| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is mnmG
Identifier: 86747517
GI number: 86747517
Start: 434355
End: 436235
Strand: Reverse
Name: mnmG
Synonym: RPB_0391
Alternate gene names: 86747517
Gene position: 436235-434355 (Counterclockwise)
Preceding gene: 86747518
Following gene: 86747516
Centisome position: 8.18
GC content: 70.44
Gene sequence:
>1881_bases ATGCGCAATTCCTACGATGTCATCGTCATTGGCGGCGGCCATGCCGGCTGCGAAGCCGCGGCTGCAGCGGCGCGGCTCGG CGCCGCCACCGCGCTGGTGACGCATCGCTTCGCCACTGTCGGCGCGATGTCGTGCAATCCGGCGATCGGCGGTCTCGGCA AGGGGCATCTGGTTCGCGAAGTCGACGCGCTGGACGGGCTGATGGGCCGGGTGGCCGATGCCGGCGGCATCCAGTTCCGG ATGCTGAACCGGCGCAAGGGCCCGGCGGTGCGCGGACCGCGCGCCCAGGCCGACCGCAAGCTCTACGCCGCCGCGATGCA GGCCGCGATCCGCGCCACCGCCAATCTCCGCGTGATCGAGGGCGAGGCGGACACGCTGCTGAACGAGGCGGGCCGGGTCA CCGGGATTCGTCTGGCTGACGGCCGCGAGCTTGTGGCCGGCGCGGTCGTCATCACCACCGGCACCTTTTTGCGCGGGCTG ATCCATCTCGGCGAACAGTGCTGGCCGGCCGGCCGGATCGATGAGGCGCCGGCGCTCGGGCTGTCGGCCTCGTTCGAGGC GCTGGGTCTCGCGCTCGGCCGCCTCAAGACCGGGACGCCGCCGCGGCTCGACGGCCGCACCATCGACTGGGGCGCGGTCG AGATGCAGCCCGGCGACGATCCGCCGGAGCCGTTCTCGGTGCTGACGCCGGCGATCACCACGCCGCAGATCGAATGCGGC ATCACCCGGACGCTGCCCGCGACCCACGAGGTGATCCGCGCCAATGTGCATCGCTCGCCGATGTATTCCGGGCAGATCCA GTCGTCGGGGCCGCGCTATTGCCCGTCGATCGAGGACAAGATCGTCAAATTCGGCGACCGCGACGGCCACCAGATCTTCC TCGAGCCGGAAGGGCTCGACGATCCGACCGTCTATCCCAACGGGATCTCGACCTCGCTGCCCGAAGAGGTGCAGCGCGCG ATCCTGGCCACGATCCCGGGCCTGGAGCGCACCGTGATGCTGCGGCCGGGCTATGCGATCGAATACGATCATGTCGATCC GCGCGAGCTGGAGCCGACGTTGCAGACCAAGCGGTTGCGCGGGCTGTATCTGGCCGGCCAGATCAACGGCACCACCGGCT ATGAAGAGGCCGCGGCGCAGGGCCTGGTCGCCGGGTTGAACGCGGCGCTGGCGGCCGGCGGCGGCGAGGGCGTCGTGTTC GACCGCGCCGACGGCTATCTCGGGGTGATGATCGACGATCTGGTGACCCGCGGTATCTCCGAGCCGTACCGGATGTTCAC TTCCCGGGCGGAGTATCGCCTGACGCTGCGGGCCGACAATGCCGATCAGCGGCTGACCGACAAGGGTCTGGCGCTGGGCT GCGTCGGGACGGAGCGGGCGGCGTTCCACCGCGGCAAAATGGCGGCGCTGGCCGAGGCCAAGGCGCTGGCGCAGTCGCTG GCGATCACGCCGAACGAGGCGGCCAGGCATGGGCTGTCGCTCAATCGCGACGGCCAGCGGCGCTCGGCGTTCGATCTGCT GTCCTATCCGGAGATCGAATGGCCGCAGGTGAGGGCGATCTGGCCGGAACTGGCGGCGGTTTCGCCGTCGATCGCCGGGC ATGTCGAGATCGACGCCAAGTATGCCGTCTATCTGGAGCGCCAGGTCGCCGACGTCGCCGCGTTCCGGCGCGATGAGGGC CTGCTGCTGACCGATGTCGACTATGCGCAGGTGCCCGGACTGTCGAACGAGGCGCGGGGCCGGCTGGAGCGGCACCGGCC ACGCACGGTCGGGCAGGCGGGTCGCCTGGACGGTATCACCCCCGCGGCGCTCGGCATTCTGGCGGCCTATCTGCGGCGAG AAGCGCGGAAGCGGCCGGCGGTGGTGGACGGCGAAGGCTAG
Upstream 100 bases:
>100_bases GGGGCTGATTCCCGGAGACCAACGCACTCGCGTTTCACGTGAAACACGGCCGAATCCAATACCGCTTCAAAGCCGGGAAA AGCTGCGCTACAAGCCGGCC
Downstream 100 bases:
>100_bases GCGAGGCCGCTGTTTCACGTGAAACAGCGCGCCGCCTCGTTTGCGGGGCCGGATCGGCTCGTTGGGCGCCTTGAAGCTCG TCGATCGACCGGCTTGGGCA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MRNSYDVIVIGGGHAGCEAAAAAARLGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAGGIQFR MLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATANLRVIEGEADTLLNEAGRVTGIRLADGRELVAGAVVITTGTFLRGL IHLGEQCWPAGRIDEAPALGLSASFEALGLALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG ITRTLPATHEVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRA ILATIPGLERTVMLRPGYAIEYDHVDPRELEPTLQTKRLRGLYLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGEGVVF DRADGYLGVMIDDLVTRGISEPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGTERAAFHRGKMAALAEAKALAQSL AITPNEAARHGLSLNRDGQRRSAFDLLSYPEIEWPQVRAIWPELAAVSPSIAGHVEIDAKYAVYLERQVADVAAFRRDEG LLLTDVDYAQVPGLSNEARGRLERHRPRTVGQAGRLDGITPAALGILAAYLRREARKRPAVVDGEG
Sequences:
>Translated_626_residues MRNSYDVIVIGGGHAGCEAAAAAARLGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAGGIQFR MLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATANLRVIEGEADTLLNEAGRVTGIRLADGRELVAGAVVITTGTFLRGL IHLGEQCWPAGRIDEAPALGLSASFEALGLALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG ITRTLPATHEVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRA ILATIPGLERTVMLRPGYAIEYDHVDPRELEPTLQTKRLRGLYLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGEGVVF DRADGYLGVMIDDLVTRGISEPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGTERAAFHRGKMAALAEAKALAQSL AITPNEAARHGLSLNRDGQRRSAFDLLSYPEIEWPQVRAIWPELAAVSPSIAGHVEIDAKYAVYLERQVADVAAFRRDEG LLLTDVDYAQVPGLSNEARGRLERHRPRTVGQAGRLDGITPAALGILAAYLRREARKRPAVVDGEG >Mature_626_residues MRNSYDVIVIGGGHAGCEAAAAAARLGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAGGIQFR MLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATANLRVIEGEADTLLNEAGRVTGIRLADGRELVAGAVVITTGTFLRGL IHLGEQCWPAGRIDEAPALGLSASFEALGLALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG ITRTLPATHEVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRA ILATIPGLERTVMLRPGYAIEYDHVDPRELEPTLQTKRLRGLYLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGEGVVF DRADGYLGVMIDDLVTRGISEPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGTERAAFHRGKMAALAEAKALAQSL AITPNEAARHGLSLNRDGQRRSAFDLLSYPEIEWPQVRAIWPELAAVSPSIAGHVEIDAKYAVYLERQVADVAAFRRDEG LLLTDVDYAQVPGLSNEARGRLERHRPRTVGQAGRLDGITPAALGILAAYLRREARKRPAVVDGEG
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=639, Percent_Identity=44.131455399061, Blast_Score=511, Evalue=1e-145, Organism=Homo sapiens, GI19882217, Length=664, Percent_Identity=42.4698795180723, Blast_Score=496, Evalue=1e-140, Organism=Homo sapiens, GI183227703, Length=679, Percent_Identity=41.5316642120766, Blast_Score=491, Evalue=1e-139, Organism=Escherichia coli, GI2367273, Length=625, Percent_Identity=50.72, Blast_Score=590, Evalue=1e-170, Organism=Caenorhabditis elegans, GI17534255, Length=629, Percent_Identity=44.0381558028617, Blast_Score=494, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6321202, Length=638, Percent_Identity=46.0815047021944, Blast_Score=545, Evalue=1e-156, Organism=Drosophila melanogaster, GI24658174, Length=629, Percent_Identity=46.5818759936407, Blast_Score=525, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_RHOP2 (Q2J358)
Other databases:
- EMBL: CP000250 - RefSeq: YP_484013.1 - ProteinModelPortal: Q2J358 - SMR: Q2J358 - STRING: Q2J358 - GeneID: 3908829 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_0391 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - BioCyc: RPAL316058:RPB_0391-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 66861; Mature: 66861
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNSYDVIVIGGGHAGCEAAAAAARLGAATALVTHRFATVGAMSCNPAIGGLGKGHLVRE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH VDALDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATANLRVIE HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE GEADTLLNEAGRVTGIRLADGRELVAGAVVITTGTFLRGLIHLGEQCWPAGRIDEAPALG CCHHHHHHHCCCEEEEEEECCCEEHEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC LSASFEALGLALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG CCCCHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHHCCCCCCCCEECC ITRTLPATHEVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD CEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCC DPTVYPNGISTSLPEEVQRAILATIPGLERTVMLRPGYAIEYDHVDPRELEPTLQTKRLR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHCCCHHHHHHHC GLYLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGEGVVFDRADGYLGVMIDDLVTRGIS EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHCCC EPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGTERAAFHRGKMAALAEAKALAQSL HHHHHHHCCCEEEEEEEECCCCHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHH AITPNEAARHGLSLNRDGQRRSAFDLLSYPEIEWPQVRAIWPELAAVSPSIAGHVEIDAK CCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCE YAVYLERQVADVAAFRRDEGLLLTDVDYAQVPGLSNEARGRLERHRPRTVGQAGRLDGIT EEEEEHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PAALGILAAYLRREARKRPAVVDGEG HHHHHHHHHHHHHHHHCCCCEECCCC >Mature Secondary Structure MRNSYDVIVIGGGHAGCEAAAAAARLGAATALVTHRFATVGAMSCNPAIGGLGKGHLVRE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH VDALDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQAAIRATANLRVIE HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE GEADTLLNEAGRVTGIRLADGRELVAGAVVITTGTFLRGLIHLGEQCWPAGRIDEAPALG CCHHHHHHHCCCEEEEEEECCCEEHEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC LSASFEALGLALGRLKTGTPPRLDGRTIDWGAVEMQPGDDPPEPFSVLTPAITTPQIECG CCCCHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHHCCCCCCCCEECC ITRTLPATHEVIRANVHRSPMYSGQIQSSGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD CEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCC DPTVYPNGISTSLPEEVQRAILATIPGLERTVMLRPGYAIEYDHVDPRELEPTLQTKRLR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCHHHCCCHHHHHHHC GLYLAGQINGTTGYEEAAAQGLVAGLNAALAAGGGEGVVFDRADGYLGVMIDDLVTRGIS EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHHHCCC EPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGTERAAFHRGKMAALAEAKALAQSL HHHHHHHCCCEEEEEEEECCCCHHHCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHH AITPNEAARHGLSLNRDGQRRSAFDLLSYPEIEWPQVRAIWPELAAVSPSIAGHVEIDAK CCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCE YAVYLERQVADVAAFRRDEGLLLTDVDYAQVPGLSNEARGRLERHRPRTVGQAGRLDGIT EEEEEHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PAALGILAAYLRREARKRPAVVDGEG HHHHHHHHHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA