| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is flgE [H]
Identifier: 86747891
GI number: 86747891
Start: 858206
End: 859471
Strand: Direct
Name: flgE [H]
Synonym: RPB_0765
Alternate gene names: 86747891
Gene position: 858206-859471 (Clockwise)
Preceding gene: 86747890
Following gene: 86747892
Centisome position: 16.1
GC content: 65.72
Gene sequence:
>1266_bases ATGAGTTTGTCAGGCGCACTTTCGTCCGCGATCTCCGCGTTGAACGCGCAGAGTTCGGCGCTGGCGATGATCTCCGACAA CATCGCGAATTCGTCGACGGTCGGCTACAAGACCTCCTCGGCCTCGTTCGAGTCGCTGGTCACCAACACGTCGGGCGCGT CGTCCTACTCGTCCGGCGGCGTCACGGCGTCGGCGACGTCGAACATCACCACGCAGGGCCTGCTGACCTCGACCACGACG GCGACCAACATCGCGATCCAGGGCAACGGCTTCTTTCCGGTGACGACGTCGCTCACCGGCGGATCGACGCTCTACACCAG GAACGGCGCGTTCACGATCGATTCCGACGGTTATCTCGTCAACAACGGCGCCTATCTGCTCGGCTGGCGGACCGACACCG ACGGCAACGTCATCGGCACCGCCAGCGAAGGCAATCTGGTTCCGATCGACACCAGCGTCGCCAAGACCAGCAGCGGCGCG ACCACCACGACGTCGTTCGCGGCGAATCTGCCGGCCGACGCCGCGGTCAACGACACCTTCACGACGTCGATGCCGCTGTA TGATTCGCTCGGCACGTCGAGCACGATGCAGGTGACGTGGACGAAGACCGCGGAGAACACCTGGAGCGCGAGCTTCGGCA AGCCGACGCTGGCGTCGGATTCGACCACGACGCTGGCGGCGGCGCCGACCGACACGATCTCGGTCTCGTTCAACAGCGAC GGTTCGCTGGCCAGCACCAGCCCGAGCCCGGCGACCGTCACGATCAGCGACTGGACCACCGGCGCCGCCAACAGCACGAT CACGCTCGACCTCGGCACGGTGGGCGGAAAAGACGGCCTGACGCAACTATCCTCGGACCTTTCGACGCCGGCCGTGACCA TCGACAGCATCGAGTCCGACGGCCTTGCCTTCGGCAAGCTGAGCAGCGTCGCGGTCGGCGACGACGGCACCGTCAACGCC ACCTACTCCAACGGCGAGACCATCGCGATCTACAAGATCCCGGTCGCGACCTTCACGGCGTCGGCCGAGCTGGAGGCGCA GAGCGGCGGGTTGTACGCGACCACCGCCGCGTCCGGCTCGGCGACGCTGCAGGAATCCGGCGCCAACGGCGCCGGCACGA TCTACGGCAGCGAGCTCGAATCCAGCACCACCGACACCAACGAACAATTCAGCAGCATGATCTCCGCGCAGCAGGCGTAT TCGGCCGCGTCGCAGGTCATCACGGCGGTCAACAAGATGTTCGACACCCTGATCGCGGCGATCTGA
Upstream 100 bases:
>100_bases GACAATTCCACCGGCTCGCCGAGGCTCAACATCGGCAACACCTCGGTCAGTACCGACAACGTCATCGGCGTCACCGCCTG AACCAGCCCGGAGTCACAGC
Downstream 100 bases:
>100_bases TCCGATGACCGATCGCGACAAAGACGACGAATTGTTCGTGCGGCTGGATCGCCTGGTCACCGCGGCGCGAATCCTGCGCG GCGCCGAGCGGCGCCTGATC
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGGVTASATSNITTQGLLTSTTT ATNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLVNNGAYLLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGA TTTTSFAANLPADAAVNDTFTTSMPLYDSLGTSSTMQVTWTKTAENTWSASFGKPTLASDSTTTLAAAPTDTISVSFNSD GSLASTSPSPATVTISDWTTGAANSTITLDLGTVGGKDGLTQLSSDLSTPAVTIDSIESDGLAFGKLSSVAVGDDGTVNA TYSNGETIAIYKIPVATFTASAELEAQSGGLYATTAASGSATLQESGANGAGTIYGSELESSTTDTNEQFSSMISAQQAY SAASQVITAVNKMFDTLIAAI
Sequences:
>Translated_421_residues MSLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGGVTASATSNITTQGLLTSTTT ATNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLVNNGAYLLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGA TTTTSFAANLPADAAVNDTFTTSMPLYDSLGTSSTMQVTWTKTAENTWSASFGKPTLASDSTTTLAAAPTDTISVSFNSD GSLASTSPSPATVTISDWTTGAANSTITLDLGTVGGKDGLTQLSSDLSTPAVTIDSIESDGLAFGKLSSVAVGDDGTVNA TYSNGETIAIYKIPVATFTASAELEAQSGGLYATTAASGSATLQESGANGAGTIYGSELESSTTDTNEQFSSMISAQQAY SAASQVITAVNKMFDTLIAAI >Mature_420_residues SLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGGVTASATSNITTQGLLTSTTTA TNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLVNNGAYLLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGAT TTTSFAANLPADAAVNDTFTTSMPLYDSLGTSSTMQVTWTKTAENTWSASFGKPTLASDSTTTLAAAPTDTISVSFNSDG SLASTSPSPATVTISDWTTGAANSTITLDLGTVGGKDGLTQLSSDLSTPAVTIDSIESDGLAFGKLSSVAVGDDGTVNAT YSNGETIAIYKIPVATFTASAELEAQSGGLYATTAASGSATLQESGANGAGTIYGSELESSTTDTNEQFSSMISAQQAYS AASQVITAVNKMFDTLIAAI
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=430, Percent_Identity=31.1627906976744, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1787318, Length=129, Percent_Identity=38.7596899224806, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 42146; Mature: 42015
Theoretical pI: Translated: 3.63; Mature: 3.63
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGG CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC VTASATSNITTQGLLTSTTTATNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLV EEEECCCCCEECCEEEECCCEEEEEEECCCEEEEEEECCCCCEEEECCCEEEECCCCEEE NNGAYLLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGATTTTSFAANLPADAAVNDTF ECCEEEEEEEECCCCCEEEECCCCCEEEECCHHHCCCCCCCEEEEEECCCCCCCCCCCCE TTSMPLYDSLGTSSTMQVTWTKTAENTWSASFGKPTLASDSTTTLAAAPTDTISVSFNSD ECCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCC GSLASTSPSPATVTISDWTTGAANSTITLDLGTVGGKDGLTQLSSDLSTPAVTIDSIESD CCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCC GLAFGKLSSVAVGDDGTVNATYSNGETIAIYKIPVATFTASAELEAQSGGLYATTAASGS CEEECCCCEEEECCCCEEEEEECCCCEEEEEEEEEEEEEECCEEEECCCCEEEEECCCCC ATLQESGANGAGTIYGSELESSTTDTNEQFSSMISAQQAYSAASQVITAVNKMFDTLIAA CEEHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC I C >Mature Secondary Structure SLSGALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGG CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC VTASATSNITTQGLLTSTTTATNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLV EEEECCCCCEECCEEEECCCEEEEEEECCCEEEEEEECCCCCEEEECCCEEEECCCCEEE NNGAYLLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGATTTTSFAANLPADAAVNDTF ECCEEEEEEEECCCCCEEEECCCCCEEEECCHHHCCCCCCCEEEEEECCCCCCCCCCCCE TTSMPLYDSLGTSSTMQVTWTKTAENTWSASFGKPTLASDSTTTLAAAPTDTISVSFNSD ECCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCC GSLASTSPSPATVTISDWTTGAANSTITLDLGTVGGKDGLTQLSSDLSTPAVTIDSIESD CCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCC GLAFGKLSSVAVGDDGTVNATYSNGETIAIYKIPVATFTASAELEAQSGGLYATTAASGS CEEECCCCEEEECCCCEEEEEECCCCEEEEEEEEEEEEEECCEEEECCCCEEEEECCCCC ATLQESGANGAGTIYGSELESSTTDTNEQFSSMISAQQAYSAASQVITAVNKMFDTLIAA CEEHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]