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The map label for this gene is 86747431

Identifier: 86747431

GI number: 86747431

Start: 345810

End: 346940

Strand: Direct

Name: 86747431

Synonym: RPB_0305

Alternate gene names: NA

Gene position: 345810-346940 (Clockwise)

Preceding gene: 86747430

Following gene: 86747432

Centisome position: 6.49

GC content: 68.17

Gene sequence:

>1131_bases
ATGCTGGATGTCCAGTCGATGAACACAGGCGATGCCGCGGCGCTTCCCGGCGCCGAGGTCGTCGAAGCGGTGCGCGCCTT
GTCGGCGCGAGAGCTGCCGTCGCTGGTCAACCGGATCGATGTCGACGGTTACTATCCGGAAGATCTGATGCGCGCCTTCG
GGCGTCTCGGCGCCTATGCGCATCACCTTCCGGGCAAGAGCCCGAGCGTCGATCTGATGACCTCGATCAACGCCATGGCG
GCGGCCGGCGAGCACTGCCTGTCGACGTCGTTCTGCATGTGGTGTCAGGACGCGCTGGCCTGGTACATCTACGCCTCCGA
CAACGAGCATCTGCGGACCGGCATCGGCCCGCAGATCGCCAGCGGAGCGGTGCTCGGCGGCACCGCGCTGTCGAACCCGA
TGAAGTCGCTGTTCGGCATCGAGCCGATGCGGCTGAAGGGCCGCCGCGTCGCCGGCGGCTATGTGGTCAAGGGCCTGCTG
CCCTACGTCTCCAATCTCGGCCCCGATCACTATTTCGGCGGCATCTTCGAGGTCGAGGACGGCGGCACGACGCGCAACGT
GATGGCGGCGATTCCCTGCGCCGCCGAAGGCCTGAGCCTCGCCGACAACGCGAAGTTCACCGCGCTCGACGGCACCCGCA
CCTTCGCGGTGCAGATGCGCGACGTGATGGTGCCGGACAATTGGGTGATCGCCGATCCGGTCGACGACTACATCAAGCGC
ATCCGCGCCGGCTTCATCCTGCTGCAGGCCGGCATGGCGTTCGGCCTGATCCGCGACTGCCTGCGGCTGATCGAGCAGTG
CAAGAGCCCGCTCGGCCACGTCAACAAATACCTCGACGTCCAGGCCGAGCCGCTCGCCGAAGGGCTCGCCGCCATGGAGG
CCGAGGTCGCGCGCCTCGCCGCGACGCCGTTCGAAAGCGATCGCGACTATTGGCGGGCGGTGATCGAGGCGCGTCTGGCC
GCCGGCGACGCCTCGGTCGCGGCGGCTCATGCCGCGATGCTTCATTGCGGCGCGCGCGGCTACGTCGCCGGCGCCACCGC
GCAGCGCCGCCTGCGCGAGGCTTACTTCGTGGCGATCGTGACACCCGCCACCAAGCAGCTCCGCAAGATGCTGGCCGACA
TGGCGCATTAG

Upstream 100 bases:

>100_bases
ATGCGCGGCTGTGGTCGCCGGTGGCGAACACCTTCTCCCGCCCGGTCAATCTCGACGTGACGATGGCCTGATCCCAGCCC
TCCAACAGCGGAGCTGAGCC

Downstream 100 bases:

>100_bases
TTCGCGCGCGGTCGACGCGGAGGCGCATTCGCCGTCCGCGTGCCGTTTCCCGCGCGCGCGGCAACAGTCACCACAGGACG
CTGCCCTGTGCCCGAGACAC

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: Acyl-CoA Dehydrogenase Family Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase FadE; Acyl-CoA Dehydrogenases; Dehydrogenase; Acyl-CoA Dehydrogenase Type 2 Domain; Acyl-CoA Dehydrogenase Domain-Containing Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLDVQSMNTGDAAALPGAEVVEAVRALSARELPSLVNRIDVDGYYPEDLMRAFGRLGAYAHHLPGKSPSVDLMTSINAMA
AAGEHCLSTSFCMWCQDALAWYIYASDNEHLRTGIGPQIASGAVLGGTALSNPMKSLFGIEPMRLKGRRVAGGYVVKGLL
PYVSNLGPDHYFGGIFEVEDGGTTRNVMAAIPCAAEGLSLADNAKFTALDGTRTFAVQMRDVMVPDNWVIADPVDDYIKR
IRAGFILLQAGMAFGLIRDCLRLIEQCKSPLGHVNKYLDVQAEPLAEGLAAMEAEVARLAATPFESDRDYWRAVIEARLA
AGDASVAAAHAAMLHCGARGYVAGATAQRRLREAYFVAIVTPATKQLRKMLADMAH

Sequences:

>Translated_376_residues
MLDVQSMNTGDAAALPGAEVVEAVRALSARELPSLVNRIDVDGYYPEDLMRAFGRLGAYAHHLPGKSPSVDLMTSINAMA
AAGEHCLSTSFCMWCQDALAWYIYASDNEHLRTGIGPQIASGAVLGGTALSNPMKSLFGIEPMRLKGRRVAGGYVVKGLL
PYVSNLGPDHYFGGIFEVEDGGTTRNVMAAIPCAAEGLSLADNAKFTALDGTRTFAVQMRDVMVPDNWVIADPVDDYIKR
IRAGFILLQAGMAFGLIRDCLRLIEQCKSPLGHVNKYLDVQAEPLAEGLAAMEAEVARLAATPFESDRDYWRAVIEARLA
AGDASVAAAHAAMLHCGARGYVAGATAQRRLREAYFVAIVTPATKQLRKMLADMAH
>Mature_376_residues
MLDVQSMNTGDAAALPGAEVVEAVRALSARELPSLVNRIDVDGYYPEDLMRAFGRLGAYAHHLPGKSPSVDLMTSINAMA
AAGEHCLSTSFCMWCQDALAWYIYASDNEHLRTGIGPQIASGAVLGGTALSNPMKSLFGIEPMRLKGRRVAGGYVVKGLL
PYVSNLGPDHYFGGIFEVEDGGTTRNVMAAIPCAAEGLSLADNAKFTALDGTRTFAVQMRDVMVPDNWVIADPVDDYIKR
IRAGFILLQAGMAFGLIRDCLRLIEQCKSPLGHVNKYLDVQAEPLAEGLAAMEAEVARLAATPFESDRDYWRAVIEARLA
AGDASVAAAHAAMLHCGARGYVAGATAQRRLREAYFVAIVTPATKQLRKMLADMAH

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40379; Mature: 40379

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVQSMNTGDAAALPGAEVVEAVRALSARELPSLVNRIDVDGYYPEDLMRAFGRLGAYA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HHLPGKSPSVDLMTSINAMAAAGEHCLSTSFCMWCQDALAWYIYASDNEHLRTGIGPQIA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHCCCCCHHH
SGAVLGGTALSNPMKSLFGIEPMRLKGRRVAGGYVVKGLLPYVSNLGPDHYFGGIFEVED
CCCEECCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHCCCEEEECC
GGTTRNVMAAIPCAAEGLSLADNAKFTALDGTRTFAVQMRDVMVPDNWVIADPVDDYIKR
CCCCCHHHEECCCHHCCCCCCCCCEEEEECCCEEEEEEEHHEECCCCEEEECCHHHHHHH
IRAGFILLQAGMAFGLIRDCLRLIEQCKSPLGHVNKYLDVQAEPLAEGLAAMEAEVARLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ATPFESDRDYWRAVIEARLAAGDASVAAAHAAMLHCGARGYVAGATAQRRLREAYFVAIV
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHEEEEE
TPATKQLRKMLADMAH
CCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDVQSMNTGDAAALPGAEVVEAVRALSARELPSLVNRIDVDGYYPEDLMRAFGRLGAYA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HHLPGKSPSVDLMTSINAMAAAGEHCLSTSFCMWCQDALAWYIYASDNEHLRTGIGPQIA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHCCCCCHHH
SGAVLGGTALSNPMKSLFGIEPMRLKGRRVAGGYVVKGLLPYVSNLGPDHYFGGIFEVED
CCCEECCHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHCCCEEEECC
GGTTRNVMAAIPCAAEGLSLADNAKFTALDGTRTFAVQMRDVMVPDNWVIADPVDDYIKR
CCCCCHHHEECCCHHCCCCCCCCCEEEEECCCEEEEEEEHHEECCCCEEEECCHHHHHHH
IRAGFILLQAGMAFGLIRDCLRLIEQCKSPLGHVNKYLDVQAEPLAEGLAAMEAEVARLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ATPFESDRDYWRAVIEARLAAGDASVAAAHAAMLHCGARGYVAGATAQRRLREAYFVAIV
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHEEEEE
TPATKQLRKMLADMAH
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA