGCGCTACATCGGCAATTCGAATTTCCCGGCGTGGCGCATTGCCGAGGCC GAATACGTCGCCCGCGCGCTCGGCACGCATCGCTTCGTGTCGTGCCAGGACGAATACAGCCTCGTCGTCCGCGACATCGA GAAGGATCTGCTGCCGGCGGCGCAGGAATACAAGCTCGGCCTGCTGCCGTTCTTCCCGCTGGCCAGCGGCCTGCTGACCG GCAAGTATCAGCGCGGCGCCGAGGCGCCGGCGCACACCCGCTTCGCCAAGATGCCGGCGATCCGCGACCGCTACTTCACC GAGGTCAATCTCGTCGTCGTCGACCGGCTCAAGGCGTTCGCGGAGTCGCACGGCAAGTCGCTGCTCGACCTCGCCTTCTC CTGGCTCGCCTGCCGCCCGCAAGTCTCCAGCGTGATCGCCGGCGCCACCTCGCCGGAGCAGATCGAGCAGAACGTCAAGG CGGCGAGCTGGCAGCTCGGCGCCGAGGAGATGGCGGAGATCGATACGATTACGAAGGGGTAG
Upstream 100 bases:
>100_bases GCCGGCCTGACGCCGCATCGCTGATGTGAACGCGGCCGCCTTGCCGCCGCGCGGCGCGCGCGGCACAATGCGGGCTTCGG CGTTTCGCACAGGACCCTTC
Downstream 100 bases:
>100_bases CAATCGGGCGGAAGCACCGCGGATTGCGCTTACGTTGCCCCTGCCTCCGCGCTAAACTCTCGCGATGGAACCGCAGCCGA ACACGCTCCCTCCCCAAGCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MQLRNLGGSGLRVSVVGLGCNNFGQRTDPDTSRKVIHKAIDLGVTLFDTADIYAGQGGSETVLGDVLGDRRKDIVLATKF SKPMAADGTKQGASRRYIVAAVEASLKRLKTDWIDLYQQHDYDELTPIDETLRALDDLIRAGKVRYIGNSNFPAWRIAEA EYVARALGTHRFVSCQDEYSLVVRDIEKDLLPAAQEYKLGLLPFFPLASGLLTGKYQRGAEAPAHTRFAKMPAIRDRYFT EVNLVVVDRLKAFAESHGKSLLDLAFSWLACRPQVSSVIAGATSPEQIEQNVKAASWQLGAEEMAEIDTITKG
Sequences:
>Translated_313_residues MQLRNLGGSGLRVSVVGLGCNNFGQRTDPDTSRKVIHKAIDLGVTLFDTADIYAGQGGSETVLGDVLGDRRKDIVLATKF SKPMAADGTKQGASRRYIVAAVEASLKRLKTDWIDLYQQHDYDELTPIDETLRALDDLIRAGKVRYIGNSNFPAWRIAEA EYVARALGTHRFVSCQDEYSLVVRDIEKDLLPAAQEYKLGLLPFFPLASGLLTGKYQRGAEAPAHTRFAKMPAIRDRYFT EVNLVVVDRLKAFAESHGKSLLDLAFSWLACRPQVSSVIAGATSPEQIEQNVKAASWQLGAEEMAEIDTITKG >Mature_313_residues MQLRNLGGSGLRVSVVGLGCNNFGQRTDPDTSRKVIHKAIDLGVTLFDTADIYAGQGGSETVLGDVLGDRRKDIVLATKF SKPMAADGTKQGASRRYIVAAVEASLKRLKTDWIDLYQQHDYDELTPIDETLRALDDLIRAGKVRYIGNSNFPAWRIAEA EYVARALGTHRFVSCQDEYSLVVRDIEKDLLPAAQEYKLGLLPFFPLASGLLTGKYQRGAEAPAHTRFAKMPAIRDRYFT EVNLVVVDRLKAFAESHGKSLLDLAFSWLACRPQVSSVIAGATSPEQIEQNVKAASWQLGAEEMAEIDTITKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=322, Percent_Identity=33.2298136645963, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI27436969, Length=320, Percent_Identity=33.4375, Blast_Score=157, Evalue=8e-39, Organism=Homo sapiens, GI27436962, Length=322, Percent_Identity=33.2298136645963, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI27436966, Length=322, Percent_Identity=33.2298136645963, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI4504825, Length=317, Percent_Identity=33.4384858044164, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI27436971, Length=321, Percent_Identity=33.0218068535826, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI223718702, Length=312, Percent_Identity=31.7307692307692, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI41152114, Length=313, Percent_Identity=31.629392971246, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI41327764, Length=319, Percent_Identity=30.4075235109718, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI223718708, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI87081735, Length=322, Percent_Identity=34.7826086956522, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI1789375, Length=318, Percent_Identity=34.2767295597484, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1789199, Length=344, Percent_Identity=30.8139534883721, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1788070, Length=327, Percent_Identity=29.0519877675841, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788081, Length=310, Percent_Identity=28.3870967741935, Blast_Score=99, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6325169, Length=336, Percent_Identity=29.4642857142857, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=27.5541795665635, Blast_Score=123, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6319958, Length=278, Percent_Identity=28.0575539568345, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6322615, Length=253, Percent_Identity=28.0632411067194, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=265, Percent_Identity=27.5471698113208, Blast_Score=102, Evalue=9e-23, Organism=Drosophila melanogaster, GI24640980, Length=343, Percent_Identity=27.6967930029155, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI45549126, Length=343, Percent_Identity=27.6967930029155, Blast_Score=101, Evalue=7e-22, Organism=Drosophila melanogaster, GI24646155, Length=313, Percent_Identity=30.6709265175719, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24646159, Length=222, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34450; Mature: 34450
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRNLGGSGLRVSVVGLGCNNFGQRTDPDTSRKVIHKAIDLGVTLFDTADIYAGQGGSE CCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHCCCCCCC TVLGDVLGDRRKDIVLATKFSKPMAADGTKQGASRRYIVAAVEASLKRLKTDWIDLYQQH HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC DYDELTPIDETLRALDDLIRAGKVRYIGNSNFPAWRIAEAEYVARALGTHRFVSCQDEYS CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEHHHHHHHHHHCCCCEEECCHHHH LVVRDIEKDLLPAAQEYKLGLLPFFPLASGLLTGKYQRGAEAPAHTRFAKMPAIRDRYFT HHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCCHHCCCCCCHHHHHHHCCHHHHHHHH EVNLVVVDRLKAFAESHGKSLLDLAFSWLACRPQVSSVIAGATSPEQIEQNVKAASWQLG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC AEEMAEIDTITKG HHHHHHHHHCCCC >Mature Secondary Structure MQLRNLGGSGLRVSVVGLGCNNFGQRTDPDTSRKVIHKAIDLGVTLFDTADIYAGQGGSE CCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHCCCCCCC TVLGDVLGDRRKDIVLATKFSKPMAADGTKQGASRRYIVAAVEASLKRLKTDWIDLYQQH HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHC DYDELTPIDETLRALDDLIRAGKVRYIGNSNFPAWRIAEAEYVARALGTHRFVSCQDEYS CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEHHHHHHHHHHCCCCEEECCHHHH LVVRDIEKDLLPAAQEYKLGLLPFFPLASGLLTGKYQRGAEAPAHTRFAKMPAIRDRYFT HHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCCHHCCCCCCHHHHHHHCCHHHHHHHH EVNLVVVDRLKAFAESHGKSLLDLAFSWLACRPQVSSVIAGATSPEQIEQNVKAASWQLG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCC AEEMAEIDTITKG HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]