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The map label for this gene is yjcC [C]

Identifier: 86748308

GI number: 86748308

Start: 1356056

End: 1357528

Strand: Reverse

Name: yjcC [C]

Synonym: RPB_1183

Alternate gene names: 86748308

Gene position: 1357528-1356056 (Counterclockwise)

Preceding gene: 86748309

Following gene: 86748307

Centisome position: 25.46

GC content: 69.11

Gene sequence:

>1473_bases
ATGATCCGAATCTCGACCATTTTCATCGCCATCTGCATGGCGCTGATCTCCGCGTCGCTGGGCGCGGTGGTGTATGCGCT
CGCCGGCTTCAATGCGGTCGAATCCGCGATCGTGGCGCTGGCGACGCTGAGCCTGTTCATTCTGTACAATGCCGTCTCGA
TCCGGCTGCGCGACCGCTCCGACGCCGGTCACCAGATCGCCGATCTGTCGCGCGGCACCGCGGATCTCGCCCGCCAGATC
GCCGAATTCGGCCGCCGGCTCGCTGCGGTCGAAGGCAAAGTGATGGCCGCCAATGCGGCCAGCCAGGACCGCACCCAGGT
CGCCATGAACGAGATCGGCGAACTCGGGCTGCTGGTCAAGCAGCTCGCCGCCTCGGTCGCCACCCACGAAGACATGCTGA
ATTCCGCCGCGACGGGCGCCGCACCGCGCCGGCCGCCGATGCTCGATCCGGAAGCCCGCGTCGAGGATCAGCAGACGGCC
CAGCCCGCCGCCGAGCCGCTCGCCCTGACCGAACTGGTCTCGGCCACCGTCACCGCCCTGCCGGCAACGCCGAAGCCGGC
GCGTGATCCGGCGCAGGTTCTGGTCGCGGTGAAAACCGCGATCGAGACCGGCCGGCTCGACATCTATCTGCAACCGCTGG
TGAGCCTACCGCAACGCAAGGTGCGGTTCTACGAGATCGTGACGCGGCTGCGCGACGGCAACGACCAGATCCTCGCCGCC
GGCGAATTTCTCACCGTCGCCGAGACCGCCGGGCTGATGGGCCGGATCGACCATGCGGTGATGCTGCGCGCCGTCCAGGT
GCTGCGGCGGCTGATGGTGCGCAACAAGGACGTCGGCGTGTTCGTCAATATCGCCGCCGCGACCCTGTCGGATGCCGAAT
CGTTCGCCCAGTGCCTCGATTTTCTCGAGGCCAACAAGGCGCTGGCGCCGTCCTTCGTGCTGGAGTTCAAGCAGAGCACG
CTGCGCAACCTCGGGCCGCTCGAAACCGAGCACCTCGCGGCGCTGGCGCAACGCGGCTTCCGGTTCTCGATCGACCACGT
CACCGATCTGCGGTTCGAGCCGCGCGACCTCGCCGACCGCGGCGTCCGCTTCATCAAGGTTCCGGCGGCGCTGCTGCTCG
ACCAGCGCGAGCATCCGGTCGCCGACATCCACCCCGCCGATCTGTCCGACCTGCTCGGCCGGTTCGGCATCGATCTGATC
GCCGAGCGGATCGAGGGCGAGCGCGCGGTGGTCGACCTGCTTGACTACGATGTGCGGTTTGGGCAGGGGTTCTTGTTCGC
AGCGCCCCGTCCGCTGCGCCCCGAGACCGCCCCATCGCCTGCGCCCCCTACTCCCGGCGACAAGGCCAAGCAGGACATCG
CCCCTCCGTATGATCCAGGCTCCTCCCCGAAGGGCGAACCCGCCCGGATCGATCCGCCGCGCGCCGCGACCGGCCTCGCG
GCGCTCGCGCGCCGTGCCGTCGGCCCGGCCTGA

Upstream 100 bases:

>100_bases
TGACGCTGCCGCCTGGTTCCCCGGTTGCGGCGGACGAATCCTTTGGACTCGTCCGCCGAATCACCAATGATGGCGGGATC
GTCAGGAACAGCGGCGCTGG

Downstream 100 bases:

>100_bases
CCGCTTTTTCGCATGACCACGCTGCGTTTCGTCGAGCACCTGCGCGAGCTGGTGGGATCGGTCGATGTCGTGCTGAGCGA
CATCTGGGGCGTCGTGCATA

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: EAL Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase; Cyclic Diguanylate Phosphodiesterase Domain Protein; Cylclic Diguanylate Phosphodiesterase; Signal Transduction Protein; Eal/Pas/Ggdef Domain Protein; Diguanylate Phosphodiesterase Domain Protein; Two-Component Response Regulator; Pas Sensor Diguanylate Cyclase/Phophodiesterase; Diguanylate Cyclase; Diguanylate Cyclase/Phosphodiesterase With GAF Sensor; Sensory Box Protein; Diguanylate Phophodiesterase; Developmental Regulator MorA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MIRISTIFIAICMALISASLGAVVYALAGFNAVESAIVALATLSLFILYNAVSIRLRDRSDAGHQIADLSRGTADLARQI
AEFGRRLAAVEGKVMAANAASQDRTQVAMNEIGELGLLVKQLAASVATHEDMLNSAATGAAPRRPPMLDPEARVEDQQTA
QPAAEPLALTELVSATVTALPATPKPARDPAQVLVAVKTAIETGRLDIYLQPLVSLPQRKVRFYEIVTRLRDGNDQILAA
GEFLTVAETAGLMGRIDHAVMLRAVQVLRRLMVRNKDVGVFVNIAAATLSDAESFAQCLDFLEANKALAPSFVLEFKQST
LRNLGPLETEHLAALAQRGFRFSIDHVTDLRFEPRDLADRGVRFIKVPAALLLDQREHPVADIHPADLSDLLGRFGIDLI
AERIEGERAVVDLLDYDVRFGQGFLFAAPRPLRPETAPSPAPPTPGDKAKQDIAPPYDPGSSPKGEPARIDPPRAATGLA
ALARRAVGPA

Sequences:

>Translated_490_residues
MIRISTIFIAICMALISASLGAVVYALAGFNAVESAIVALATLSLFILYNAVSIRLRDRSDAGHQIADLSRGTADLARQI
AEFGRRLAAVEGKVMAANAASQDRTQVAMNEIGELGLLVKQLAASVATHEDMLNSAATGAAPRRPPMLDPEARVEDQQTA
QPAAEPLALTELVSATVTALPATPKPARDPAQVLVAVKTAIETGRLDIYLQPLVSLPQRKVRFYEIVTRLRDGNDQILAA
GEFLTVAETAGLMGRIDHAVMLRAVQVLRRLMVRNKDVGVFVNIAAATLSDAESFAQCLDFLEANKALAPSFVLEFKQST
LRNLGPLETEHLAALAQRGFRFSIDHVTDLRFEPRDLADRGVRFIKVPAALLLDQREHPVADIHPADLSDLLGRFGIDLI
AERIEGERAVVDLLDYDVRFGQGFLFAAPRPLRPETAPSPAPPTPGDKAKQDIAPPYDPGSSPKGEPARIDPPRAATGLA
ALARRAVGPA
>Mature_490_residues
MIRISTIFIAICMALISASLGAVVYALAGFNAVESAIVALATLSLFILYNAVSIRLRDRSDAGHQIADLSRGTADLARQI
AEFGRRLAAVEGKVMAANAASQDRTQVAMNEIGELGLLVKQLAASVATHEDMLNSAATGAAPRRPPMLDPEARVEDQQTA
QPAAEPLALTELVSATVTALPATPKPARDPAQVLVAVKTAIETGRLDIYLQPLVSLPQRKVRFYEIVTRLRDGNDQILAA
GEFLTVAETAGLMGRIDHAVMLRAVQVLRRLMVRNKDVGVFVNIAAATLSDAESFAQCLDFLEANKALAPSFVLEFKQST
LRNLGPLETEHLAALAQRGFRFSIDHVTDLRFEPRDLADRGVRFIKVPAALLLDQREHPVADIHPADLSDLLGRFGIDLI
AERIEGERAVVDLLDYDVRFGQGFLFAAPRPLRPETAPSPAPPTPGDKAKQDIAPPYDPGSSPKGEPARIDPPRAATGLA
ALARRAVGPA

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52599; Mature: 52599

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRISTIFIAICMALISASLGAVVYALAGFNAVESAIVALATLSLFILYNAVSIRLRDRS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
DAGHQIADLSRGTADLARQIAEFGRRLAAVEGKVMAANAASQDRTQVAMNEIGELGLLVK
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
QLAASVATHEDMLNSAATGAAPRRPPMLDPEARVEDQQTAQPAAEPLALTELVSATVTAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHC
PATPKPARDPAQVLVAVKTAIETGRLDIYLQPLVSLPQRKVRFYEIVTRLRDGNDQILAA
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHCCHHHHHHHHHHHHHHHCCCCCEEEC
GEFLTVAETAGLMGRIDHAVMLRAVQVLRRLMVRNKDVGVFVNIAAATLSDAESFAQCLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
FLEANKALAPSFVLEFKQSTLRNLGPLETEHLAALAQRGFRFSIDHVTDLRFEPRDLADR
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCHHCCCCCCHHHHHC
GVRFIKVPAALLLDQREHPVADIHPADLSDLLGRFGIDLIAERIEGERAVVDLLDYDVRF
CCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GQGFLFAAPRPLRPETAPSPAPPTPGDKAKQDIAPPYDPGSSPKGEPARIDPPRAATGLA
CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ALARRAVGPA
HHHHHHCCCC
>Mature Secondary Structure
MIRISTIFIAICMALISASLGAVVYALAGFNAVESAIVALATLSLFILYNAVSIRLRDRS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
DAGHQIADLSRGTADLARQIAEFGRRLAAVEGKVMAANAASQDRTQVAMNEIGELGLLVK
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
QLAASVATHEDMLNSAATGAAPRRPPMLDPEARVEDQQTAQPAAEPLALTELVSATVTAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHC
PATPKPARDPAQVLVAVKTAIETGRLDIYLQPLVSLPQRKVRFYEIVTRLRDGNDQILAA
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHCCHHHHHHHHHHHHHHHCCCCCEEEC
GEFLTVAETAGLMGRIDHAVMLRAVQVLRRLMVRNKDVGVFVNIAAATLSDAESFAQCLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
FLEANKALAPSFVLEFKQSTLRNLGPLETEHLAALAQRGFRFSIDHVTDLRFEPRDLADR
HHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCHHCCCCCCHHHHHC
GVRFIKVPAALLLDQREHPVADIHPADLSDLLGRFGIDLIAERIEGERAVVDLLDYDVRF
CCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GQGFLFAAPRPLRPETAPSPAPPTPGDKAKQDIAPPYDPGSSPKGEPARIDPPRAATGLA
CCCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ALARRAVGPA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA