| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748345
Identifier: 86748345
GI number: 86748345
Start: 1395185
End: 1396168
Strand: Reverse
Name: 86748345
Synonym: RPB_1220
Alternate gene names: NA
Gene position: 1396168-1395185 (Counterclockwise)
Preceding gene: 86748346
Following gene: 86748344
Centisome position: 26.19
GC content: 62.4
Gene sequence:
>984_bases ATGTCAGTCGTCGGCGGCGAAACATTCGAGACGCAAACGGCCACGCAAAACTACGCACGGTCGAATCTTGCCAATCCGGT CGGAGGCATTCGGGCCGATATCGTCACCAAGGTCGGTCGACTCGCGACCTACTCGATCGGATTCCCGTCGAGCGACGATA CGACGCGGCCGCTGCTCTTGGTGCACAGCGTCAACGCCGCCGGTTCGGCGTTCGAGATGAAGACGCTGTACGACCACTAC GCCAAGCACCGCCCTGTTCACGCGGTCGACCTCCCCGGCTTCGGCCAGTCCGATCGCGACGATCGCGAATACACCGCCCG GGTGATGACCGATGCCGTGCACGCAGCGATCGCGCGCGTGCAGGAGGTGCACGGACCGCAGCCGATCGACGTGCTCGGAT TGTCACTGTCGTGCGAATTCGTCGCTCGCGCAGCGGCCGAGAAGCCCGAGGCATTCGCCACCCTCGGCCTGATCAGCCCG ACCGGCTTCGAAGGCAAGGCGCGCGACGAGCGGGTGCCGTCGACACGTGGGCAGTCCTGGCTGCTGAGCACGCTGCGGTT CCGGCTCTGGGACGACGGCTTCTTCAAGCTGCTGACGGCCAAGCCGGTGATTCGCAAATTCCTCGAGAAGGCGTGGGGCT CGAAGAACATCGACGAGTCGATGCTCGAATACGACTACCATACTACCCATCAGCCCGGCGCGCGCTATGCGCCCTACTAC TTCGTCGCGGGCTATATGTTCAGCAAGGACATTCTGAGCGTCTACAAATCGCTGCGCCTGCCGGTCTGGATGGCCTACGG CGTGCGCGGCGATTTCGTCGATTATCGCCACAAGAGCCGCGTCGCCGGACGCTCGAACTGGACCATCGTCCAGTTCGACG CGGGTGCAATGATGCACTTCGAAATTCTCGATCAGGTGGTGCGTTCATACGACCAGTTTCTGGCTGTGTCAGCGAAGACT GACGCACCTGTTATGAGCGCATGA
Upstream 100 bases:
>100_bases CAATTTTCACTGATTAGTTTCATTTCACGCTTTCAGCACTGGAACTGAACGAGTTCCACGCCATTTTCTCCCTCAGATTC ATTCTCCAAGGGGGACGCAA
Downstream 100 bases:
>100_bases CACTGTCGGAGCGCCGCACGTAGATGTGATGCGGCGCTCCCTGCGATCATTACATGGCTCCGGATTTCGGGTTGCAATCG GCAGCGCGAGCGCTGTTAAT
Product: Alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSVVGGETFETQTATQNYARSNLANPVGGIRADIVTKVGRLATYSIGFPSSDDTTRPLLLVHSVNAAGSAFEMKTLYDHY AKHRPVHAVDLPGFGQSDRDDREYTARVMTDAVHAAIARVQEVHGPQPIDVLGLSLSCEFVARAAAEKPEAFATLGLISP TGFEGKARDERVPSTRGQSWLLSTLRFRLWDDGFFKLLTAKPVIRKFLEKAWGSKNIDESMLEYDYHTTHQPGARYAPYY FVAGYMFSKDILSVYKSLRLPVWMAYGVRGDFVDYRHKSRVAGRSNWTIVQFDAGAMMHFEILDQVVRSYDQFLAVSAKT DAPVMSA
Sequences:
>Translated_327_residues MSVVGGETFETQTATQNYARSNLANPVGGIRADIVTKVGRLATYSIGFPSSDDTTRPLLLVHSVNAAGSAFEMKTLYDHY AKHRPVHAVDLPGFGQSDRDDREYTARVMTDAVHAAIARVQEVHGPQPIDVLGLSLSCEFVARAAAEKPEAFATLGLISP TGFEGKARDERVPSTRGQSWLLSTLRFRLWDDGFFKLLTAKPVIRKFLEKAWGSKNIDESMLEYDYHTTHQPGARYAPYY FVAGYMFSKDILSVYKSLRLPVWMAYGVRGDFVDYRHKSRVAGRSNWTIVQFDAGAMMHFEILDQVVRSYDQFLAVSAKT DAPVMSA >Mature_326_residues SVVGGETFETQTATQNYARSNLANPVGGIRADIVTKVGRLATYSIGFPSSDDTTRPLLLVHSVNAAGSAFEMKTLYDHYA KHRPVHAVDLPGFGQSDRDDREYTARVMTDAVHAAIARVQEVHGPQPIDVLGLSLSCEFVARAAAEKPEAFATLGLISPT GFEGKARDERVPSTRGQSWLLSTLRFRLWDDGFFKLLTAKPVIRKFLEKAWGSKNIDESMLEYDYHTTHQPGARYAPYYF VAGYMFSKDILSVYKSLRLPVWMAYGVRGDFVDYRHKSRVAGRSNWTIVQFDAGAMMHFEILDQVVRSYDQFLAVSAKTD APVMSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36465; Mature: 36333
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVGGETFETQTATQNYARSNLANPVGGIRADIVTKVGRLATYSIGFPSSDDTTRPLLL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE VHSVNAAGSAFEMKTLYDHYAKHRPVHAVDLPGFGQSDRDDREYTARVMTDAVHAAIARV EEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QEVHGPQPIDVLGLSLSCEFVARAAAEKPEAFATLGLISPTGFEGKARDERVPSTRGQSW HHHCCCCCCEEEEEEHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCHHH LLSTLRFRLWDDGFFKLLTAKPVIRKFLEKAWGSKNIDESMLEYDYHTTHQPGARYAPYY HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHH FVAGYMFSKDILSVYKSLRLPVWMAYGVRGDFVDYRHKSRVAGRSNWTIVQFDAGAMMHF HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHH EILDQVVRSYDQFLAVSAKTDAPVMSA HHHHHHHHHHHHHEEEECCCCCCCCCC >Mature Secondary Structure SVVGGETFETQTATQNYARSNLANPVGGIRADIVTKVGRLATYSIGFPSSDDTTRPLLL CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE VHSVNAAGSAFEMKTLYDHYAKHRPVHAVDLPGFGQSDRDDREYTARVMTDAVHAAIARV EEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QEVHGPQPIDVLGLSLSCEFVARAAAEKPEAFATLGLISPTGFEGKARDERVPSTRGQSW HHHCCCCCCEEEEEEHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCHHH LLSTLRFRLWDDGFFKLLTAKPVIRKFLEKAWGSKNIDESMLEYDYHTTHQPGARYAPYY HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHH FVAGYMFSKDILSVYKSLRLPVWMAYGVRGDFVDYRHKSRVAGRSNWTIVQFDAGAMMHF HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHH EILDQVVRSYDQFLAVSAKTDAPVMSA HHHHHHHHHHHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA