| Definition | Frankia sp. CcI3 chromosome, complete genome. |
|---|---|
| Accession | NC_007777 |
| Length | 5,433,628 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 86742444
GI number:
Start: 4513251
End: 4515182
Strand: Direct
Name: Not Available
Synonym: Francci3_3764
Alternate gene names: NA
Gene position: NA
Preceding gene: 86742443
Following gene: 86742446
Centisome position: NA
GC content: NA
Gene sequence:
>1932_bases ATGAACCCGACGCCGCAGCCCGATGGTCAGGTACGCAGCGACATCTGCGGGCCTCGGCCCGGCCTGCCGGACCCGCCGGC ACTCGCCCGGTGGGAAGAGGCGCTGCTGTGTCTGCGGGTGTTCGACACGGCGCCGATCATATTCGCGGTCTTCGACCGCG GCCTGCGCTACCGGGCGGTGAACCAGGCGGCTGCCAGGGCCTCCGGCCTGTCCGCCGAGGAGATGATCGGTGGGTATGGC CCGGAGGTGCTCCCGGGCATAGACCCTCTCGGCTGGGAGCGGCTCCGCCGGGTGTTGGCGACCGGTGAGGCGATCCTCGA CGAGGAGATCATCGGAGCGACCCCGGCGGACCCGTCGAATCCGCGCATCTGGCGGGCCTCCTACTATCCCCTGCATGACT CGACCGGGGCCAGAATCGCGGTCGGCGTGACGGCGGTGGACGTGACCGACGAGCGTCGCGCGCAGGCCGAACGTGACCTG GTACTGCGGCGGTTGCGGCTGCTGAGCCGGGCGAGCGGGCTGCTCGGCGCGTCGCTGGACCTGTCGGCCACCTTGCGGGA GATGGTCACGCTGGTCGTCCCGGAATTCGCCGACGCCTGCGAGCTGTACCTCGCCGACGAGCCCTGCCCCCCGGGGGCCG AACCCGACCCGCCGCTGCTTCGCCGAGCCGTGTGGGCACACTCCCCCGACCTGCCCCGACCATCCCCCGACCTGCCCCTC CCCCCACCAGACACAAGAAGCAACCTGACCGGACGCCAGGTCGGACGGGTATTCCTCACCCGCCAACCGGTCCGCCTCGA CCTGGACGAACGGCTCCCCGACGCACCCGACGCACCCGACGCACCCGACGCACCCGACGCACCCGACGCACCCGACGCAC CCGACGCACCCGACGCACCCGACGCACCCGACGCACCCGCGAGCAGCGTGGCCGCCCTGTTCCGGCATTCCCACCTTCGA TCCGCGATCATCGTCCCGCTGCTGGTCGGCCCGCACTGCCTGGGAACCGTCGGGTTCGCCGTCACCGCGGCCCGCCCCTA CCGCGAGCAGGACACCCAGACCGCCACCGAACTGGGCAGCCGGATCGCAACCGCGATCGCGAACGCCCACGCCTTCGACC ACCAGCGGACCGCCGCCCTGACCCTGCAACGCGCCCTGCTGCCCCGCGACATCCCCACCCTGGACGACCTCGACCTGGCC TGGCGCTACCAGCCCGGCACCAGCGGCACCGAGGTCGGCGGCGACTGGTTCGACGTCATCCCCCTGCCGGCCGGACGGGT CGCGCTGGTCATCGGCGACGTCATGGGCCGCGGCCTGAACGCCGCCGCCGCCATGGGCCAGCTACGCACCGCCGCCCGCA CCCTCGCCCGCCTCGACCTGCCCCCCGCCGCCCTGCTGACCGAACTCGACGCCGTCACCCGCAGCATCGACACCATCGCC AGCGTCGCCTACGTCATCCAGGACCCGGCCACCAGCACCCTGACCGTGGCCAACGGCGGCCACCTCCCCCCCGCCCTGCG CCACCCCGACGGCACCGCCGACCTCCTCGACGACCCCCACGGGATCATCCTCGGCGTCACCGAACAGACCTTCACCGAAA CCCGCCACCGCTTCCCCCCCGGCTCCACCCTCGCCCTCTACACCGACGGCCTCGTCGAATCCCCCACCGTCGACATCGGC GAGGGCTGCCGACGCCTGCTGCGCATCCTCACCGAAACAGCCGACCTGCCCACCACCGCGGACCGGCTACTGACCCTCCT CAACCGCAACGACGGCAACGACGGCTACGACGACGACGTCACCCTCCTCCTCGCCCACGCCCGGCGGGGTCGGCGAGCTC AGACCGAGAGCAGCCCATGCTCCGCGCACCGGGCCGACCAACCCACCGGGGTGACCTGGACGACCATCCGCCGCCGGCAG GCTCGACAGTAG
Upstream 100 bases:
>100_bases CGCGCAGGAGGTGGACCTGCTTCACACTTGGATGCGTCTCTACCCGCCCGAGTCTCCGACGGTGACCGGCGGCTCCGGCC CCGGCAGGACTGGTCCCGAG
Downstream 100 bases:
>100_bases CGGGGTGGCTCCAGATCGCGGGCCCGCCGGCAGGCCTCGTGGCTGCCCACACTGGCCAACTGACCGCAACGGTCACAAAA CGCGGCGTCCATAATGGGCA
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>643_residues MNPTPQPDGQVRSDICGPRPGLPDPPALARWEEALLCLRVFDTAPIIFAVFDRGLRYRAVNQAAARASGLSAEEMIGGYG PEVLPGIDPLGWERLRRVLATGEAILDEEIIGATPADPSNPRIWRASYYPLHDSTGARIAVGVTAVDVTDERRAQAERDL VLRRLRLLSRASGLLGASLDLSATLREMVTLVVPEFADACELYLADEPCPPGAEPDPPLLRRAVWAHSPDLPRPSPDLPL PPPDTRSNLTGRQVGRVFLTRQPVRLDLDERLPDAPDAPDAPDAPDAPDAPDAPDAPDAPDAPDAPASSVAALFRHSHLR SAIIVPLLVGPHCLGTVGFAVTAARPYREQDTQTATELGSRIATAIANAHAFDHQRTAALTLQRALLPRDIPTLDDLDLA WRYQPGTSGTEVGGDWFDVIPLPAGRVALVIGDVMGRGLNAAAAMGQLRTAARTLARLDLPPAALLTELDAVTRSIDTIA SVAYVIQDPATSTLTVANGGHLPPALRHPDGTADLLDDPHGIILGVTEQTFTETRHRFPPGSTLALYTDGLVESPTVDIG EGCRRLLRILTETADLPTTADRLLTLLNRNDGNDGYDDDVTLLLAHARRGRRAQTESSPCSAHRADQPTGVTWTTIRRRQ ARQ
Sequences:
NA
Specific function: NA
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA