| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747914
Identifier: 86747914
GI number: 86747914
Start: 883066
End: 884331
Strand: Direct
Name: 86747914
Synonym: RPB_0788
Alternate gene names: NA
Gene position: 883066-884331 (Clockwise)
Preceding gene: 86747912
Following gene: 86747915
Centisome position: 16.56
GC content: 63.74
Gene sequence:
>1266_bases ATGACTGCCGTCGTCTCGTCCGTCGCCGAACAGACCGCAGGAGCGCCGCCGGGAGGCTTGCCGCCGACGGACGCTGCCGC GCTGTCGTCGCCGCCGCTGCAGCCGGAGCTGCGCAAGCCGGCGCCGAAGCGGGAATTGCGGCTCGATCTGTTCCGCGGCC TGGCGCTGTGGCTGATCTTCATCGATCATCTGCCGGCCAATGTGCTGACCTGGCTGACGATCCGGAACTACGGCTTTTCC GACGCCACCGAGATCTTCATCTTCATTTCCGGCTACACCGCCGCTTTCGTCTACGGACGGGCGATGCGCGATCAGGGCGT GGTGGTGGCGTCGGCGCGGATCATGAAGCGGGTCTGGCAGATCTATGTCGCCCACGTGTTTCTGTTCACGATCTTCCTCG CCGAGATCTCCTACGTCGCCACCAGCTTCCAGAACCCGCTCTACACCGAGGAAATGGGCATCCTGGATTTCCTCAAACAG CCCGACGTCACCATCGTGCAGGCGCTGCTGCTGCGGTTTCGCCCGGTCAATATGGACGTGCTGCCGCTGTACATCGTGCT GATGTTCTTCCTGCCGCCGATCCTGTGGACGATGCGGCGCTCGCCCGATCTGGCGCTGGCGCTGTCGACCGCGCTCTATG TCGCGACCTGGCAGTTCGACCTGCACCTCACCGCCTATCCGAGCGGCGTCTGGGCGTTCAATCCCTACGCATGGCAGTTG CTGTTCGTGTTCGGCGCCTGGTGCGCGATGGGCGGCGCGCAGCGGCTGTCGCGGGTGCTGGCGTCGAACATCACGCTGGG GTTGTCGGTGGCCTATCTGCTGGCGGCGTTCTTCATCGTGCTGACCTGGCACATGCCGCAGCTCTATCACATCCTGCCGA AATGGCTCGAGCAGTGGATGTACCCGATCGACAAGCCCAATCTCGACGTGCTGCGGTTCGCCCACTTCCTGGCGCTGGCG GCGATCACCGTGCGGTTTCTGCCCCGCGACTGGCCCGGCCTCAATTCGGTCTGGCTGCGGCCGATGGTGCTGTGCGGCCA GCATTCGCTGGAAATCTTCTGCCTCGGCATCTTCCTTGCATTCGCGGGCTACTTCATATTGGCCGAGATCTCCGGCGGAG CGGTGATGCATTTCTTCGTCAGTCTGGCCGGCGTCGTTATCATGTCCGCCTCGGCATGGCTGCTTTCGTGGTACAAGAAC GCGGTGGCGAAGGGCGGCAATCAGAAAACAAGCCCGGATGCCGACCTCGCAGGGGGGGATGCATGA
Upstream 100 bases:
>100_bases TTCCGGTTCAAAATCAGGGACGGAGCTCCGGATTCCTGATCCGAGAACATGTGCGCCATGGCGAGGATTCGCCGGTTCGG AAACCCCGGTTCGAAAACCC
Downstream 100 bases:
>100_bases GGGCGGGCGGAATGGCCGGCTTGGGATGGATGCTGGGCTTGGCCCTGCTCGGCGCGCTCGCGGCGCCGGCCGGCGCTGCG GCCGAGACGTCCCCGCAGGG
Product: putative OpgC protein
Products: NA
Alternate protein names: Transmembrane Protein; Acyltransferase Family Protein; Transmembrane Protein OpgC
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIFIDHLPANVLTWLTIRNYGFS DATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQIYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQ PDVTIVQALLLRFRPVNMDVLPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWMYPIDKPNLDVLRFAHFLALA AITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLAFAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKN AVAKGGNQKTSPDADLAGGDA
Sequences:
>Translated_421_residues MTAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIFIDHLPANVLTWLTIRNYGFS DATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQIYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQ PDVTIVQALLLRFRPVNMDVLPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWMYPIDKPNLDVLRFAHFLALA AITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLAFAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKN AVAKGGNQKTSPDADLAGGDA >Mature_420_residues TAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIFIDHLPANVLTWLTIRNYGFSD ATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQIYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQP DVTIVQALLLRFRPVNMDVLPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQLL FVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWMYPIDKPNLDVLRFAHFLALAA ITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLAFAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKNA VAKGGNQKTSPDADLAGGDA
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47032; Mature: 46901
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIF CHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH IDHLPANVLTWLTIRNYGFSDATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQ HHHCCHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHH IYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQPDVTIVQALLLRFRPVNMDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH LPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCEEECHHHHHH LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWM HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YPIDKPNLDVLRFAHFLALAAITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH FAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKNAVAKGGNQKTSPDADLAGGD HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure TAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIF HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH IDHLPANVLTWLTIRNYGFSDATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQ HHHCCHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHH IYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQPDVTIVQALLLRFRPVNMDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH LPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCEEECHHHHHH LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWM HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YPIDKPNLDVLRFAHFLALAAITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH FAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKNAVAKGGNQKTSPDADLAGGD HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA