Click here to switch to the map view.

The map label for this gene is 86747449

Identifier: 86747449

GI number: 86747449

Start: 368140

End: 368628

Strand: Reverse

Name: 86747449

Synonym: RPB_0323

Alternate gene names: NA

Gene position: 368628-368140 (Counterclockwise)

Preceding gene: 86747450

Following gene: 86747447

Centisome position: 6.91

GC content: 62.37

Gene sequence:

>489_bases
ATGGCGGTGAACACCAATCAGGGCGACGCGCAGCACGCCTGGGATCTGATGAAGACAATCACCTTCGCGATGCTGGCGAC
GCGCGACGGCGAGAAGATTCGCTCGCGGCCGATGGCGGCCTATATCCGTCCCGACGAAGGCCTGATCTATTTTCTCACCG
ACGTGCGCCGCCACAAGGACGACGAGATCGCGCAGGATCACCACGTCAATCTCGGTTTCGCCGACGCAAGCGCGCAGAAA
TACGTCTCGGTGTCCGGCTATGCGGCGATCTCGAATGATCGCGGCAAGATCAAGGAGCTGTTCGGCACCGCTGCGAAAGC
GTGGTGGGACAGTCCCGACGATCCGAACATCCGCATCCTCAAGGTCACGCCGGAGGAAGCCGAGTACTGGGACTCGCCCG
GTACCCTCGTCAGCTACGTCAAGATGGCGGTGGCGGCTGCGACCGGCACACGCCCCGACCTCGGTGACAATCGCAAGGTG
GCGATTTGA

Upstream 100 bases:

>100_bases
ATTTGCTTGTCTGCGCCCGCCCGACACCATCGCCATCGCCATTGCGGAACATCGCCGCGAGCGAATCGTTATGCCGCCGA
ACAGGCATGGAGATGGACGG

Downstream 100 bases:

>100_bases
CGATGCCAGAGCCCCAGGAAGTCCCTGATACGCCGGGCCCAACCGAGCCCCCGCCGGAGGTGCCGCCGAGCACCCCCGGC
ACGCCGACCGAACCGCCGCC

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAVNTNQGDAQHAWDLMKTITFAMLATRDGEKIRSRPMAAYIRPDEGLIYFLTDVRRHKDDEIAQDHHVNLGFADASAQK
YVSVSGYAAISNDRGKIKELFGTAAKAWWDSPDDPNIRILKVTPEEAEYWDSPGTLVSYVKMAVAAATGTRPDLGDNRKV
AI

Sequences:

>Translated_162_residues
MAVNTNQGDAQHAWDLMKTITFAMLATRDGEKIRSRPMAAYIRPDEGLIYFLTDVRRHKDDEIAQDHHVNLGFADASAQK
YVSVSGYAAISNDRGKIKELFGTAAKAWWDSPDDPNIRILKVTPEEAEYWDSPGTLVSYVKMAVAAATGTRPDLGDNRKV
AI
>Mature_161_residues
AVNTNQGDAQHAWDLMKTITFAMLATRDGEKIRSRPMAAYIRPDEGLIYFLTDVRRHKDDEIAQDHHVNLGFADASAQKY
VSVSGYAAISNDRGKIKELFGTAAKAWWDSPDDPNIRILKVTPEEAEYWDSPGTLVSYVKMAVAAATGTRPDLGDNRKVA
I

Specific function: Unknown

COG id: COG3871

COG function: function code R; Uncharacterized stress protein (general stress protein 26)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17984; Mature: 17853

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNTNQGDAQHAWDLMKTITFAMLATRDGEKIRSRPMAAYIRPDEGLIYFLTDVRRHKD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCEEEEEEHHHHCCC
DEIAQDHHVNLGFADASAQKYVSVSGYAAISNDRGKIKELFGTAAKAWWDSPDDPNIRIL
CCCCCCCCCEEEECCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
KVTPEEAEYWDSPGTLVSYVKMAVAAATGTRPDLGDNRKVAI
EECCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECC
>Mature Secondary Structure 
AVNTNQGDAQHAWDLMKTITFAMLATRDGEKIRSRPMAAYIRPDEGLIYFLTDVRRHKD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCEEEEEEHHHHCCC
DEIAQDHHVNLGFADASAQKYVSVSGYAAISNDRGKIKELFGTAAKAWWDSPDDPNIRIL
CCCCCCCCCEEEECCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
KVTPEEAEYWDSPGTLVSYVKMAVAAATGTRPDLGDNRKVAI
EECCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA