Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is pheT [H]

Identifier: 86747174

GI number: 86747174

Start: 46160

End: 48568

Strand: Direct

Name: pheT [H]

Synonym: RPB_0047

Alternate gene names: 86747174

Gene position: 46160-48568 (Clockwise)

Preceding gene: 86747173

Following gene: 86747176

Centisome position: 0.87

GC content: 68.74

Gene sequence:

>2409_bases
ATGAAACTCACCCTCTCCTGGCTGAAAGACCATCTCGACACCGACGAGCAGCTCGACGCGCTCGCCGACAAGCTCACCAT
GATCGGGCTCGAGGTCGAGGGCATCGAAGACAAGGCCAAGGCGCTGGCGCCGTTCACCATCGCCTTGGTGCTGACCGCCG
AGAAGCATCCCAACGCCGACAAGCTGCAGGTCTGCAGCGTCGACACCGGCGCGGGCGCGCCCGTGCAGGTGGTGTGCGGC
GCCCCGAATGCGCGCGCCGGCCTCGTCACCGTGTTCGCGCCGCCCGGCACCTTCATTCCGGCCAAGGCCATCACGCTGGG
CATCGGCAACATCCGCGGCGTCGAGAGCCGCGGCATGCTGTGCTCGGCCGCCGAGCTTGAGCTCTCCGAGGACCACGACG
GCATCATCGAGCTGCCGGCGGATGCGCCGATCGGCCAGGGCTTTGCAGAATGGGCCGGGCTCGGCGATCCGGTGCTCGAC
ATCAATCTGACGCCGAACCGGCAGGACTGCGCCGGCATTTCCGGCATCGCCCGCGATCTCGCCGCCGCCGGCATGGGCAA
GTTCAAGAACCCGTCGATCAAGCCGATCAAGGGCGACTTCCCCTGCCCGGTGAAGGTCAGCGTCGAAGACGACAAGCTCT
GCCCCGGCTTCGCGCTGCGGCTGGTGCGCGGCGTCAAGAACGGCCCGTCGCCGGACTGGCTGCAGCAGCGGCTCACCGCG
ATCGGGCTGCGCCCGATCAACGCGCTGGTCGACATCACCAACTTCCTGACCTTCGACCGCTCGCGCCCGCTGCACGTGTT
CGACGCCGCCAAGGTCTCGGGCGATCTCGTCGTGCGCCGCGCCAAGGACGGCGAGACGCTGCTGGCGCTCGACGGCCGCA
GCTACACGCTCGACCCCAACGTCTGCGTCATCGCCGACGCCCACGGCGTCGAATCGCTCGCCGGCATCATGGGCGGCGAA
GCCTCCGGCTGCTCCGACGACACCACCGACGTGCTGATCGAATCCGCGCTGTGGAACGAGATCAATATCGCGCAGTCCGG
CCGCCGGCTCGGCATCAACACCGACGCTCGCTATCGCTTCGAACGCGGCGTCGATCCGGCCTTCATGGTGCCGGGGCTCG
ACCTCGCGACGCATCTGGTGATGCAATTCTGCGGCGGCACGCCGTCGGAGGCCGTCGTGGTCGGCAAGGCGTTCGGCGAC
GACCGCATCATCGATTTCCCGCTCAGCGAAGTGAAGCGGCTCGCCGGCATCGAAGTGCCGTTCGTGGAAGTGCGCCGGAT
TCTCACGCATCTCGGCTTCATGGTGGCGGGCTCGGGCGCGGTGGTGAAGGTCGCGGTGCCGTCGTGGCGCAGCGACGTCC
ACGGCAAGGCCGACATCGTCGAGGAAATCGTCCGCATCGTCGGCGTCGACAAGGTGCCGATGACGCCGTTCGAGCGCGGC
GACGCACCGCGCAAGCCGGTGCTGACCCAGATCCAGACCCGCACCCGTCGCGCCAAGCGCGCGCTGGCCGCGCGCGGCCT
GACCGAGGCGGTGACTTGGTCGTTCATTTCCAAACCAAGCGCCGAAGCCTTCGGCGGCGGCCAGCCCGAATTGGCGCTGG
CCAATCCGATCGCCGCGGATCTCTCCGACATGCGGCCGAGCCTGCTGCCTGGGCTGATCGCCGCCGCGCAGGCCAACGCC
GATCGCGGCATCCCGGATCTGGCGCTGTTCGAGGTCGGGCAGATCTTCAAGGGCGACCGGCCGCAGGATCAATTCATCGC
GGCGAGCGGCGTGCGCCGCGGCGTCGCCTCCGCGCAGGGTCTCGGCCGGCACTGGTCGGGCTCGGCGCAAGCGAGCGCGC
TCGACGCCAAGGCCGATGCCTTCGCTGTGCTGGCGGCGGCCGGCGCGCCGATGGCGGGGCTGCAGATCGCGACGAATAAA
TTGCCCGCCTGGCTGCATCCCGGCCGCTCCGGCGCGATCCAGATCGGGCCGCAGAATGTGCTGGGCTATTTCGGCGAGCT
GCATCCGCGCGTGCTCGAGCAGTTGCACGCCGACGGACCGCTGGTGGCGTTCGAGGTGCTCCTCGACAAGATCCCCGACG
CCAAGCAGCGCCCGACCCGCGCCAAGCCGGCGCTGGAATTGTCGGCGTTCCAGCCGGTGTCGCGCGACTTCGCCTTCATC
GTCGACCGCAAGGTCGCGGCTGCCGACCTGGTCCGTGCCGCGCAGGGCATCGACAAGAAGCTCATCACCTCGGTCGGCGT
GTTCGACGTGTACGAGGGCAAGGGCATCGATACCGACAAGAAGTCGATCGCGATCGCGGTGACGCTGCAGCCGCGCGACA
AGACCATGACCGACCAGGAAATCGACGCAGTCGGCGCGAAGATCGTCGCCGAGGTGACGAAGAAGACCGGCGGCGTGCTG
CGCGGCTGA

Upstream 100 bases:

>100_bases
CTCTCCCGCTTGCGGGAGAGGGTTGGGGTGAGGGCGATGCGGGTCGCAGTCCTTCATTTCAGCACGACACACGCACAGCG
CCAGACGGAAGTCACACCCG

Downstream 100 bases:

>100_bases
ATTCGTCGCACCGAGACTAATTCTGCTCCGTCTTATGCCTCACGCACGGCCGTCTTCCTGAGGTGCGCGCTCTTGCGCGC
CTCGAAGGATGCGCAACGGG

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 802; Mature: 802

Protein sequence:

>802_residues
MKLTLSWLKDHLDTDEQLDALADKLTMIGLEVEGIEDKAKALAPFTIALVLTAEKHPNADKLQVCSVDTGAGAPVQVVCG
APNARAGLVTVFAPPGTFIPAKAITLGIGNIRGVESRGMLCSAAELELSEDHDGIIELPADAPIGQGFAEWAGLGDPVLD
INLTPNRQDCAGISGIARDLAAAGMGKFKNPSIKPIKGDFPCPVKVSVEDDKLCPGFALRLVRGVKNGPSPDWLQQRLTA
IGLRPINALVDITNFLTFDRSRPLHVFDAAKVSGDLVVRRAKDGETLLALDGRSYTLDPNVCVIADAHGVESLAGIMGGE
ASGCSDDTTDVLIESALWNEINIAQSGRRLGINTDARYRFERGVDPAFMVPGLDLATHLVMQFCGGTPSEAVVVGKAFGD
DRIIDFPLSEVKRLAGIEVPFVEVRRILTHLGFMVAGSGAVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFERG
DAPRKPVLTQIQTRTRRAKRALAARGLTEAVTWSFISKPSAEAFGGGQPELALANPIAADLSDMRPSLLPGLIAAAQANA
DRGIPDLALFEVGQIFKGDRPQDQFIAASGVRRGVASAQGLGRHWSGSAQASALDAKADAFAVLAAAGAPMAGLQIATNK
LPAWLHPGRSGAIQIGPQNVLGYFGELHPRVLEQLHADGPLVAFEVLLDKIPDAKQRPTRAKPALELSAFQPVSRDFAFI
VDRKVAAADLVRAAQGIDKKLITSVGVFDVYEGKGIDTDKKSIAIAVTLQPRDKTMTDQEIDAVGAKIVAEVTKKTGGVL
RG

Sequences:

>Translated_802_residues
MKLTLSWLKDHLDTDEQLDALADKLTMIGLEVEGIEDKAKALAPFTIALVLTAEKHPNADKLQVCSVDTGAGAPVQVVCG
APNARAGLVTVFAPPGTFIPAKAITLGIGNIRGVESRGMLCSAAELELSEDHDGIIELPADAPIGQGFAEWAGLGDPVLD
INLTPNRQDCAGISGIARDLAAAGMGKFKNPSIKPIKGDFPCPVKVSVEDDKLCPGFALRLVRGVKNGPSPDWLQQRLTA
IGLRPINALVDITNFLTFDRSRPLHVFDAAKVSGDLVVRRAKDGETLLALDGRSYTLDPNVCVIADAHGVESLAGIMGGE
ASGCSDDTTDVLIESALWNEINIAQSGRRLGINTDARYRFERGVDPAFMVPGLDLATHLVMQFCGGTPSEAVVVGKAFGD
DRIIDFPLSEVKRLAGIEVPFVEVRRILTHLGFMVAGSGAVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFERG
DAPRKPVLTQIQTRTRRAKRALAARGLTEAVTWSFISKPSAEAFGGGQPELALANPIAADLSDMRPSLLPGLIAAAQANA
DRGIPDLALFEVGQIFKGDRPQDQFIAASGVRRGVASAQGLGRHWSGSAQASALDAKADAFAVLAAAGAPMAGLQIATNK
LPAWLHPGRSGAIQIGPQNVLGYFGELHPRVLEQLHADGPLVAFEVLLDKIPDAKQRPTRAKPALELSAFQPVSRDFAFI
VDRKVAAADLVRAAQGIDKKLITSVGVFDVYEGKGIDTDKKSIAIAVTLQPRDKTMTDQEIDAVGAKIVAEVTKKTGGVL
RG
>Mature_802_residues
MKLTLSWLKDHLDTDEQLDALADKLTMIGLEVEGIEDKAKALAPFTIALVLTAEKHPNADKLQVCSVDTGAGAPVQVVCG
APNARAGLVTVFAPPGTFIPAKAITLGIGNIRGVESRGMLCSAAELELSEDHDGIIELPADAPIGQGFAEWAGLGDPVLD
INLTPNRQDCAGISGIARDLAAAGMGKFKNPSIKPIKGDFPCPVKVSVEDDKLCPGFALRLVRGVKNGPSPDWLQQRLTA
IGLRPINALVDITNFLTFDRSRPLHVFDAAKVSGDLVVRRAKDGETLLALDGRSYTLDPNVCVIADAHGVESLAGIMGGE
ASGCSDDTTDVLIESALWNEINIAQSGRRLGINTDARYRFERGVDPAFMVPGLDLATHLVMQFCGGTPSEAVVVGKAFGD
DRIIDFPLSEVKRLAGIEVPFVEVRRILTHLGFMVAGSGAVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFERG
DAPRKPVLTQIQTRTRRAKRALAARGLTEAVTWSFISKPSAEAFGGGQPELALANPIAADLSDMRPSLLPGLIAAAQANA
DRGIPDLALFEVGQIFKGDRPQDQFIAASGVRRGVASAQGLGRHWSGSAQASALDAKADAFAVLAAAGAPMAGLQIATNK
LPAWLHPGRSGAIQIGPQNVLGYFGELHPRVLEQLHADGPLVAFEVLLDKIPDAKQRPTRAKPALELSAFQPVSRDFAFI
VDRKVAAADLVRAAQGIDKKLITSVGVFDVYEGKGIDTDKKSIAIAVTLQPRDKTMTDQEIDAVGAKIVAEVTKKTGGVL
RG

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=270, Percent_Identity=27.037037037037, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI1788006, Length=811, Percent_Identity=35.0184956843403, Blast_Score=456, Evalue=1e-129,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 84906; Mature: 84906

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50886 TRBD ; PS00132 CARBOXYPEPT_ZN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLSWLKDHLDTDEQLDALADKLTMIGLEVEGIEDKAKALAPFTIALVLTAEKHPNAD
CEEEHHHHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHCCEEEEEEEEECCCCCCC
KLQVCSVDTGAGAPVQVVCGAPNARAGLVTVFAPPGTFIPAKAITLGIGNIRGVESRGML
CEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCE
CSAAELELSEDHDGIIELPADAPIGQGFAEWAGLGDPVLDINLTPNRQDCAGISGIARDL
EEECCCEECCCCCCEEEECCCCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
AAAGMGKFKNPSIKPIKGDFPCPVKVSVEDDKLCPGFALRLVRGVKNGPSPDWLQQRLTA
HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
IGLRPINALVDITNFLTFDRSRPLHVFDAAKVSGDLVVRRAKDGETLLALDGRSYTLDPN
HCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCEEEEECCCCCEEEEECCCEEEECCC
VCVIADAHGVESLAGIMGGEASGCSDDTTDVLIESALWNEINIAQSGRRLGINTDARYRF
EEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHCCCCEECCCCCCCCHH
ERGVDPAFMVPGLDLATHLVMQFCGGTPSEAVVVGKAFGDDRIIDFPLSEVKRLAGIEVP
HCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCHHHHHHHHCCCCC
FVEVRRILTHLGFMVAGSGAVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFERG
HHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
DAPRKPVLTQIQTRTRRAKRALAARGLTEAVTWSFISKPSAEAFGGGQPELALANPIAAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCCCEEECCCHHHH
LSDMRPSLLPGLIAAAQANADRGIPDLALFEVGQIFKGDRPQDQFIAASGVRRGVASAQG
HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
LGRHWSGSAQASALDAKADAFAVLAAAGAPMAGLQIATNKLPAWLHPGRSGAIQIGPQNV
CCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCEECCCCCCEEEECHHHH
LGYFGELHPRVLEQLHADGPLVAFEVLLDKIPDAKQRPTRAKPALELSAFQPVSRDFAFI
HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCCCCEEE
VDRKVAAADLVRAAQGIDKKLITSVGVFDVYEGKGIDTDKKSIAIAVTLQPRDKTMTDQE
CCCHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHH
IDAVGAKIVAEVTKKTGGVLRG
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLTLSWLKDHLDTDEQLDALADKLTMIGLEVEGIEDKAKALAPFTIALVLTAEKHPNAD
CEEEHHHHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHCCEEEEEEEEECCCCCCC
KLQVCSVDTGAGAPVQVVCGAPNARAGLVTVFAPPGTFIPAKAITLGIGNIRGVESRGML
CEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCE
CSAAELELSEDHDGIIELPADAPIGQGFAEWAGLGDPVLDINLTPNRQDCAGISGIARDL
EEECCCEECCCCCCEEEECCCCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
AAAGMGKFKNPSIKPIKGDFPCPVKVSVEDDKLCPGFALRLVRGVKNGPSPDWLQQRLTA
HHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
IGLRPINALVDITNFLTFDRSRPLHVFDAAKVSGDLVVRRAKDGETLLALDGRSYTLDPN
HCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCEEEEECCCCCEEEEECCCEEEECCC
VCVIADAHGVESLAGIMGGEASGCSDDTTDVLIESALWNEINIAQSGRRLGINTDARYRF
EEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHCCCCEECCCCCCCCHH
ERGVDPAFMVPGLDLATHLVMQFCGGTPSEAVVVGKAFGDDRIIDFPLSEVKRLAGIEVP
HCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCHHHHHHHHCCCCC
FVEVRRILTHLGFMVAGSGAVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFERG
HHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
DAPRKPVLTQIQTRTRRAKRALAARGLTEAVTWSFISKPSAEAFGGGQPELALANPIAAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCCCEEECCCHHHH
LSDMRPSLLPGLIAAAQANADRGIPDLALFEVGQIFKGDRPQDQFIAASGVRRGVASAQG
HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
LGRHWSGSAQASALDAKADAFAVLAAAGAPMAGLQIATNKLPAWLHPGRSGAIQIGPQNV
CCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCEECCCCCCEEEECHHHH
LGYFGELHPRVLEQLHADGPLVAFEVLLDKIPDAKQRPTRAKPALELSAFQPVSRDFAFI
HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCCCCEEE
VDRKVAAADLVRAAQGIDKKLITSVGVFDVYEGKGIDTDKKSIAIAVTLQPRDKTMTDQE
CCCHHHHHHHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHH
IDAVGAKIVAEVTKKTGGVLRG
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA