| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747197
Identifier: 86747197
GI number: 86747197
Start: 71962
End: 72726
Strand: Direct
Name: 86747197
Synonym: RPB_0070
Alternate gene names: NA
Gene position: 71962-72726 (Clockwise)
Preceding gene: 86747194
Following gene: 86747205
Centisome position: 1.35
GC content: 70.07
Gene sequence:
>765_bases ATGACGATGGACGTGGTCAATCTGCGCGAGTTCTACTCCAACCGGCTCGGCGTGGTCGCGCGGCGGCTGATCAATCGCGG TATCCAGACGCGCTGGCCGGATGCGCGGGGCCAGCGCGTCCTCGGGCTCGGCTATCCGACGCCGTATCTCGGGCTGTTTC GTCACAATTGCGAACGCTGCATCGCTTTCATGCCGGCGGCCCAGGGTGTGCTGAAATGGCCGACCGCCCGCGCCACGCTG TCGACGCTGGTGGAGGAGCGCGCGCTGCCGCTGCCCGACGCCGCGGTCGACCGCATCCTGCTGGTGCATTCGCTGGAAAT GTCCGACGATCCCGACGCGCTGTTGCGCGAGGTGTGGCGGGTGCTGGCGCCCTCGGGCCGGTTGCTGGCGGTGGTGCCGA ACCGCCGCGGCGTCTGGGCGCGGATCGACAACACGCCGTTCGGCCACGGCCGGCCGTATTCACGCTCGCAGATCTCCGAT CTGCTGCGGCGGACCTGGTTCACGCCGATCGGCTGGAGCGAGGCCCTGTTCGTGCCGCCGCTCGAACAGGCCTGGCTGCT GCGCTGGGCGCCGGCGTGGGAACGAATCGGCGCCGCCATCTCGCTGCCGCTGGCCGGCGTGCATGTGGTCGAAGCGACCA AGCAGGTGGTGCGGCCGATCCAGGCCAAGCGCGAACGCACCCGGCTGATTCCCTCGCTGGAGCCGTCGCTGGTGCCGTCA CCGATGCAGGCGGACGATACCGACGCTCCGCTGCTGCCGCGCTGA
Upstream 100 bases:
>100_bases ACCACGGCCGGCGAGTTCGGCGAAATGCGGGAGAATGCGCGTGTCAACTCCGCAGCACGCCGCTTTGCCGGACCGTCGGC TGCCGTGATAAAAGCCGTGC
Downstream 100 bases:
>100_bases ACGCACAAGGGCCGCGCCGAACGCAAAAGGGCCGCGCCGAAGCGCGACCCTTGCTGTCTCGAATCGATATCGGCCGGGCT TACTCGTTGCCGGGCGAAGC
Product: methyltransferase type 11
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTMDVVNLREFYSNRLGVVARRLINRGIQTRWPDARGQRVLGLGYPTPYLGLFRHNCERCIAFMPAAQGVLKWPTARATL STLVEERALPLPDAAVDRILLVHSLEMSDDPDALLREVWRVLAPSGRLLAVVPNRRGVWARIDNTPFGHGRPYSRSQISD LLRRTWFTPIGWSEALFVPPLEQAWLLRWAPAWERIGAAISLPLAGVHVVEATKQVVRPIQAKRERTRLIPSLEPSLVPS PMQADDTDAPLLPR
Sequences:
>Translated_254_residues MTMDVVNLREFYSNRLGVVARRLINRGIQTRWPDARGQRVLGLGYPTPYLGLFRHNCERCIAFMPAAQGVLKWPTARATL STLVEERALPLPDAAVDRILLVHSLEMSDDPDALLREVWRVLAPSGRLLAVVPNRRGVWARIDNTPFGHGRPYSRSQISD LLRRTWFTPIGWSEALFVPPLEQAWLLRWAPAWERIGAAISLPLAGVHVVEATKQVVRPIQAKRERTRLIPSLEPSLVPS PMQADDTDAPLLPR >Mature_253_residues TMDVVNLREFYSNRLGVVARRLINRGIQTRWPDARGQRVLGLGYPTPYLGLFRHNCERCIAFMPAAQGVLKWPTARATLS TLVEERALPLPDAAVDRILLVHSLEMSDDPDALLREVWRVLAPSGRLLAVVPNRRGVWARIDNTPFGHGRPYSRSQISDL LRRTWFTPIGWSEALFVPPLEQAWLLRWAPAWERIGAAISLPLAGVHVVEATKQVVRPIQAKRERTRLIPSLEPSLVPSP MQADDTDAPLLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28664; Mature: 28532
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDVVNLREFYSNRLGVVARRLINRGIQTRWPDARGQRVLGLGYPTPYLGLFRHNCERC CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH IAFMPAAQGVLKWPTARATLSTLVEERALPLPDAAVDRILLVHSLEMSDDPDALLREVWR HHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLAPSGRLLAVVPNRRGVWARIDNTPFGHGRPYSRSQISDLLRRTWFTPIGWSEALFVPP HHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCC LEQAWLLRWAPAWERIGAAISLPLAGVHVVEATKQVVRPIQAKRERTRLIPSLEPSLVPS HHHHHHHHCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PMQADDTDAPLLPR CCCCCCCCCCCCCC >Mature Secondary Structure TMDVVNLREFYSNRLGVVARRLINRGIQTRWPDARGQRVLGLGYPTPYLGLFRHNCERC CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH IAFMPAAQGVLKWPTARATLSTLVEERALPLPDAAVDRILLVHSLEMSDDPDALLREVWR HHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLAPSGRLLAVVPNRRGVWARIDNTPFGHGRPYSRSQISDLLRRTWFTPIGWSEALFVPP HHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCC LEQAWLLRWAPAWERIGAAISLPLAGVHVVEATKQVVRPIQAKRERTRLIPSLEPSLVPS HHHHHHHHCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PMQADDTDAPLLPR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6209404 [H]