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The map label for this gene is 86747423

Identifier: 86747423

GI number: 86747423

Start: 336433

End: 337215

Strand: Reverse

Name: 86747423

Synonym: RPB_0297

Alternate gene names: NA

Gene position: 337215-336433 (Counterclockwise)

Preceding gene: 86747426

Following gene: 86747422

Centisome position: 6.32

GC content: 64.88

Gene sequence:

>783_bases
ATGCATTTCGACCTTTCAAACCGGAACCTCGCGCAAAAGATCTCGATTCTGGTGCTGGGAATTACCTTCGTTGTCGCGCT
CGCCATCGGCGGCGTCAGTCAGCTGGTGCTGCACAAGGTCACGACCGACCAGGCCAAGCAGCAGGCCAGCGTGGCCTCGC
TGGACCGCCTGATCGGACATGGAGGGGCGACGTTGTCGCCGGTCCGGGCGGCGGATGGCAGCATCGTCGGGATGCTGGTG
ATGCAGCAGGATTCCGGGGCGGTGGTGATGCCTGCGTCCTATGAGGGCCAGGGCCTCGTGGTCCAGGCTGCCGAGACCGT
CACCGCGCCGGCTGCGAACTACGCGATGAGCGCCGCCAACACCATGCTGCTGCTCGCCGGGATCGTGGTGTTCGCCGTGG
TCGGCCTGATCGGCACCCGGATCTCCCGCGGCCTGCTGGCTCCGCTCGGCGAACTCGAGAAGGACGTCGAGAAGCTCGCC
AGCGGCGAGACCAACATCCGCATTCATGCGCTCAGCCGCTCCGACGAAATCGGCCGGATCGCGCGCTCGATCGCCAAGAT
CCAGGAATCGCTGATCGAACTCGCCAAGCTCAAGACCCAGCGGGTGGTCGGCGGCGCCAATTCGATTCTGGAGAATCTCA
AGGAGATGTGGGGCGATCTGAGATCCGCCGCCCGCAATGCCCGCGAGATGCTGTTCACCGACGGCAAGACCATCAGCGAG
ACGTTGTCGCGATCGTGGAGCGAATGGGTGCATAACGGCCTCGGCGTCCCCAAGCGCGCCTGA

Upstream 100 bases:

>100_bases
GAAACTTGAGGTTTCGTTAACCTTAATGAGTAAAGCGTTGATCACGCTGTTCACCTTAGGGGGCAAGCCGCCCCTAATTG
AAGAAAGCTGGAGAAGAACC

Downstream 100 bases:

>100_bases
CGCGACTCGCCTCGCGCGCCTCCTTCGGCCGGAGGGGGCGCGGGTGGTGACCTGCCTCGATCAAGTTCAAAAGCCCGCGC
TCGCCGCGGGCTTTTTGTTT

Product: histidine kinase, HAMP region

Products: NA

Alternate protein names: Histidine Kinase; Histidine Kinase HAMP Region Domain-Containing Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MHFDLSNRNLAQKISILVLGITFVVALAIGGVSQLVLHKVTTDQAKQQASVASLDRLIGHGGATLSPVRAADGSIVGMLV
MQQDSGAVVMPASYEGQGLVVQAAETVTAPAANYAMSAANTMLLLAGIVVFAVVGLIGTRISRGLLAPLGELEKDVEKLA
SGETNIRIHALSRSDEIGRIARSIAKIQESLIELAKLKTQRVVGGANSILENLKEMWGDLRSAARNAREMLFTDGKTISE
TLSRSWSEWVHNGLGVPKRA

Sequences:

>Translated_260_residues
MHFDLSNRNLAQKISILVLGITFVVALAIGGVSQLVLHKVTTDQAKQQASVASLDRLIGHGGATLSPVRAADGSIVGMLV
MQQDSGAVVMPASYEGQGLVVQAAETVTAPAANYAMSAANTMLLLAGIVVFAVVGLIGTRISRGLLAPLGELEKDVEKLA
SGETNIRIHALSRSDEIGRIARSIAKIQESLIELAKLKTQRVVGGANSILENLKEMWGDLRSAARNAREMLFTDGKTISE
TLSRSWSEWVHNGLGVPKRA
>Mature_260_residues
MHFDLSNRNLAQKISILVLGITFVVALAIGGVSQLVLHKVTTDQAKQQASVASLDRLIGHGGATLSPVRAADGSIVGMLV
MQQDSGAVVMPASYEGQGLVVQAAETVTAPAANYAMSAANTMLLLAGIVVFAVVGLIGTRISRGLLAPLGELEKDVEKLA
SGETNIRIHALSRSDEIGRIARSIAKIQESLIELAKLKTQRVVGGANSILENLKEMWGDLRSAARNAREMLFTDGKTISE
TLSRSWSEWVHNGLGVPKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27543; Mature: 27543

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFDLSNRNLAQKISILVLGITFVVALAIGGVSQLVLHKVTTDQAKQQASVASLDRLIGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGATLSPVRAADGSIVGMLVMQQDSGAVVMPASYEGQGLVVQAAETVTAPAANYAMSAAN
CCCCCCCHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHH
TMLLLAGIVVFAVVGLIGTRISRGLLAPLGELEKDVEKLASGETNIRIHALSRSDEIGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
ARSIAKIQESLIELAKLKTQRVVGGANSILENLKEMWGDLRSAARNAREMLFTDGKTISE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TLSRSWSEWVHNGLGVPKRA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHFDLSNRNLAQKISILVLGITFVVALAIGGVSQLVLHKVTTDQAKQQASVASLDRLIGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGATLSPVRAADGSIVGMLVMQQDSGAVVMPASYEGQGLVVQAAETVTAPAANYAMSAAN
CCCCCCCHHHCCCCEEEEEEEECCCCCEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHH
TMLLLAGIVVFAVVGLIGTRISRGLLAPLGELEKDVEKLASGETNIRIHALSRSDEIGRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
ARSIAKIQESLIELAKLKTQRVVGGANSILENLKEMWGDLRSAARNAREMLFTDGKTISE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
TLSRSWSEWVHNGLGVPKRA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA