| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livH [C]
Identifier: 86747819
GI number: 86747819
Start: 779249
End: 780298
Strand: Direct
Name: livH [C]
Synonym: RPB_0693
Alternate gene names: 86747819
Gene position: 779249-780298 (Clockwise)
Preceding gene: 86747818
Following gene: 86747820
Centisome position: 14.62
GC content: 63.62
Gene sequence:
>1050_bases ATGAATGGCACGATGGCGCTGATTTTGGCGCAGGACGGACTCACGACCGGCATCATCTACGCCTTGCTGTCGTTGTCCAT CCTGCTCGTGTTTCTCGTCACGCGCATCCTATGGGTGCCCGCCGGGGAGTTCGTCACCATGGGTGCGCTGACGATGGGGA TCTTGCAGAAGAACGAAGCGCCCGCGACGGTGTGGCTGCTCGCAGCCCTGGGCGCGGTCACGCTGCTGCGTGAGGCGATT CGCTCGTTCAGAACGGGTCAGTGGAGCGGCTGGTGGCCCACCGTCGCGTTTTGCGCCGGGATTCCGGCCGTGGTCGTCGT CGCGACGCTGAAGCTGGCGCCGATGGGGCTGCCGATCTTTGCCCAGGTGCTCCTCACTCTGGCGATCACGGTGCCGATGG CGCCGATGATCTATCGAAGCGCGTTCATGGATCTCGCCGGCTCATCGGTGCTCGTCCTGCTCTTCGTCGCCGTCGCCGTG CACTATCTGTTGACGGGCCTCGGCCTCGTCTTCTTCGGACCCGACGGAATGCGCACCGCGCCGTTCATTCCGGGCCGGCT GGATATCGGCTTCACGCGTATTTCCTGGCACCTGCTGCTGGTCGTCGCGGTCGCCCTGTCGCTCACAGCGATCCTGTTCG CATTCTTCGAGCGGACGTTCTGGGGGAAATCCATGCGGGCGGTGGCCGTCAACCGGAAGGGCGCCCGGCTGGTCGGGATC AAGCCGGAAACGGCGGGAACGATCGCGTTCAGCATCGCCGGCCTGATTGGATGCCTGTCGGGAATCCTGATCGCGCCGGT CACCGGGATTTACTACGACAGCGGGTTCCTGATCGGACTGAGAGGCTTCGTCGGCGCGGTGCTGGGTGGGCTCGCGAGTT TTCCGACCGCGATCGTAGGCTCGATATTCGTCGGCCTGTTCGAGAGCTACGCATCCTTCTTCGCATCGGCTTACAAGGAA GCCATCGTATTTTCTCTTCTGGTTCCGATCCTGATCTGGCGTTCCGTCGTCGAACGGCGCCGGAGCGGATTGTCGGACGA CGCGGAGTGA
Upstream 100 bases:
>100_bases GTGATCGTCAAGAACGGCGCTTTCGCTCTGTACAAATAGTCGGTGCCGCAGACGCCACCGACAGACCGAATGCCGAACAG CAGACCATAGGTCGAGAACG
Downstream 100 bases:
>100_bases CCATGCGCTGGCTCTCGATCGCCGTCATCGGTCTGCTCTGCATCGTTCCGATCGCGTTTCCGACGTCGTATCTCACGCCG TTGAACTACGTCGGTCTGAA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid Transport System Permease Protein; Amino Acid Or Sugar ABC Transport System Permease Protein; ABC Transporter Permease; ABC Transporter ATPase Component; Branched-Chain Amino Acid Transport System Permease; Inner-Membrane TranslocatorABC Transporter ; ABC-Transporter Permease Component; Branched Chain Amino Acid ABC Transporter Permease Protein; Transmembrane Component Of ABC Transporter; Branched-Chain Amino Acid Transporter; ABC Transport Protein Inner Membrane Component; Branched-Chain Amino Acid ABC Transporter Membrane Protein; Leucine/Isoleucine/Valine Transport System Permease Protein; Branched-Chain Aminoacid ABC Transporter Permease; Amino Acid ABC Transporter Permease; Permease Of ABC Branched Chain Amino Acid Transporter; Amino Acid/Amide ABC Transporter Membrane HAAT Family; ABC Transporter Membrane Spanning Protein; Branched Amino Acid Transport System Permease
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNGTMALILAQDGLTTGIIYALLSLSILLVFLVTRILWVPAGEFVTMGALTMGILQKNEAPATVWLLAALGAVTLLREAI RSFRTGQWSGWWPTVAFCAGIPAVVVVATLKLAPMGLPIFAQVLLTLAITVPMAPMIYRSAFMDLAGSSVLVLLFVAVAV HYLLTGLGLVFFGPDGMRTAPFIPGRLDIGFTRISWHLLLVVAVALSLTAILFAFFERTFWGKSMRAVAVNRKGARLVGI KPETAGTIAFSIAGLIGCLSGILIAPVTGIYYDSGFLIGLRGFVGAVLGGLASFPTAIVGSIFVGLFESYASFFASAYKE AIVFSLLVPILIWRSVVERRRSGLSDDAE
Sequences:
>Translated_349_residues MNGTMALILAQDGLTTGIIYALLSLSILLVFLVTRILWVPAGEFVTMGALTMGILQKNEAPATVWLLAALGAVTLLREAI RSFRTGQWSGWWPTVAFCAGIPAVVVVATLKLAPMGLPIFAQVLLTLAITVPMAPMIYRSAFMDLAGSSVLVLLFVAVAV HYLLTGLGLVFFGPDGMRTAPFIPGRLDIGFTRISWHLLLVVAVALSLTAILFAFFERTFWGKSMRAVAVNRKGARLVGI KPETAGTIAFSIAGLIGCLSGILIAPVTGIYYDSGFLIGLRGFVGAVLGGLASFPTAIVGSIFVGLFESYASFFASAYKE AIVFSLLVPILIWRSVVERRRSGLSDDAE >Mature_349_residues MNGTMALILAQDGLTTGIIYALLSLSILLVFLVTRILWVPAGEFVTMGALTMGILQKNEAPATVWLLAALGAVTLLREAI RSFRTGQWSGWWPTVAFCAGIPAVVVVATLKLAPMGLPIFAQVLLTLAITVPMAPMIYRSAFMDLAGSSVLVLLFVAVAV HYLLTGLGLVFFGPDGMRTAPFIPGRLDIGFTRISWHLLLVVAVALSLTAILFAFFERTFWGKSMRAVAVNRKGARLVGI KPETAGTIAFSIAGLIGCLSGILIAPVTGIYYDSGFLIGLRGFVGAVLGGLASFPTAIVGSIFVGLFESYASFFASAYKE AIVFSLLVPILIWRSVVERRRSGLSDDAE
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37182; Mature: 37182
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTMALILAQDGLTTGIIYALLSLSILLVFLVTRILWVPAGEFVTMGALTMGILQKNEA CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC PATVWLLAALGAVTLLREAIRSFRTGQWSGWWPTVAFCAGIPAVVVVATLKLAPMGLPIF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHH AQVLLTLAITVPMAPMIYRSAFMDLAGSSVLVLLFVAVAVHYLLTGLGLVFFGPDGMRTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC PFIPGRLDIGFTRISWHLLLVVAVALSLTAILFAFFERTFWGKSMRAVAVNRKGARLVGI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCEEEEE KPETAGTIAFSIAGLIGCLSGILIAPVTGIYYDSGFLIGLRGFVGAVLGGLASFPTAIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHH SIFVGLFESYASFFASAYKEAIVFSLLVPILIWRSVVERRRSGLSDDAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNGTMALILAQDGLTTGIIYALLSLSILLVFLVTRILWVPAGEFVTMGALTMGILQKNEA CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC PATVWLLAALGAVTLLREAIRSFRTGQWSGWWPTVAFCAGIPAVVVVATLKLAPMGLPIF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHH AQVLLTLAITVPMAPMIYRSAFMDLAGSSVLVLLFVAVAVHYLLTGLGLVFFGPDGMRTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC PFIPGRLDIGFTRISWHLLLVVAVALSLTAILFAFFERTFWGKSMRAVAVNRKGARLVGI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCEEEEE KPETAGTIAFSIAGLIGCLSGILIAPVTGIYYDSGFLIGLRGFVGAVLGGLASFPTAIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHH SIFVGLFESYASFFASAYKEAIVFSLLVPILIWRSVVERRRSGLSDDAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA