| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is hslO [H]
Identifier: 86747911
GI number: 86747911
Start: 878976
End: 880031
Strand: Direct
Name: hslO [H]
Synonym: RPB_0785
Alternate gene names: 86747911
Gene position: 878976-880031 (Clockwise)
Preceding gene: 86747910
Following gene: 86747912
Centisome position: 16.49
GC content: 70.17
Gene sequence:
>1056_bases ATGACCTCGCAATCGCAAAATCCCAAGACCTCCGAAGCGCCCCCGGTGCGCGCGCCCTCCGCAGTTCCGATCGACGACGC GGTGCTGCCTTTCGAAGTCGGCCCGCTCGATCTGCGCGGCCGGCTGACGCGGCTCGGCCCGGCGCTCGACGAGCTGCTGG AAAAGCACGCTTATCCCACGCCGGTCGCCAAACTGCTCGGCGAGGCGATCGTGCTGGCGACGCTGCTCGGCTCGGCGCTG AAATTCGACGGCCGCTTCATCCTGCAGACCCAGACCGACGGCCCGGTGTCGTTCCTGATCGTCGATTTCCAGGCGCCCGA CCGGCTCCGCGCCTATGCGCGGTTCGACGCCGGCAAGCTCGTGCCCGGGCTGGATTCCGGTGCGCTGCTCGGCAAGGGGC ATCTGGCGATGACGATCGACCAGGGCGCCGACATGCGCCGCTATCAGGGCCTGGTCGCGCTCGACGGCGGCGGGCTGGAA GAGGCCGCGCACGAATACTTCATGCGCTCCGAGCAGATCCCCACCAAGGTCCGGCTCGCGGTCGGCGAGGAGTGGCGCGG CGGCGAGGGCGGCCGGCACCACTGGCGCGCCGGCGGCATGCTGCTGCAATTCCTGCCGAAGGCGCCGGAGCGCGCGCGGC CGGCCGATCTGCATCCCGGCGACGCGCCGGACGGCGCCGAGGTCCACGCCGTCACCGAGGACGACGCCTGGGTCGAAGGC CAGTCGCTGATCGCCACCGTCGAGGACATCGAACTGATCGACCCGGATCTGTCCGGCGAGCGGCTGCTGTACCGGCTGTT CCACGAACGCGGCGTCCGCGTATTCTCGTCGCTGCCGTTGCGCGCGCAATGCTCCTGCTCGCGCACCGCCGTCTCCGGCA TGCTGTCCCGCTTCTCGGCCCAGGACCGCGCCGACATGGTCAAGGACGGCAAGGTCGTGGTGACCTGTGAGTTCTGCAGC TCGGTCTACGAGTTCACGCCGGACGAGGCGGGGGTGGAAACGGGCGCCGGCGTCGCGGACGCAGAAACGACGAACGGCGC GGCGACGAACGAGTAG
Upstream 100 bases:
>100_bases AAGTCGGCGAGCACCTCAGGGTGACGGCACTCCTCTTCCGGAACTGCATCCCTCGCATGAGGCCCTTCCGATTTCGTCCT CCGCCCCCAGATAGAGCGCC
Downstream 100 bases:
>100_bases TTCACCCGTCGTCGAGAAATAACCCGTGTCCCGGACGCGATGCAGCACGCAGTGCTGCTTCGCAGATCCGGGACCCCGGT TTCTCTGTCCAACACGACAT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTSQSQNPKTSEAPPVRAPSAVPIDDAVLPFEVGPLDLRGRLTRLGPALDELLEKHAYPTPVAKLLGEAIVLATLLGSAL KFDGRFILQTQTDGPVSFLIVDFQAPDRLRAYARFDAGKLVPGLDSGALLGKGHLAMTIDQGADMRRYQGLVALDGGGLE EAAHEYFMRSEQIPTKVRLAVGEEWRGGEGGRHHWRAGGMLLQFLPKAPERARPADLHPGDAPDGAEVHAVTEDDAWVEG QSLIATVEDIELIDPDLSGERLLYRLFHERGVRVFSSLPLRAQCSCSRTAVSGMLSRFSAQDRADMVKDGKVVVTCEFCS SVYEFTPDEAGVETGAGVADAETTNGAATNE
Sequences:
>Translated_351_residues MTSQSQNPKTSEAPPVRAPSAVPIDDAVLPFEVGPLDLRGRLTRLGPALDELLEKHAYPTPVAKLLGEAIVLATLLGSAL KFDGRFILQTQTDGPVSFLIVDFQAPDRLRAYARFDAGKLVPGLDSGALLGKGHLAMTIDQGADMRRYQGLVALDGGGLE EAAHEYFMRSEQIPTKVRLAVGEEWRGGEGGRHHWRAGGMLLQFLPKAPERARPADLHPGDAPDGAEVHAVTEDDAWVEG QSLIATVEDIELIDPDLSGERLLYRLFHERGVRVFSSLPLRAQCSCSRTAVSGMLSRFSAQDRADMVKDGKVVVTCEFCS SVYEFTPDEAGVETGAGVADAETTNGAATNE >Mature_350_residues TSQSQNPKTSEAPPVRAPSAVPIDDAVLPFEVGPLDLRGRLTRLGPALDELLEKHAYPTPVAKLLGEAIVLATLLGSALK FDGRFILQTQTDGPVSFLIVDFQAPDRLRAYARFDAGKLVPGLDSGALLGKGHLAMTIDQGADMRRYQGLVALDGGGLEE AAHEYFMRSEQIPTKVRLAVGEEWRGGEGGRHHWRAGGMLLQFLPKAPERARPADLHPGDAPDGAEVHAVTEDDAWVEGQ SLIATVEDIELIDPDLSGERLLYRLFHERGVRVFSSLPLRAQCSCSRTAVSGMLSRFSAQDRADMVKDGKVVVTCEFCSS VYEFTPDEAGVETGAGVADAETTNGAATNE
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=305, Percent_Identity=31.1475409836066, Blast_Score=142, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 37773; Mature: 37642
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQSQNPKTSEAPPVRAPSAVPIDDAVLPFEVGPLDLRGRLTRLGPALDELLEKHAYPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCC PVAKLLGEAIVLATLLGSALKFDGRFILQTQTDGPVSFLIVDFQAPDRLRAYARFDAGKL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCCC VPGLDSGALLGKGHLAMTIDQGADMRRYQGLVALDGGGLEEAAHEYFMRSEQIPTKVRLA CCCCCCCCEEECCCEEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEE VGEEWRGGEGGRHHWRAGGMLLQFLPKAPERARPADLHPGDAPDGAEVHAVTEDDAWVEG ECCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECC QSLIATVEDIELIDPDLSGERLLYRLFHERGVRVFSSLPLRAQCSCSRTAVSGMLSRFSA CHHEEEEHHHEEECCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHCC QDRADMVKDGKVVVTCEFCSSVYEFTPDEAGVETGAGVADAETTNGAATNE HHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSQSQNPKTSEAPPVRAPSAVPIDDAVLPFEVGPLDLRGRLTRLGPALDELLEKHAYPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCC PVAKLLGEAIVLATLLGSALKFDGRFILQTQTDGPVSFLIVDFQAPDRLRAYARFDAGKL HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCCC VPGLDSGALLGKGHLAMTIDQGADMRRYQGLVALDGGGLEEAAHEYFMRSEQIPTKVRLA CCCCCCCCEEECCCEEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEE VGEEWRGGEGGRHHWRAGGMLLQFLPKAPERARPADLHPGDAPDGAEVHAVTEDDAWVEG ECCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECC QSLIATVEDIELIDPDLSGERLLYRLFHERGVRVFSSLPLRAQCSCSRTAVSGMLSRFSA CHHEEEEHHHEEECCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHCC QDRADMVKDGKVVVTCEFCSSVYEFTPDEAGVETGAGVADAETTNGAATNE HHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA