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The map label for this gene is rhdA [H]

Identifier: 86747432

GI number: 86747432

Start: 347080

End: 347961

Strand: Direct

Name: rhdA [H]

Synonym: RPB_0306

Alternate gene names: 86747432

Gene position: 347080-347961 (Clockwise)

Preceding gene: 86747431

Following gene: 86747433

Centisome position: 6.51

GC content: 65.08

Gene sequence:

>882_bases
ATGACTGAGAAGGTTCTTGTCACGCCCGCCGAACTCTCCGAAATGCTTGCCTCCCCGACCACCGTGGTGATCGACACCCG
CAATCCCGAAGCCTATGCGGCCGGCCACGTTCCCGGCGCCGTCAACATCCACGAGATCTTCACGTACCTCGCGACCTCGA
CGCCCGAGGGCGTCAAGGAGATGAGCGAGAAGTTCGCTGCCGCGTTCGGCGCCGCCGGCCTGTCCGGTGAAGAGACCGCG
GTGATCTACGAACAGTCGATGAACACCGGCTTCGGCCAATCCTGCCGCGGCTATGTGCTGCTGACCTATCTGGGCTATCC
GAAGGTCAAGATCCTGCATGGTGGCTACGCGGCCTGGACCGCGGCCGGCCTGCCGAGCACCACCGATGTGCCGACGCCGA
CGCCGAAGACGTTCGCGGTCGATCCGGAAGCGGCCTCGATCCTGGTCGATCTGGAATCGATGAAGGCGGCGGTCGCGGAC
CAGTCCAAGGTCAAGCTCGACACCCGCGACGTCGACGAATGGATCGGCGAAAGCTCGTCGCCCTACGGCAAGGACTTCTG
CCCGCGCAAGGGTCGCATCCCCGGCGCGGTCTGGATCGAATGGTACCGCATGATGAAGCCGTCGGCGGCCGGCCCGATGT
TCAAATCGTCGGCGGAGATTCTCGCCGAATGCGCCAGCGTCGGTATCACGCCGGACACCCCGGTCGTCCTCTACTGCTTC
AAGGGTGCCCGCGCCTCCAACACGCTGGTCGCGCTGAAGGAAGCCGGCATCAAGGACGTCAGCCTGTATTTCGGCTCCTG
GAACGAATGGTCGCGCGACCCGTCGCTGCCGATCGAGGAAGGCGCGCCCTATGCGGCGCCGTCGCTGATGGCGGCGGAGT
AA

Upstream 100 bases:

>100_bases
GTGCCGTTTCCCGCGCGCGCGGCAACAGTCACCACAGGACGCTGCCCTGTGCCCGAGACACTCCCAGCCGACGTTCAACG
ATGCACACAGGAGCGAACCC

Downstream 100 bases:

>100_bases
TCGCGCGGCGGGGCCGGTCGCGCTGGCCGGCTCCGCCGATCCGCAAGGAACCCTGTTCGAGGAGCGGCTGCAGGCGATGC
CGGCATTTCAACCCAAAAAG

Product: rhodanese-like protein

Products: NA

Alternate protein names: Rhodanese-like protein [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTEKVLVTPAELSEMLASPTTVVIDTRNPEAYAAGHVPGAVNIHEIFTYLATSTPEGVKEMSEKFAAAFGAAGLSGEETA
VIYEQSMNTGFGQSCRGYVLLTYLGYPKVKILHGGYAAWTAAGLPSTTDVPTPTPKTFAVDPEAASILVDLESMKAAVAD
QSKVKLDTRDVDEWIGESSSPYGKDFCPRKGRIPGAVWIEWYRMMKPSAAGPMFKSSAEILAECASVGITPDTPVVLYCF
KGARASNTLVALKEAGIKDVSLYFGSWNEWSRDPSLPIEEGAPYAAPSLMAAE

Sequences:

>Translated_293_residues
MTEKVLVTPAELSEMLASPTTVVIDTRNPEAYAAGHVPGAVNIHEIFTYLATSTPEGVKEMSEKFAAAFGAAGLSGEETA
VIYEQSMNTGFGQSCRGYVLLTYLGYPKVKILHGGYAAWTAAGLPSTTDVPTPTPKTFAVDPEAASILVDLESMKAAVAD
QSKVKLDTRDVDEWIGESSSPYGKDFCPRKGRIPGAVWIEWYRMMKPSAAGPMFKSSAEILAECASVGITPDTPVVLYCF
KGARASNTLVALKEAGIKDVSLYFGSWNEWSRDPSLPIEEGAPYAAPSLMAAE
>Mature_292_residues
TEKVLVTPAELSEMLASPTTVVIDTRNPEAYAAGHVPGAVNIHEIFTYLATSTPEGVKEMSEKFAAAFGAAGLSGEETAV
IYEQSMNTGFGQSCRGYVLLTYLGYPKVKILHGGYAAWTAAGLPSTTDVPTPTPKTFAVDPEAASILVDLESMKAAVADQ
SKVKLDTRDVDEWIGESSSPYGKDFCPRKGRIPGAVWIEWYRMMKPSAAGPMFKSSAEILAECASVGITPDTPVVLYCFK
GARASNTLVALKEAGIKDVSLYFGSWNEWSRDPSLPIEEGAPYAAPSLMAAE

Specific function: Unknown

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI17402865, Length=244, Percent_Identity=26.6393442622951, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87081967, Length=261, Percent_Identity=29.5019157088123, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI87082121, Length=281, Percent_Identity=25.9786476868327, Blast_Score=86, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17561888, Length=267, Percent_Identity=28.8389513108614, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71997283, Length=251, Percent_Identity=29.4820717131474, Blast_Score=85, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001307 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 31307; Mature: 31176

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKVLVTPAELSEMLASPTTVVIDTRNPEAYAAGHVPGAVNIHEIFTYLATSTPEGVKE
CCCCEEECHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHH
MSEKFAAAFGAAGLSGEETAVIYEQSMNTGFGQSCRGYVLLTYLGYPKVKILHGGYAAWT
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHH
AAGLPSTTDVPTPTPKTFAVDPEAASILVDLESMKAAVADQSKVKLDTRDVDEWIGESSS
CCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHCCCCCEEECCCHHHHHCCCCCC
PYGKDFCPRKGRIPGAVWIEWYRMMKPSAAGPMFKSSAEILAECASVGITPDTPVVLYCF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
KGARASNTLVALKEAGIKDVSLYFGSWNEWSRDPSLPIEEGAPYAAPSLMAAE
CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEKVLVTPAELSEMLASPTTVVIDTRNPEAYAAGHVPGAVNIHEIFTYLATSTPEGVKE
CCCEEECHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHH
MSEKFAAAFGAAGLSGEETAVIYEQSMNTGFGQSCRGYVLLTYLGYPKVKILHGGYAAWT
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHH
AAGLPSTTDVPTPTPKTFAVDPEAASILVDLESMKAAVADQSKVKLDTRDVDEWIGESSS
CCCCCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHCCCCCEEECCCHHHHHCCCCCC
PYGKDFCPRKGRIPGAVWIEWYRMMKPSAAGPMFKSSAEILAECASVGITPDTPVVLYCF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
KGARASNTLVALKEAGIKDVSLYFGSWNEWSRDPSLPIEEGAPYAAPSLMAAE
CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8617271; 10788330 [H]