| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nadX [H]
Identifier: 86747274
GI number: 86747274
Start: 159570
End: 160388
Strand: Direct
Name: nadX [H]
Synonym: RPB_0147
Alternate gene names: 86747274
Gene position: 159570-160388 (Clockwise)
Preceding gene: 86747273
Following gene: 86747275
Centisome position: 2.99
GC content: 70.21
Gene sequence:
>819_bases ATGCGCAGCGGCCGGGCCCCGCAGCGCGTCGCCATTGCCGGGCTCGGCGCCATCGGCAAGGCGATCGCGCGTGAACTCGA TCGCGGGCTCGACGGGCTGACGCTCGGCGCCGTCGCCAGCGGCGACCCGGAGAAGCATCGCGCCTTCCTCGACGGCCTGC GGACGACGCCGCCGGTGGTCCCGCTGGATCAGTTGCACGCCCACGCAGACCTCGTGATCGAGGCGGCGCCGAGCAGGCTG CTGCGCGCGATCGTCGAGCCGTTCGTCAGCCGCGGCAGGACCGCGATCGTGCTCAGCGCCGCGGCGCTGCTGCAGAACGA GGACCTGATCGATCTGGCCAATCTGAACGGCGGCCAGATCATCGTGCCGACCGGCGCGCTGATCGGGCTCGACGCCGTCA CTGCCGCCGCCGTCGGCACGATTCATTCGGTGCGGATGATCACCCGCAAGCCGGTCGATGGCCTGCGCGGCGCGCCGTTC ATCGTCGACAACGGCATCGACCTCGACGGATTGCGCGAACCGCTGAAACTGTTCGAAGGCACCGCGCGCGAAGCCGGCAA GGGCTTTCCGGCCAATCTCAACGTCGCGGTGGCGCTGTCGCTGGCCGGCATCGGGCCGGATCGCACCATGGTGGAGATCT GGGCCGATCCGGGCGTCACCCGCAACACCCACCGCATCGAGGTCGATGCGGATTCGGCGCGGTTCGCGATGACGATCGAG AACGTGCCGTCCGACAATCCCCGCACCGGCCTGATCACGCCGCTGTCGGTGATCGCGCTGCTGCGCAAGCAATCCGCCGC GCTGCGGGTCGGGACCTGA
Upstream 100 bases:
>100_bases TGTTCCGCCACGGCCTGACCTGGCACTTCAACCGCCCGCCGGTGGAAGGGCTCGACTACGAGATGGACTGCCGCTGCGTG CATCGCGAGCGCGTGGTCTG
Downstream 100 bases:
>100_bases GGCGGCGACGACCTCCCGGGGGGCGACGGGCGTTCGGGCGCGCCGAAATGCCGCCTTCCCCTGCGAATTGCGGGAAGCGA AAATACCGCAACCGCACAAA
Product: putative L-aspartate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRSGRAPQRVAIAGLGAIGKAIARELDRGLDGLTLGAVASGDPEKHRAFLDGLRTTPPVVPLDQLHAHADLVIEAAPSRL LRAIVEPFVSRGRTAIVLSAAALLQNEDLIDLANLNGGQIIVPTGALIGLDAVTAAAVGTIHSVRMITRKPVDGLRGAPF IVDNGIDLDGLREPLKLFEGTAREAGKGFPANLNVAVALSLAGIGPDRTMVEIWADPGVTRNTHRIEVDADSARFAMTIE NVPSDNPRTGLITPLSVIALLRKQSAALRVGT
Sequences:
>Translated_272_residues MRSGRAPQRVAIAGLGAIGKAIARELDRGLDGLTLGAVASGDPEKHRAFLDGLRTTPPVVPLDQLHAHADLVIEAAPSRL LRAIVEPFVSRGRTAIVLSAAALLQNEDLIDLANLNGGQIIVPTGALIGLDAVTAAAVGTIHSVRMITRKPVDGLRGAPF IVDNGIDLDGLREPLKLFEGTAREAGKGFPANLNVAVALSLAGIGPDRTMVEIWADPGVTRNTHRIEVDADSARFAMTIE NVPSDNPRTGLITPLSVIALLRKQSAALRVGT >Mature_272_residues MRSGRAPQRVAIAGLGAIGKAIARELDRGLDGLTLGAVASGDPEKHRAFLDGLRTTPPVVPLDQLHAHADLVIEAAPSRL LRAIVEPFVSRGRTAIVLSAAALLQNEDLIDLANLNGGQIIVPTGALIGLDAVTAAAVGTIHSVRMITRKPVDGLRGAPF IVDNGIDLDGLREPLKLFEGTAREAGKGFPANLNVAVALSLAGIGPDRTMVEIWADPGVTRNTHRIEVDADSARFAMTIE NVPSDNPRTGLITPLSVIALLRKQSAALRVGT
Specific function: Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate [H]
COG id: COG1712
COG function: function code R; Predicted dinucleotide-utilizing enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L-aspartate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005106 - InterPro: IPR002811 - InterPro: IPR011182 - InterPro: IPR020626 - InterPro: IPR016040 [H]
Pfam domain/function: PF01958 DUF108; PF03447 NAD_binding_3 [H]
EC number: =1.4.1.21 [H]
Molecular weight: Translated: 28465; Mature: 28465
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGRAPQRVAIAGLGAIGKAIARELDRGLDGLTLGAVASGDPEKHRAFLDGLRTTPPVV CCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCC PLDQLHAHADLVIEAAPSRLLRAIVEPFVSRGRTAIVLSAAALLQNEDLIDLANLNGGQI CHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCEEEECCCCCEE IVPTGALIGLDAVTAAAVGTIHSVRMITRKPVDGLRGAPFIVDNGIDLDGLREPLKLFEG EEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC TAREAGKGFPANLNVAVALSLAGIGPDRTMVEIWADPGVTRNTHRIEVDADSARFAMTIE HHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEC NVPSDNPRTGLITPLSVIALLRKQSAALRVGT CCCCCCCCCCCCCHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MRSGRAPQRVAIAGLGAIGKAIARELDRGLDGLTLGAVASGDPEKHRAFLDGLRTTPPVV CCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCC PLDQLHAHADLVIEAAPSRLLRAIVEPFVSRGRTAIVLSAAALLQNEDLIDLANLNGGQI CHHHHHCCHHEEEEHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCEEEECCCCCEE IVPTGALIGLDAVTAAAVGTIHSVRMITRKPVDGLRGAPFIVDNGIDLDGLREPLKLFEG EEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCC TAREAGKGFPANLNVAVALSLAGIGPDRTMVEIWADPGVTRNTHRIEVDADSARFAMTIE HHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEC NVPSDNPRTGLITPLSVIALLRKQSAALRVGT CCCCCCCCCCCCCHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]