| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86747268
GI number: 86747268
Start: 154064
End: 155284
Strand: Direct
Name: livK [C]
Synonym: RPB_0141
Alternate gene names: 86747268
Gene position: 154064-155284 (Clockwise)
Preceding gene: 86747266
Following gene: 86747269
Centisome position: 2.89
GC content: 63.72
Gene sequence:
>1221_bases ATGCTTCACGCGTGGGTTGCTCGCTGCGTTCGCCTCTCGATCCCGCTCGGCATTGCCGCGCTGGCATCCGGAATCCAGAT ATCCGCAGCGTCGGCCGACGACGTCATCAAGATCGGCGCGCCGCTGCCGATCACCGGGCCGCTGGCGCCGGAAGCCATCA AGCAGCAGCAGGGCTACAATCTGTGGGCCGAACAGGCCAACAAGGCCGGCGGCATTTCGGTCGGCGGCAAGAAGTACAAG GTCGAGATCGTCTACACCGACTACCAGTCGAACACGCCGCGCGCGGTGCAGGCGACCGAGCAGCTGATCACCCAGAACAA CGTCAACTTCGTGTTCTCGCCGTTCGGCTCCGGTGCGGCGAAGGCGGCCAGCACGGTGTCGGAAAAGCACAAGGTGCCGA CGCTGGCGGCGACCGCCTCGTCGTCCCAGGTCTACGACCAGGGCTACAAATATCTGTTCGGCACCTTCACCCCGAACGAC ACCCTGACCACGCCGCTGACCGAAATGATCAAGGCCAAGGTGCCCGAGGTCAAGAAGGTCGCGATCCTCGCCCGCAACGA TCTGTTCCCGCTGGCGATCGCGCAGGAGATGGAGAAGTCGGCCAAGGCCAACGGCCTCGAGGTGGTGTATTTCGAGAAAT ACGCGATCGGCACGCTCGACCATTCCGCCACGCTGTCGTCGATCAAGGCGCAGTCGCCGCAGTGGATCTTCGTCACCGGC TACACCAACGACCTGCTGCTGGTGCGCAAGCAGATGATCGACCAGCAGATGAAGGCCCCGGTGGTCTCGATGATCGCCGG CCCGGCCTATCAGGAGTTCATCGACGCGCTCGGCAAGGGGGCCGAGAACGTCTCGAGCGCCGCCTGGTGGCATCCGGCCG CGCGCTATGACGGCAAGGACATCTTTGGCTCCACCGCCAATTTCGTGAAGCTGTTCAAGGACAAGTACAACGCCGAACCG GACTACGCGCATGCTTCGGCGGCGCTGTGCGGCGCGCTGTTCCAGATCGCGATCGAGAAGGCCGGTTCGATCGATCGCGA CAAGGTGCGCGACGAACTCGCCAAGATGGACGTCGTCACCTTCTTCGGCCCGGTCAAGTTCGGCGCCAACGGCCAGATCA ACTCGCTCGACCCGCCGGTCTTCCAGATCCAGGGCGGCAAGCCGGTGGTGCTGTTCCCGCAGGCGATCAAGCAAGGCGAC CTCAAGATCGGCCTCGAGTAA
Upstream 100 bases:
>100_bases GTCTAATTATTCGATCTGAGACCTCTAATTTCAATGCTTTAATTCGAATGGCCGGTTTGGCAGAGTCGACTCAACCAAAG GCCGCCAAGGAGAACTACAG
Downstream 100 bases:
>100_bases GCATCGCTCGGATCCAGTTCGGTTCAGGGCAACAAACGAAACTCCGACGTCCGTCATTGCGAGGAGCGAAGCGACGAAGC AATCCATGCCACGCATGGAG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MLHAWVARCVRLSIPLGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYNLWAEQANKAGGISVGGKKYK VEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAAKAASTVSEKHKVPTLAATASSSQVYDQGYKYLFGTFTPND TLTTPLTEMIKAKVPEVKKVAILARNDLFPLAIAQEMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTG YTNDLLLVRKQMIDQQMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKDIFGSTANFVKLFKDKYNAEP DYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVTFFGPVKFGANGQINSLDPPVFQIQGGKPVVLFPQAIKQGD LKIGLE
Sequences:
>Translated_406_residues MLHAWVARCVRLSIPLGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYNLWAEQANKAGGISVGGKKYK VEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAAKAASTVSEKHKVPTLAATASSSQVYDQGYKYLFGTFTPND TLTTPLTEMIKAKVPEVKKVAILARNDLFPLAIAQEMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTG YTNDLLLVRKQMIDQQMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKDIFGSTANFVKLFKDKYNAEP DYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVTFFGPVKFGANGQINSLDPPVFQIQGGKPVVLFPQAIKQGD LKIGLE >Mature_406_residues MLHAWVARCVRLSIPLGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYNLWAEQANKAGGISVGGKKYK VEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAAKAASTVSEKHKVPTLAATASSSQVYDQGYKYLFGTFTPND TLTTPLTEMIKAKVPEVKKVAILARNDLFPLAIAQEMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTG YTNDLLLVRKQMIDQQMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKDIFGSTANFVKLFKDKYNAEP DYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVTFFGPVKFGANGQINSLDPPVFQIQGGKPVVLFPQAIKQGD LKIGLE
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43751; Mature: 43751
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHAWVARCVRLSIPLGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYN CCHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCCC LWAEQANKAGGISVGGKKYKVEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAA HHHHHCCCCCCEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHH KAASTVSEKHKVPTLAATASSSQVYDQGYKYLFGTFTPNDTLTTPLTEMIKAKVPEVKKV HHHHHHHHHHCCCEEEECCCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHEE AILARNDLFPLAIAQEMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTG EEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECEEEECCCCHHHHHHHHCCCCCEEEEEC YTNDLLLVRKQMIDQQMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKD CCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCHHCCCHHCCCHHCCCCCH IFGSTANFVKLFKDKYNAEPDYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVT HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHE FFGPVKFGANGQINSLDPPVFQIQGGKPVVLFPQAIKQGDLKIGLE EECCEEECCCCCCCCCCCCEEEECCCCEEEECHHHHCCCCEEECCC >Mature Secondary Structure MLHAWVARCVRLSIPLGIAALASGIQISAASADDVIKIGAPLPITGPLAPEAIKQQQGYN CCHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCCC LWAEQANKAGGISVGGKKYKVEIVYTDYQSNTPRAVQATEQLITQNNVNFVFSPFGSGAA HHHHHCCCCCCEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHH KAASTVSEKHKVPTLAATASSSQVYDQGYKYLFGTFTPNDTLTTPLTEMIKAKVPEVKKV HHHHHHHHHHCCCEEEECCCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHEE AILARNDLFPLAIAQEMEKSAKANGLEVVYFEKYAIGTLDHSATLSSIKAQSPQWIFVTG EEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECEEEECCCCHHHHHHHHCCCCCEEEEEC YTNDLLLVRKQMIDQQMKAPVVSMIAGPAYQEFIDALGKGAENVSSAAWWHPAARYDGKD CCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCHHCCCHHCCCHHCCCCCH IFGSTANFVKLFKDKYNAEPDYAHASAALCGALFQIAIEKAGSIDRDKVRDELAKMDVVT HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHE FFGPVKFGANGQINSLDPPVFQIQGGKPVVLFPQAIKQGDLKIGLE EECCEEECCCCCCCCCCCCEEEECCCCEEEECHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA