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The map label for this gene is flgD [H]

Identifier: 86747890

GI number: 86747890

Start: 857524

End: 858186

Strand: Direct

Name: flgD [H]

Synonym: RPB_0764

Alternate gene names: 86747890

Gene position: 857524-858186 (Clockwise)

Preceding gene: 86747889

Following gene: 86747891

Centisome position: 16.08

GC content: 63.8

Gene sequence:

>663_bases
ATGTCAGTTGCTGCAACAACGGCGACCACCACCACCGCCGCGACGGTCGCCTCGACCGCGTCGACCACGGCGAGCCTCAC
CTCCAACGAATTCATGACGCTGCTCATCACCGAGCTGCAGAACCAGAATCCGCTGGAGCCGACCAGCACGACCGACTTCG
TCAATCAGCTCACGTCCTACGCCAACTACGAGCAGCAGCAGACGCTGAACGCCAATCTCACCACGCTGACGACGTCGCTC
AACAGTTTGCTGACGCTGAATTCGTCGAACTACATCGGCCAGACCGTCACCGCCAAGGCCGACACCGGCACGCTGCAGGA
CGGTCAGATCGCGTTCGGCTACTCGCTGGATTCGGCGGCGTCCAGCGTCACGCTCACCGTCAAGGACTCGTCCGGCAACG
CAGTGTGGAGCGGCAGCGGCACGACGACGTCGGGCACCAACTCCTTCACCTGGGACGGCAAGACCACCGACGGCACGCAG
CTCTCGGACGGCGGTCAGTACACGCTCGAAGTCTCCGCGACCGATTCCACCGGCCAGTCGGTCTACGGCTACACCACCGT
CACCGGCAAGGTGACGGGCGTCGACAATTCCACCGGCTCGCCGAGGCTCAACATCGGCAACACCTCGGTCAGTACCGACA
ACGTCATCGGCGTCACCGCCTGA

Upstream 100 bases:

>100_bases
CCGGCAGCGCCCGTTTCACTAGGGAACGGCTTCGAGACCCTCCCCTTCACGACAGGCAGTTCCGAGGCACAGCCCGCCCG
GAATTCGCTGGAGCACGCCC

Downstream 100 bases:

>100_bases
ACCAGCCCGGAGTCACAGCATGAGTTTGTCAGGCGCACTTTCGTCCGCGATCTCCGCGTTGAACGCGCAGAGTTCGGCGC
TGGCGATGATCTCCGACAAC

Product: flagellar hook capping protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSVAATTATTTTAATVASTASTTASLTSNEFMTLLITELQNQNPLEPTSTTDFVNQLTSYANYEQQQTLNANLTTLTTSL
NSLLTLNSSNYIGQTVTAKADTGTLQDGQIAFGYSLDSAASSVTLTVKDSSGNAVWSGSGTTTSGTNSFTWDGKTTDGTQ
LSDGGQYTLEVSATDSTGQSVYGYTTVTGKVTGVDNSTGSPRLNIGNTSVSTDNVIGVTA

Sequences:

>Translated_220_residues
MSVAATTATTTTAATVASTASTTASLTSNEFMTLLITELQNQNPLEPTSTTDFVNQLTSYANYEQQQTLNANLTTLTTSL
NSLLTLNSSNYIGQTVTAKADTGTLQDGQIAFGYSLDSAASSVTLTVKDSSGNAVWSGSGTTTSGTNSFTWDGKTTDGTQ
LSDGGQYTLEVSATDSTGQSVYGYTTVTGKVTGVDNSTGSPRLNIGNTSVSTDNVIGVTA
>Mature_219_residues
SVAATTATTTTAATVASTASTTASLTSNEFMTLLITELQNQNPLEPTSTTDFVNQLTSYANYEQQQTLNANLTTLTTSLN
SLLTLNSSNYIGQTVTAKADTGTLQDGQIAFGYSLDSAASSVTLTVKDSSGNAVWSGSGTTTSGTNSFTWDGKTTDGTQL
SDGGQYTLEVSATDSTGQSVYGYTTVTGKVTGVDNSTGSPRLNIGNTSVSTDNVIGVTA

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=176, Percent_Identity=32.3863636363636, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 22563; Mature: 22432

Theoretical pI: Translated: 3.67; Mature: 3.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAATTATTTTAATVASTASTTASLTSNEFMTLLITELQNQNPLEPTSTTDFVNQLTSY
CCEEECCCCCCHHHEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
ANYEQQQTLNANLTTLTTSLNSLLTLNSSNYIGQTVTAKADTGTLQDGQIAFGYSLDSAA
CCCCHHHHCCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCC
SSVTLTVKDSSGNAVWSGSGTTTSGTNSFTWDGKTTDGTQLSDGGQYTLEVSATDSTGQS
CEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEEEECCCCCCE
VYGYTTVTGKVTGVDNSTGSPRLNIGNTSVSTDNVIGVTA
EEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEC
>Mature Secondary Structure 
SVAATTATTTTAATVASTASTTASLTSNEFMTLLITELQNQNPLEPTSTTDFVNQLTSY
CEEECCCCCCHHHEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
ANYEQQQTLNANLTTLTTSLNSLLTLNSSNYIGQTVTAKADTGTLQDGQIAFGYSLDSAA
CCCCHHHHCCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCC
SSVTLTVKDSSGNAVWSGSGTTTSGTNSFTWDGKTTDGTQLSDGGQYTLEVSATDSTGQS
CEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCCCCEECCCCEEEEEEEECCCCCCE
VYGYTTVTGKVTGVDNSTGSPRLNIGNTSVSTDNVIGVTA
EEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]