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The map label for this gene is yjlB [H]

Identifier: 86748409

GI number: 86748409

Start: 1468487

End: 1469020

Strand: Reverse

Name: yjlB [H]

Synonym: RPB_1284

Alternate gene names: 86748409

Gene position: 1469020-1468487 (Counterclockwise)

Preceding gene: 86748410

Following gene: 86748407

Centisome position: 27.55

GC content: 68.16

Gene sequence:

>534_bases
ATGTCGCTCGCCAGCGACCAGATCAAGCCGCAGTCCTATCATTTCGACGACGACGGGCTGATCCCGAACAATCCGATGCC
GCTGCTGATCTACAAGCGCGCCGTCGAGGTTGGGCGCGACGGCCCCGCGGAGGCGATCGAGGCGCTGTTCGGCCGCAACG
GCTGGGGCCAGATGTGGCGCAACGGCATTTTCGACTACGCGCATTATCACGCCACGGTGCACGAGGCGCTCGGCGTCGCG
CGCGGCCATGCGCTGGTGCTGTTCGGCGGCGACCAGGGCGAGGCGATCGAGCTGACGCCCGGCGATGTCGCAGTGCTGCC
GGCCGGCACCGGCCACAAGCGACTGTTCGCCTCGCATGATTTCCAGGTGGTCGGCGCCTATCCGCCCGGCCCCGAGATGC
AGATCATGCGGCCGACGCCGGACAATTATCGCCGGGCGCTGAAGACCATCCCGCAGGTGCCGCTGCCGCAGACCGATCCG
GTCGCCGGCGAGGACGGGCCGCTGATGCGGCTGTGGGGCAAGTCATCGCATTGA

Upstream 100 bases:

>100_bases
GTCGCACGCCACCACCACCTGCCTGGTGTTCGATTTGCCGACCGGAACCCGCCCGGCCGTGTAGCGTTGTTTCCGGCGTA
CCAACAAAGCCGGAGACCGC

Downstream 100 bases:

>100_bases
CGTCAGCAGGCCGCTAACTCACCGGAGCTTCCGCCCGGTGTGATGAGCGATCCGGGTTCTGCCTATCCGCATGTCGTCCC
CGCGCAGGCGGGGACCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSLASDQIKPQSYHFDDDGLIPNNPMPLLIYKRAVEVGRDGPAEAIEALFGRNGWGQMWRNGIFDYAHYHATVHEALGVA
RGHALVLFGGDQGEAIELTPGDVAVLPAGTGHKRLFASHDFQVVGAYPPGPEMQIMRPTPDNYRRALKTIPQVPLPQTDP
VAGEDGPLMRLWGKSSH

Sequences:

>Translated_177_residues
MSLASDQIKPQSYHFDDDGLIPNNPMPLLIYKRAVEVGRDGPAEAIEALFGRNGWGQMWRNGIFDYAHYHATVHEALGVA
RGHALVLFGGDQGEAIELTPGDVAVLPAGTGHKRLFASHDFQVVGAYPPGPEMQIMRPTPDNYRRALKTIPQVPLPQTDP
VAGEDGPLMRLWGKSSH
>Mature_176_residues
SLASDQIKPQSYHFDDDGLIPNNPMPLLIYKRAVEVGRDGPAEAIEALFGRNGWGQMWRNGIFDYAHYHATVHEALGVAR
GHALVLFGGDQGEAIELTPGDVAVLPAGTGHKRLFASHDFQVVGAYPPGPEMQIMRPTPDNYRRALKTIPQVPLPQTDPV
AGEDGPLMRLWGKSSH

Specific function: Unknown

COG id: COG4297

COG function: function code S; Uncharacterized protein containing double-stranded beta helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710
- InterPro:   IPR014500 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 19358; Mature: 19227

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLASDQIKPQSYHFDDDGLIPNNPMPLLIYKRAVEVGRDGPAEAIEALFGRNGWGQMWR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCHHHHHH
NGIFDYAHYHATVHEALGVARGHALVLFGGDQGEAIELTPGDVAVLPAGTGHKRLFASHD
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCEEEECCC
FQVVGAYPPGPEMQIMRPTPDNYRRALKTIPQVPLPQTDPVAGEDGPLMRLWGKSSH
EEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SLASDQIKPQSYHFDDDGLIPNNPMPLLIYKRAVEVGRDGPAEAIEALFGRNGWGQMWR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCHHHHHH
NGIFDYAHYHATVHEALGVARGHALVLFGGDQGEAIELTPGDVAVLPAGTGHKRLFASHD
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCEEEECCC
FQVVGAYPPGPEMQIMRPTPDNYRRALKTIPQVPLPQTDPVAGEDGPLMRLWGKSSH
EEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]