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The map label for this gene is 86748346

Identifier: 86748346

GI number: 86748346

Start: 1396370

End: 1397917

Strand: Reverse

Name: 86748346

Synonym: RPB_1221

Alternate gene names: NA

Gene position: 1397917-1396370 (Counterclockwise)

Preceding gene: 86748347

Following gene: 86748345

Centisome position: 26.22

GC content: 67.05

Gene sequence:

>1548_bases
ATGACAGCAACCAAGTCATCATCAGAGAAACAAGACATGACCCGTATCGCCGTCGGCGGCTTTCTGCACGAGACCAATAC
TTTTGCGCCCACCAAGGCCACCTGGGAGGCGTTCGTGCACGGCGGCGGCTGGCCGGCGATGACGATGGGCGCCGACGTGC
TCAAGGTGATGCGCGGCATCAATGTCGGGCTCGCCGGCTTCGTCGAGGACGCCGAGCGCAAAGGCTGGGAGTTGGTCCCG
ACCATCGCCTGCGGGGCGAGCCCGTCGGCCCACGTCACCGAAGACGCCTTCGAACGCGTCGTGAAGGCGATGATCGACGG
CATCCAGGCCGCCGGCAAACTCGACGCGGTGTATCTCGATCTGCACGGCGCCATGGTCACCGAACATCTCGACGACGGCG
AAGGCGAGATCCTCTCGCGCGTCCGCGAGGTGATCGGCCCCGATTTGCCGCTGGTGGTCAGCATCGATCTGCACGCCAAC
GTCACGCCAGCGATGATCGACCATGCCGACGCGCTGATCGCCTACCGCACCTATCCGCATGTCGACATGGCCGACACCGG
CCGCGCCGCGGCGAAGCACCTCGATCTGCTGCTGCAGAGCGGCGCGAAATACGCGAAGGCGTTCCGGCAATTGCCGTTCC
TGATCCCGATCTCGTGGCAATGCACCTTCGACGAGCCGACCAAGGGCATCTACGCCAAGCTCGCCGCGCTGGAGAGCGAC
GCGGTGCCGACGCTGTCGTTCGCGCCGGGCTTCCCGGCCGCCGATTTTCCGGATTGCGGCCCCAGCGTGTTCGCCTATGG
CCGCACCCAGGCGGATGCCGACGCCGCGGCCGACAAAGTCGCCGCTTTGGTGATCGGCCACGAGAATGATTTCGACGGCA
CCATCCATTCGCCCGACGACGGCGTGCGGCTGGCGATGCAGATCGCACGCGGCGCGGCAAAGCCGGTGATCATCGCCGAC
ACCCAGGACAATCCCGGGGCCGGCGGCGATTCCGACACCACCGGCATGTTGCGCGCACTGGTGCGCAACGACGCGCAGCG
CGCCGCGATCGGCGTGATCTACGATCCCGTGTCGGCGCAAGCCGCACACGCCGCGGGCGTCGGCGCCACCGTCAGGCTGG
CGCTCGGTGGCAAGTCGGGCATCGCCGGCGACGCGCCCTACGAAGAGAGTTTCGTCGTCGAGCATCTGTCCGACGGCCGC
TTCGTCGCACCCGGTCCTTACTATGGCGGGCGCGAGATGGAGATGGGGCCGTCGGCGTGCCTGCGCATCGGCGACGTGCG
CGTCGTCGTCAGCTCGCACAAGGCGCAGCTCGCCGATCAGGCGATGTATCGCTATGTCGGCATCGAGCCGACCGAACAGG
CGATCCTCGTCGTGAAGAGTTCGGTGCATTTTCGCGCCGACTTCCAGCCGATCGCCGAGCGCCTGCTGATCTGCGCCGCG
CCCGGCGCGATGCCGGCGGATACCGCGTCGTTGCAGTGGACACGCCTGCGCCCGGGCGTGCGTGTCAAGCCGAATGGACA
ACCGTTTCTCGGCCGCAACGCCAACTAA

Upstream 100 bases:

>100_bases
ACCGAGTCATTCCGGGGCGCGCGTCGCGCGAGCCCGGAATCCATAACCACCGTCAGGGGATATGGATTCCGGGCCTGCGC
CCCAAGGGGCGCATCCCGGA

Downstream 100 bases:

>100_bases
TCGGTTGACGTCAAGCGCGCGTGACGCGCGGATTGTTTCAAATGGTACGTGCGGAGTCGCGTCGTGACGCCGCACTCACT
CCGCCTCATATACGCAGATA

Product: MlrC-like protein

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MTATKSSSEKQDMTRIAVGGFLHETNTFAPTKATWEAFVHGGGWPAMTMGADVLKVMRGINVGLAGFVEDAERKGWELVP
TIACGASPSAHVTEDAFERVVKAMIDGIQAAGKLDAVYLDLHGAMVTEHLDDGEGEILSRVREVIGPDLPLVVSIDLHAN
VTPAMIDHADALIAYRTYPHVDMADTGRAAAKHLDLLLQSGAKYAKAFRQLPFLIPISWQCTFDEPTKGIYAKLAALESD
AVPTLSFAPGFPAADFPDCGPSVFAYGRTQADADAAADKVAALVIGHENDFDGTIHSPDDGVRLAMQIARGAAKPVIIAD
TQDNPGAGGDSDTTGMLRALVRNDAQRAAIGVIYDPVSAQAAHAAGVGATVRLALGGKSGIAGDAPYEESFVVEHLSDGR
FVAPGPYYGGREMEMGPSACLRIGDVRVVVSSHKAQLADQAMYRYVGIEPTEQAILVVKSSVHFRADFQPIAERLLICAA
PGAMPADTASLQWTRLRPGVRVKPNGQPFLGRNAN

Sequences:

>Translated_515_residues
MTATKSSSEKQDMTRIAVGGFLHETNTFAPTKATWEAFVHGGGWPAMTMGADVLKVMRGINVGLAGFVEDAERKGWELVP
TIACGASPSAHVTEDAFERVVKAMIDGIQAAGKLDAVYLDLHGAMVTEHLDDGEGEILSRVREVIGPDLPLVVSIDLHAN
VTPAMIDHADALIAYRTYPHVDMADTGRAAAKHLDLLLQSGAKYAKAFRQLPFLIPISWQCTFDEPTKGIYAKLAALESD
AVPTLSFAPGFPAADFPDCGPSVFAYGRTQADADAAADKVAALVIGHENDFDGTIHSPDDGVRLAMQIARGAAKPVIIAD
TQDNPGAGGDSDTTGMLRALVRNDAQRAAIGVIYDPVSAQAAHAAGVGATVRLALGGKSGIAGDAPYEESFVVEHLSDGR
FVAPGPYYGGREMEMGPSACLRIGDVRVVVSSHKAQLADQAMYRYVGIEPTEQAILVVKSSVHFRADFQPIAERLLICAA
PGAMPADTASLQWTRLRPGVRVKPNGQPFLGRNAN
>Mature_514_residues
TATKSSSEKQDMTRIAVGGFLHETNTFAPTKATWEAFVHGGGWPAMTMGADVLKVMRGINVGLAGFVEDAERKGWELVPT
IACGASPSAHVTEDAFERVVKAMIDGIQAAGKLDAVYLDLHGAMVTEHLDDGEGEILSRVREVIGPDLPLVVSIDLHANV
TPAMIDHADALIAYRTYPHVDMADTGRAAAKHLDLLLQSGAKYAKAFRQLPFLIPISWQCTFDEPTKGIYAKLAALESDA
VPTLSFAPGFPAADFPDCGPSVFAYGRTQADADAAADKVAALVIGHENDFDGTIHSPDDGVRLAMQIARGAAKPVIIADT
QDNPGAGGDSDTTGMLRALVRNDAQRAAIGVIYDPVSAQAAHAAGVGATVRLALGGKSGIAGDAPYEESFVVEHLSDGRF
VAPGPYYGGREMEMGPSACLRIGDVRVVVSSHKAQLADQAMYRYVGIEPTEQAILVVKSSVHFRADFQPIAERLLICAAP
GAMPADTASLQWTRLRPGVRVKPNGQPFLGRNAN

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54518; Mature: 54387

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATKSSSEKQDMTRIAVGGFLHETNTFAPTKATWEAFVHGGGWPAMTMGADVLKVMRGI
CCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHCC
NVGLAGFVEDAERKGWELVPTIACGASPSAHVTEDAFERVVKAMIDGIQAAGKLDAVYLD
CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
LHGAMVTEHLDDGEGEILSRVREVIGPDLPLVVSIDLHANVTPAMIDHADALIAYRTYPH
ECCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCEEEEEECCCC
VDMADTGRAAAKHLDLLLQSGAKYAKAFRQLPFLIPISWQCTFDEPTKGIYAKLAALESD
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC
AVPTLSFAPGFPAADFPDCGPSVFAYGRTQADADAAADKVAALVIGHENDFDGTIHSPDD
CCCEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHEEEEEEECCCCCCCCCCCCCH
GVRLAMQIARGAAKPVIIADTQDNPGAGGDSDTTGMLRALVRNDAQRAAIGVIYDPVSAQ
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHEEEEEEECCCCCH
AAHAAGVGATVRLALGGKSGIAGDAPYEESFVVEHLSDGRFVAPGPYYGGREMEMGPSAC
HHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHH
LRIGDVRVVVSSHKAQLADQAMYRYVGIEPTEQAILVVKSSVHFRADFQPIAERLLICAA
EEECCEEEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCHHHHHHHEEEEEC
PGAMPADTASLQWTRLRPGVRVKPNGQPFLGRNAN
CCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
TATKSSSEKQDMTRIAVGGFLHETNTFAPTKATWEAFVHGGGWPAMTMGADVLKVMRGI
CCCCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHCC
NVGLAGFVEDAERKGWELVPTIACGASPSAHVTEDAFERVVKAMIDGIQAAGKLDAVYLD
CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
LHGAMVTEHLDDGEGEILSRVREVIGPDLPLVVSIDLHANVTPAMIDHADALIAYRTYPH
ECCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCEEEEEECCCC
VDMADTGRAAAKHLDLLLQSGAKYAKAFRQLPFLIPISWQCTFDEPTKGIYAKLAALESD
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC
AVPTLSFAPGFPAADFPDCGPSVFAYGRTQADADAAADKVAALVIGHENDFDGTIHSPDD
CCCEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHEEEEEEECCCCCCCCCCCCCH
GVRLAMQIARGAAKPVIIADTQDNPGAGGDSDTTGMLRALVRNDAQRAAIGVIYDPVSAQ
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHEEEEEEECCCCCH
AAHAAGVGATVRLALGGKSGIAGDAPYEESFVVEHLSDGRFVAPGPYYGGREMEMGPSAC
HHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHH
LRIGDVRVVVSSHKAQLADQAMYRYVGIEPTEQAILVVKSSVHFRADFQPIAERLLICAA
EEECCEEEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCHHHHHHHEEEEEC
PGAMPADTASLQWTRLRPGVRVKPNGQPFLGRNAN
CCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA