| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is crp [C]
Identifier: 86748283
GI number: 86748283
Start: 1328703
End: 1329377
Strand: Direct
Name: crp [C]
Synonym: RPB_1158
Alternate gene names: 86748283
Gene position: 1328703-1329377 (Clockwise)
Preceding gene: 86748282
Following gene: 86748284
Centisome position: 24.92
GC content: 70.96
Gene sequence:
>675_bases ATGAGCTTGCCAGATCTCGGCTGGTTGCAGCGCTTCCCGGCTCTGGCTGGAATGCCCGAGGCCGAGCGCGCGCCGCTGAC CGGCGGCGCCATGGCGATGAGCCTTCCCGCCGGCACCACGGTGTTCGCGCCGGATCAGCCCTGCAGCATGTTCATCCTCG TCACCGTCGGCACGGTGCGGGTGTTTCAGCTCGACGCCGAGGGCAACGAGATCGTGCTGTACCGGCTCGGTCCCGGCAGC ATCTGCATTCTCACCACGCTGGCGCTGCTCGCCTGCGACAGCTACAGCGCCTTCGCCGTCACCGAGACGCCGGTCGAGGC GGTCGGCCTGCCGGCGGCCACCTTCAACGAGCTGATGGCGCGCTCGGCGCAGTTCCGCAGCTTCGTGTTCAACGCCCAGG CGGCGCGGATGGCCGACCTGATGGCGGTGATCCAGAACGTCGCCTTCGCCTCGATCGACTCCCGCCTCGCGGCGCGGCTG CTCGCACTCGCCGACGACAGCCGCGGGCTGTCGATCACGCATCAGCAGCTCGCCGCCGAGATCGGCACCGCGCGCGAAGT CGTCAGCCGACATCTCAAGACCTTCGAGCGCCGCGGCTGGGTCAGCCTCGGCCGCGGCCGGGTCGAACTGCGCAACGCCG CGCCGTTGCGCGCCGCGGCCCAGGCCGGCCGCTGA
Upstream 100 bases:
>100_bases AGCCGCGGCGGTTCGCCGCCGCCGCCCGTTGACAAGGATCAAACGCCCGCCGAATGCTATACGGCATACGAGTAGCAGGG TGTGGTGAACGGCGGTCGTG
Downstream 100 bases:
>100_bases GCCGCCCGCCGGTCGCGGGCGGTGACTTCGTCACAGACCGTGTGCCCAGCGTCCCTTACACGTCGAGTGTCACTCAACCA AGCGAGGGGAATTCAAGATG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; CRP Family Transcriptional Regulator; Transcriptional Regulator Crp Family Protein; Transcription Regulator Nnr-Type; Transcriptional Regulator Nnr-Like; Transcriptional Regulator Crp-Fnr Family
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSLPDLGWLQRFPALAGMPEAERAPLTGGAMAMSLPAGTTVFAPDQPCSMFILVTVGTVRVFQLDAEGNEIVLYRLGPGS ICILTTLALLACDSYSAFAVTETPVEAVGLPAATFNELMARSAQFRSFVFNAQAARMADLMAVIQNVAFASIDSRLAARL LALADDSRGLSITHQQLAAEIGTAREVVSRHLKTFERRGWVSLGRGRVELRNAAPLRAAAQAGR
Sequences:
>Translated_224_residues MSLPDLGWLQRFPALAGMPEAERAPLTGGAMAMSLPAGTTVFAPDQPCSMFILVTVGTVRVFQLDAEGNEIVLYRLGPGS ICILTTLALLACDSYSAFAVTETPVEAVGLPAATFNELMARSAQFRSFVFNAQAARMADLMAVIQNVAFASIDSRLAARL LALADDSRGLSITHQQLAAEIGTAREVVSRHLKTFERRGWVSLGRGRVELRNAAPLRAAAQAGR >Mature_223_residues SLPDLGWLQRFPALAGMPEAERAPLTGGAMAMSLPAGTTVFAPDQPCSMFILVTVGTVRVFQLDAEGNEIVLYRLGPGSI CILTTLALLACDSYSAFAVTETPVEAVGLPAATFNELMARSAQFRSFVFNAQAARMADLMAVIQNVAFASIDSRLAARLL ALADDSRGLSITHQQLAAEIGTAREVVSRHLKTFERRGWVSLGRGRVELRNAAPLRAAAQAGR
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23892; Mature: 23761
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPDLGWLQRFPALAGMPEAERAPLTGGAMAMSLPAGTTVFAPDQPCSMFILVTVGTVR CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECEEE VFQLDAEGNEIVLYRLGPGSICILTTLALLACDSYSAFAVTETPVEAVGLPAATFNELMA EEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHH RSAQFRSFVFNAQAARMADLMAVIQNVAFASIDSRLAARLLALADDSRGLSITHQQLAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH IGTAREVVSRHLKTFERRGWVSLGRGRVELRNAAPLRAAAQAGR HHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHCCC >Mature Secondary Structure SLPDLGWLQRFPALAGMPEAERAPLTGGAMAMSLPAGTTVFAPDQPCSMFILVTVGTVR CCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECEEE VFQLDAEGNEIVLYRLGPGSICILTTLALLACDSYSAFAVTETPVEAVGLPAATFNELMA EEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHH RSAQFRSFVFNAQAARMADLMAVIQNVAFASIDSRLAARLLALADDSRGLSITHQQLAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH IGTAREVVSRHLKTFERRGWVSLGRGRVELRNAAPLRAAAQAGR HHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA