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The map label for this gene is 86748314

Identifier: 86748314

GI number: 86748314

Start: 1362301

End: 1364364

Strand: Reverse

Name: 86748314

Synonym: RPB_1189

Alternate gene names: NA

Gene position: 1364364-1362301 (Counterclockwise)

Preceding gene: 86748315

Following gene: 86748313

Centisome position: 25.59

GC content: 69.19

Gene sequence:

>2064_bases
TTGCAATACGGCATCGCCTTCGCGCCTCTCGTTCCGACGCTCGTGCTGTGGGGCGCGCTCGCCGCCATTGCGGTGATCGC
GATCGTGCTGCTGCTCGGCCGCTCGCGCGGCGCGTGGGTGCGGATCGCCGCGCTGGCGCTGATTTTGCTGGCGCTGTCGA
ACCCGTCCTTCACCCGCGAGGAACGCGAGCCGCTGTCATCGGTCGCCGCCGTCGTCGTCGACAAGAGCCCGAGCCAGAAT
TTCGGCACCCGCGCCGCCGAGGCCGATCAGGCCAAGGAGCAACTCGTCGACCGGCTGAAGCAGCTCAAGGGCGTCGAGGT
CCGCGTCGTGGAAGCTGGTCAGGCCGACGGCGAGACCGACGGAACCAAACTGTTCGGCGCTCTCACCTCCGCGCTGTCCG
ACGTGCCGACCGACCGCGTCGCCGGGGCGTTCCTGATCACCGACGGCCGGGTTCACGACGTCCCGGCCAACGCCGCCGCC
CTCGGCTTCCAGGCCCCGGTGCACGCGCTGATCACCGGCCGCAGCAACGAGCGCGACCGCCGCATCGCCATCGTGGCCGC
GCCGCGCTTCGGCATCGTCGGCCAGAATCAGACCATCACCTACCGGCTCGACGATCAGGGCATCATCGGCGAGCGCGCCC
GCGTCGTCGTCCGCCGCGACGGCGAAGTGCTGAACGAGCGCAGCGTCGCCAGCGGCCAGACCGTCAAGGTCGACGTCGAC
ATCAAGCACGCCGGCGCCAACATCGTCGAGATCGAAGCCTCGCCGGTCGACAACGAATTGACCACGGTGAACAACCGCGC
CGTGGTCTCGATCGACGGCGTCCGCGACAAGCTGCGGGTGCTGCTGGTGTCGGGCGAGCCGCATTCCGGCGAGCGCACCT
GGCGCAATTTGCTGAAATCCGACGCCAGCGTCGATCTGGTGCACTTCACCATCCTGCGGCCGCCGGAGAAGCAGGACGGC
ACGCCGATCAACGAGCTGTCGCTGATCGCGTTTCCGACCCGCGAGCTGTTCCAGCAGAAGATCAACGAGTTTCAGCTGAT
CATCTTCGACCGTTACGCCCGCCAGGGCGTGCTGCCGATCGCGTATTTCGACAATATCGCGCGTTATGTGCGCAATGGCG
GCGCGGTGCTGGTGTCGGCCGGCCCGGACTACGCCTCGACCACCTCGATCTGGCGCACACCGCTCGACAGCCTGCTGCCG
GCCGAGCCGGTCGGCGTCACCGAGAAGCCGTACACGGCGCAGCTCAGCGATGCCGGCAAACGCCACCCGGTGACGCGCGC
GCTGGAGGGCTCGAATTCCGAGCCACCGAAATGGAGCCGCTTCTTCCGCACCATCGACACCCGCAACGCCACCACGCCGC
CGCTGATGACCGGCGCCGACAACATGCCGCTGTTGCTGCTGTCACACTACGGCGAGGGCCGCGTCGCGCTGCTGCTCTCC
GACCACATCTGGCTGTGGGCGCGCGGCTATGAGGGCGGCGGCCCGCATCTCGATCTGTTGCGGCGGATGTCGCACTGGCT
GATGAAGCAGCCCGACCTCGACGAGGAGGCGCTGCGGCTCAGGGTCGAGGGCAAGGATCTGCAGGTGATCCGCCAGACCA
TGGCCGACAATGTGCCGCCGGTCACCGTCACCTCGCCGTCCGGCCAGACCCGGCAGCTCACCCTCGCCCCGAGCGATCCC
GGCATCTGGCGCACGACGCTGCCGGCCGACGAACTCGGCCTTTGGGCCGCGAGCGACGGCACGCTGAAGGCGCTGATCAA
TGTCGGGCCGGTCAACCCGAAGGAATTCTCCGAAGTCACGTCGACCGCGGAGACGCTGAAGCCGCTGGCGCTGGCGACCG
GCGGCGATGCGCGGCGGATCGCCGACGGCGGTAGCGTCGAGCTGCCGCGGATCGTCCCGGTGCAATCCGCGACGCTGTTC
CGCGGCGACGGCTGGCTCGGCGTCCGGATGCGCGACGCCAGCGTGGTCCGCGGCGTCGGCGTGTTGCCGGTGTTCACCGG
GCTGATCGGTCTGTTGCTGCTGCTCGGCGCGTTCGCGGCGACCTGGCTGCGCGAGGGGCGCTAG

Upstream 100 bases:

>100_bases
CGAAGGATGGAGACGCGTACCGTGCGGCCATCCTTCGAGGCGCGTCGCAAGGGCGACGCGCACCTCAGGATGACGCTGTC
GATGTCGAGAGGTTAGTTCA

Downstream 100 bases:

>100_bases
CAGCAGCCCGTCGCTGTGAAGCATCGAACCGCTGATGGCCCCTCGGCTTGACGACTGCCCAAAACCGAAGTCTCCTCGCG
AGGCGTTTTCGACCTATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MQYGIAFAPLVPTLVLWGALAAIAVIAIVLLLGRSRGAWVRIAALALILLALSNPSFTREEREPLSSVAAVVVDKSPSQN
FGTRAAEADQAKEQLVDRLKQLKGVEVRVVEAGQADGETDGTKLFGALTSALSDVPTDRVAGAFLITDGRVHDVPANAAA
LGFQAPVHALITGRSNERDRRIAIVAAPRFGIVGQNQTITYRLDDQGIIGERARVVVRRDGEVLNERSVASGQTVKVDVD
IKHAGANIVEIEASPVDNELTTVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKSDASVDLVHFTILRPPEKQDG
TPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPIAYFDNIARYVRNGGAVLVSAGPDYASTTSIWRTPLDSLLP
AEPVGVTEKPYTAQLSDAGKRHPVTRALEGSNSEPPKWSRFFRTIDTRNATTPPLMTGADNMPLLLLSHYGEGRVALLLS
DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLRVEGKDLQVIRQTMADNVPPVTVTSPSGQTRQLTLAPSDP
GIWRTTLPADELGLWAASDGTLKALINVGPVNPKEFSEVTSTAETLKPLALATGGDARRIADGGSVELPRIVPVQSATLF
RGDGWLGVRMRDASVVRGVGVLPVFTGLIGLLLLLGAFAATWLREGR

Sequences:

>Translated_687_residues
MQYGIAFAPLVPTLVLWGALAAIAVIAIVLLLGRSRGAWVRIAALALILLALSNPSFTREEREPLSSVAAVVVDKSPSQN
FGTRAAEADQAKEQLVDRLKQLKGVEVRVVEAGQADGETDGTKLFGALTSALSDVPTDRVAGAFLITDGRVHDVPANAAA
LGFQAPVHALITGRSNERDRRIAIVAAPRFGIVGQNQTITYRLDDQGIIGERARVVVRRDGEVLNERSVASGQTVKVDVD
IKHAGANIVEIEASPVDNELTTVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKSDASVDLVHFTILRPPEKQDG
TPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPIAYFDNIARYVRNGGAVLVSAGPDYASTTSIWRTPLDSLLP
AEPVGVTEKPYTAQLSDAGKRHPVTRALEGSNSEPPKWSRFFRTIDTRNATTPPLMTGADNMPLLLLSHYGEGRVALLLS
DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLRVEGKDLQVIRQTMADNVPPVTVTSPSGQTRQLTLAPSDP
GIWRTTLPADELGLWAASDGTLKALINVGPVNPKEFSEVTSTAETLKPLALATGGDARRIADGGSVELPRIVPVQSATLF
RGDGWLGVRMRDASVVRGVGVLPVFTGLIGLLLLLGAFAATWLREGR
>Mature_687_residues
MQYGIAFAPLVPTLVLWGALAAIAVIAIVLLLGRSRGAWVRIAALALILLALSNPSFTREEREPLSSVAAVVVDKSPSQN
FGTRAAEADQAKEQLVDRLKQLKGVEVRVVEAGQADGETDGTKLFGALTSALSDVPTDRVAGAFLITDGRVHDVPANAAA
LGFQAPVHALITGRSNERDRRIAIVAAPRFGIVGQNQTITYRLDDQGIIGERARVVVRRDGEVLNERSVASGQTVKVDVD
IKHAGANIVEIEASPVDNELTTVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKSDASVDLVHFTILRPPEKQDG
TPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPIAYFDNIARYVRNGGAVLVSAGPDYASTTSIWRTPLDSLLP
AEPVGVTEKPYTAQLSDAGKRHPVTRALEGSNSEPPKWSRFFRTIDTRNATTPPLMTGADNMPLLLLSHYGEGRVALLLS
DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLRVEGKDLQVIRQTMADNVPPVTVTSPSGQTRQLTLAPSDP
GIWRTTLPADELGLWAASDGTLKALINVGPVNPKEFSEVTSTAETLKPLALATGGDARRIADGGSVELPRIVPVQSATLF
RGDGWLGVRMRDASVVRGVGVLPVFTGLIGLLLLLGAFAATWLREGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74424; Mature: 74424

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYGIAFAPLVPTLVLWGALAAIAVIAIVLLLGRSRGAWVRIAALALILLALSNPSFTRE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHH
EREPLSSVAAVVVDKSPSQNFGTRAAEADQAKEQLVDRLKQLKGVEVRVVEAGQADGETD
HHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
GTKLFGALTSALSDVPTDRVAGAFLITDGRVHDVPANAAALGFQAPVHALITGRSNERDR
HHHHHHHHHHHHHCCCCHHHCCEEEEECCEEECCCCCHHHHCCCCCEEEEEECCCCCCCC
RIAIVAAPRFGIVGQNQTITYRLDDQGIIGERARVVVRRDGEVLNERSVASGQTVKVDVD
EEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEECCCCHHCCCCCCCCCEEEEEEE
IKHAGANIVEIEASPVDNELTTVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKS
EEECCCCEEEEECCCCCCCCEEECCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHC
DASVDLVHFTILRPPEKQDGTPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPI
CCCEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCEEEEEEEHHHHCCCCCH
AYFDNIARYVRNGGAVLVSAGPDYASTTSIWRTPLDSLLPAEPVGVTEKPYTAQLSDAGK
HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCC
RHPVTRALEGSNSEPPKWSRFFRTIDTRNATTPPLMTGADNMPLLLLSHYGEGRVALLLS
CCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEEEE
DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLRVEGKDLQVIRQTMADNVPP
CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHHHHHHCCCCC
VTVTSPSGQTRQLTLAPSDPGIWRTTLPADELGLWAASDGTLKALINVGPVNPKEFSEVT
EEEECCCCCCEEEEECCCCCCCEEECCCHHHCCEEEECCCCEEEEEECCCCCHHHHHHHH
STAETLKPLALATGGDARRIADGGSVELPRIVPVQSATLFRGDGWLGVRMRDASVVRGVG
HHHHHHCCEEEECCCCCCEECCCCCCCCCEEEECCCCEEEECCCEEEEEEECCHHHHCCC
VLPVFTGLIGLLLLLGAFAATWLREGR
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQYGIAFAPLVPTLVLWGALAAIAVIAIVLLLGRSRGAWVRIAALALILLALSNPSFTRE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHH
EREPLSSVAAVVVDKSPSQNFGTRAAEADQAKEQLVDRLKQLKGVEVRVVEAGQADGETD
HHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
GTKLFGALTSALSDVPTDRVAGAFLITDGRVHDVPANAAALGFQAPVHALITGRSNERDR
HHHHHHHHHHHHHCCCCHHHCCEEEEECCEEECCCCCHHHHCCCCCEEEEEECCCCCCCC
RIAIVAAPRFGIVGQNQTITYRLDDQGIIGERARVVVRRDGEVLNERSVASGQTVKVDVD
EEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEECCCCHHCCCCCCCCCEEEEEEE
IKHAGANIVEIEASPVDNELTTVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKS
EEECCCCEEEEECCCCCCCCEEECCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHC
DASVDLVHFTILRPPEKQDGTPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPI
CCCEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCEEEEEEEHHHHCCCCCH
AYFDNIARYVRNGGAVLVSAGPDYASTTSIWRTPLDSLLPAEPVGVTEKPYTAQLSDAGK
HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCC
RHPVTRALEGSNSEPPKWSRFFRTIDTRNATTPPLMTGADNMPLLLLSHYGEGRVALLLS
CCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEECCCCEEEEEEE
DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLRVEGKDLQVIRQTMADNVPP
CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHHHHHHCCCCC
VTVTSPSGQTRQLTLAPSDPGIWRTTLPADELGLWAASDGTLKALINVGPVNPKEFSEVT
EEEECCCCCCEEEEECCCCCCCEEECCCHHHCCEEEECCCCEEEEEECCCCCHHHHHHHH
STAETLKPLALATGGDARRIADGGSVELPRIVPVQSATLFRGDGWLGVRMRDASVVRGVG
HHHHHHCCEEEECCCCCCEECCCCCCCCCEEEECCCCEEEECCCEEEEEEECCHHHHCCC
VLPVFTGLIGLLLLLGAFAATWLREGR
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA