Definition Frankia sp. CcI3 chromosome, complete genome.
Accession NC_007777
Length 5,433,628

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 86742425

GI number:

Start: 4485421

End: 4490505

Strand: Direct

Name: Not Available

Synonym: Francci3_3745

Alternate gene names: NA

Gene position: NA

Preceding gene: 86742423

Following gene: 86742427

Centisome position: NA

GC content: NA

Gene sequence:

>5085_bases
ATGACGACGCAGACCGCCGGCCCCGAGCGGCATGCCGCCCTCGCGGACCGCTGTCACCGGCTGGTGCGGTTCCTCCATGA
GGTCGCGGCGGCCCGGTCGGGCCGGATCCGGACCATCGAGGAGCATCCGCTCACGGTGTGGCTCGCCGACATCCCGGCCG
GCGTGCCGCTGTCCGAGCACGCCGGGGCCGGCGAGGTGCTGCTGACCGCCCCCGCCGCCACCGTCCTACCCCCACCGCCG
CCACCGCCCGCGATCCTCGCCGGCCAGATCGTGCTGCCCGACGCGGCCGGCGCCGATCCCGACCAGCCGCCGGTGTGGAA
CGGCGCCGCCGCCGAGCAGACCGCCGCCGAGCAGACCGCCGCGGCGGCGGCCTACCAGGCCTGGTTGCCGCGATGGCAGC
TCTGGGCGACACGCGCGCGCGTTGACGCGGAGCGACGCAATCTGCACAACACGCTGCACGCGGTCGCGGCCCGGGTGGCC
CAGGAGGGTGACGCGCTGGAACTCGTGCTGGCGACCGGCCTGCTGACCTGGCAGCCACCGGGCGGCCCCACCGTCCGCGA
GCACCTGCTGACCACCCGGCTGACCTGCGACATCGACCCGGTCACCTCCGATATCAGGGTGCGGGTCCCGGCGGGGGCCA
CCACGCGCCTCGCCGACGGCCCGCTACTCGACGGCATCGCCGGCTTCCGCCGGGAACGGACGAACGCGCTGCACGAGCGC
CTGCGGGGACGACCGTCGGCGCCACTGGGTCCGGACGACATCCGGCTGCTGCGGGACTGGCTGGCGCTGGCGCTCGACGT
GCCGACGGACGGCTTCGAACCCGACCTCGCGCCGCCCGCGCCCGACAGCGCGTCACGCCCGCGGGTGACCTTCGCCCCGG
CCTTCGTCCTGCGCACCCGTGACCAGGCCGCCCTGCTGACCTACTACGAGCGGATGCTCGACGTCCTGCGGGGTGACGGA
CCTCCGCCGCTCGGCCTCGTCCAGCTGGTGGAGACCCTCGACGCCGCCGACCGGTTGGCCTGGCTCGAGGCAGAGGGAGC
GACGAGCGGCGCCGAACTCGGTGCGGACCCGCTGCTCCCGCTCCCGGCCAGTCCCGAGCAGGCCCGGGTGCTGGAGCGGC
TTCGCCACGACAACGGCGTCGTCGTCGAGGGCCCGCCCGGCACCGGCAAGACGCACACGATCGCCAACCTGGTCTGCGCC
TTGCTGGCGGAGGGGCAACGGGTTCTGGTCACCAGCCAGAAGTCGCAAGCCCTGCGGGTCCTGCGGGAGAAACTGCCCCC
GGACCTGCAGCGGCTGTGCGTGTCGTTCACCGATACCGAGGAGGCGCGCGACGCACCGGTCGACCAGGCCGGGAACGCGG
GGGCGGACCTGGACGGCCGGCCCGACGCAGTCTTCGACCCCGCCCCGGCCGGGGCCGAAGACGAAGCGGACGAGCTTGGC
GGCATCGGCGTGGGTTCCCCCGAGCTCGCCGCGAGCGTGAGCGCCCTGGCCGCGGAGAAGGCCACCTATCACCCCGAGGC
GCTCGACCGGCGGATCGTGCGGGCCGCCGCGCGCCGGCAGGAGGCGATCCGCGCCCGCGATGTCCTGGCGGACCGGGCCC
GCGCCCTGCGGTTGGCCGAGCACACGGTGCATCCGGACAGCGAGGTGGCCGCGGGCTGGGGCGGGACGCGGGCGAGCATC
GCGGCGCGGGTCCGGGCCGAGGCCGACGCGTCGCGGTGGCTGCCGCGGCCCGTGCCCCGGAGCGCGGCAGCCACCACCAC
CGCGAGGACCACGGCGACGGGGTCCGGGTCTGTCGGCCCTGCGCCGGTTCCCCCGCCGTTGACCGACGCCGAGGCGCTGG
AGCTCCACGCCCTGCTGCGATCCGGTCAGGTGCGATCCGGTCAGGTGCGATCCGGTCAGGACGTCGGCGCGGACCGGTCC
GCCGGCCCGGTGGTCGAGATGAGCCGATTCCTACCCGCCGAGCGGTTCGCGGACCTGGTGGCCACCGCCCGCGCGGCCGA
CGAGGCGGTCCGCCTTGCCCGCGCGGCCGTCCGTCCCGCGACCCGGGGTCTCCTCGACACGCTCGCCGCCGTCGATCCCG
CGGTGGTCTCCCTCGATCCGCTACAGCAGGCGGTCGCCAGCCTCTCCCGCGCGCTCGAGGAGCTCGACGGGCGCGGGCAG
CGGTCGAACAGACGGCACTGGGTTCCGGCGGCCCTCGACGACGCCCTCGCCGGCCGGGACCGGGTCCTCTGGGCGAAGGT
GGCCGCGGCCACGCCGATGATCGCCGAGGCGACGCGGCACGTGACCGAGCTCGGTCTGCACGCGGTCGCCCTTCCGACCT
CCGCCTCCCCGGACGGCTCCGCCTCGGCGGCCGACGCCGGCTCCCCGGCGGATCCGGGCTTCGACCCCGCCGCCCTGCTC
GCCCGGGGGGAGGCGCTGCGCGAGTACCTCGACGCCGGGGGCGAGCTACGGCGCAGGTTCCGGCCGAAGGTCCAGAAGGA
GGCGGACACGCTGCTGACCCGGACGCTGGTGGACGGCGTCGCGCCGACCACCCCGGAGCTGCTCGATCTCGTGCTCGTCC
GGCTCCGGGCGGAGGTCGCGGTCGAGGCCGCGACCCGCGGATGGGTCCTGGTCGGGATCGCGCCGCGGCCCACCGATCCC
TTCGAGGTACGCCTGTCCCGGCTGGTTGAGGCGCAGGAGGCCGTCACGGAGATCCAGGCGATCGTGGCGGCGCGGAACCG
GGTCGTGGCAATCCTGGAGGACATCGTGCCCGGCCGGGCACCGGCGATGGACTCCGCCGAGCGCGTCCGGGATCTCGCGG
CCGTCATGGCCGCGCTGCGCCCGATGGCAGCCGCCACCGACGCCGAGCGGGCGCTGGGGGAACTGCGGGAGGGCTACGCC
GGGCTTGCCACCGCGGCGGGCACGCCGTCCGAGGTCGCCGAGCTGGCCGGCGCGGTAGCGGCCCGCAATGTGGCCGCGTA
CACGCGGACCCGGGCCGCGCTCGCCACCACCATGGCTGCCCGGGAGGTGGCGCTGCGCCGGGACGAGCTGCTCGGCCGGC
TGCGCGCGGCGCATCCCGACCTCGCCGATCTCCTCGTCTCGACGGCCGGCGCGACCCGGCCCAATGGAGCGGAGATCTGG
CCGGCCAGGCTCGCGGCGTTCACGACCGCCTGGTCCTGGGCGGTGGCCGCGAGCTGGCTGACCGCCACGGCCCCCGGCGC
CGCCACGGCCCCCGGCGGCCCGGCTGGACCACCTGTCGATCTGGACGCCGAGCTGGACGCGGCGGAGGACATGGTCGCCG
CGGCCACCGCGGAGCTGGCCGGCGCCCGCGCGTGGAAACACTGCCTCGAACGGATGGGCGCCGAGCAGTCGGCCGCGCTG
CGCGCCTATGCCGACGCGGTGGCGGCCAGCGGCACCTTCGGCGGCCGCCACGCCGAGCGTTTCCGCCAGGCCGCCCGGGA
GGCGATGGAGATCGCCCAGACGGCGGTGCCGGCCTGGGTCATGCCGATCCGGGAGGTGCTGTCGACGATCCCGGCGGTGC
GCGACAGCTTCGACGTCGTGATCGTCGACGAAGGCAGTCAGGCCGGGCTCGACAGCCTGTTCCTGCTCTGGCTCGCCCCA
CGGGTGATCGTCGTGGGCGACGACCGGCAGTGCACGCCGCCGGTGGAGGTCACGGACGAGCTCGACCGGGTCTTCGACCG
GCTGGAGGCCCTGCTGCCGGAGGTGCCGGCGTGGCTACGCGTCGGGTTCACCCCCCGGTCGAGCCTGTTCACGCTGTTGC
GAACCCGCTTCGGCGAGGTGATCCGGCTGCGGGAGCACTTCCGGTGCATGCCGGAGATCATCGAGTGGTCGTCGGCCATG
TTCTACCGGGACGCGCCGCTGCTTCCCCTGCGCCAGTTTGGCGCCGACCGGCTGCCGCCGCTGGTGGCCCGGTTCGTTCC
CCACGGTTTCACCACGGACGCGGGCCTCGGTCCACGCAATCCGGCCGAGGCCGATGCCCTGGTCGCACAGGTGCTCTCCT
GCGCCGAGGATCCCCGGTACGCCCGGCTCTCCTTCGGCGTCGTCGTCCCACAGGGCACCGCACAGGCGGCGCTGATCCGC
GACCAGCTGGCCGACCGGATGTCCGCCGCCGAGCACCAGCGTCGACGGCTGCGGGTGGGCGTCCCCGCCGACTTCCAGGG
TGACGAGCGCGACGTCGTCTTCCTGTCCCTGGTGGTGGCGCCCGACTCGCGCATCACCCCGCTGACCCGGCTGGAGTACC
AGCGGCGGTTCAACGTCGCGGCCTCCCGGGCCCGCGACCAGGTCTGGCTGTTCCACTCCGTACCGGTCACCAATCTTGAC
CCTCGCGATCTGCGGCACAACTATCTGAGCTACGTGCTGTCCACGACGCACCCGGCGGCCGGCGGCCGCGGCGAGGAGCC
CCCGGCACTCGCCGAAGTGCCGACCAACCGTCCGCATCCGGCCTTCGGATCCCTGTTCGAACAGCGGGTCTTCCGGGAGA
TCGTCGGCCGCGGCTACCTGGTCACCCCGCAGGTGGAGATCAACGGTCGGCGGGTCGACCTGGTCGTCTCCGGCGGTCGG
GCCCGGCTCGCCGTCGAGTGCGACGGGGACGTCGGCTCCGGTCCGGACGAGATCGCGCACGAGTTCGCCCGGGAGCGCGA
GCTGCGCCGGGCGGGCTGGCGGTTCTGGCGGGTCCGCCAGTCCGAGTTCGAACTCGACGCCGACGCCGCGTTGGCCTCGT
TGTGGCCGCGGCTGGCGAGGGCCGGTATCGCGCCCGTGAACACCGGGGCGCGAGGACTGCGGGACGAGGCCGCCACCGGC
CTCCCCCGCGTCGAACATTCCACCGTCCGGGCGAGCGCCGACGAGGCGCTGCACCGGTGGCGGCCCATCGCCCTGTCCGA
TCTGGAGGGCCTCGACGACGCACCGCCGGACGCCGATCCGCGCGGTTCGGCCCGTGATTCGGCCCCTGCCCTCCGGCGAG
GCACGGGCACGGCCCCGGGCGCCGGTGGGGGAGACTGCTCCCCGCGTGCCGAACGGGTCGGTCAGGCCGGCGGCCCGGTC
ACCCCGTCCGGTTCGAACGGCGCCGGCAGGACGTCGGGATCGTGA

Upstream 100 bases:

>100_bases
CGGGAGAACAGCGCCGACGGGAGGAAAGTCACGTGTCGACAACCGACGGACGGCGTTTCCCTCCCGGCGCGGGCGCCGGG
ATCTCCAGAGCGAGGTCCTG

Downstream 100 bases:

>100_bases
TCGTCGTGGGATGCCTCGACACCTGCTCCGGCGCCCGGCCGGTCACGGGGTGTCCGGGCCGCCGGCTTCCGCGTCGATCG
GGGGTGAGGCACCGGCCGGC

Product: superfamily I DNA/RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1694_residues
MTTQTAGPERHAALADRCHRLVRFLHEVAAARSGRIRTIEEHPLTVWLADIPAGVPLSEHAGAGEVLLTAPAATVLPPPP
PPPAILAGQIVLPDAAGADPDQPPVWNGAAAEQTAAEQTAAAAAYQAWLPRWQLWATRARVDAERRNLHNTLHAVAARVA
QEGDALELVLATGLLTWQPPGGPTVREHLLTTRLTCDIDPVTSDIRVRVPAGATTRLADGPLLDGIAGFRRERTNALHER
LRGRPSAPLGPDDIRLLRDWLALALDVPTDGFEPDLAPPAPDSASRPRVTFAPAFVLRTRDQAALLTYYERMLDVLRGDG
PPPLGLVQLVETLDAADRLAWLEAEGATSGAELGADPLLPLPASPEQARVLERLRHDNGVVVEGPPGTGKTHTIANLVCA
LLAEGQRVLVTSQKSQALRVLREKLPPDLQRLCVSFTDTEEARDAPVDQAGNAGADLDGRPDAVFDPAPAGAEDEADELG
GIGVGSPELAASVSALAAEKATYHPEALDRRIVRAAARRQEAIRARDVLADRARALRLAEHTVHPDSEVAAGWGGTRASI
AARVRAEADASRWLPRPVPRSAAATTTARTTATGSGSVGPAPVPPPLTDAEALELHALLRSGQVRSGQVRSGQDVGADRS
AGPVVEMSRFLPAERFADLVATARAADEAVRLARAAVRPATRGLLDTLAAVDPAVVSLDPLQQAVASLSRALEELDGRGQ
RSNRRHWVPAALDDALAGRDRVLWAKVAAATPMIAEATRHVTELGLHAVALPTSASPDGSASAADAGSPADPGFDPAALL
ARGEALREYLDAGGELRRRFRPKVQKEADTLLTRTLVDGVAPTTPELLDLVLVRLRAEVAVEAATRGWVLVGIAPRPTDP
FEVRLSRLVEAQEAVTEIQAIVAARNRVVAILEDIVPGRAPAMDSAERVRDLAAVMAALRPMAAATDAERALGELREGYA
GLATAAGTPSEVAELAGAVAARNVAAYTRTRAALATTMAAREVALRRDELLGRLRAAHPDLADLLVSTAGATRPNGAEIW
PARLAAFTTAWSWAVAASWLTATAPGAATAPGGPAGPPVDLDAELDAAEDMVAAATAELAGARAWKHCLERMGAEQSAAL
RAYADAVAASGTFGGRHAERFRQAAREAMEIAQTAVPAWVMPIREVLSTIPAVRDSFDVVIVDEGSQAGLDSLFLLWLAP
RVIVVGDDRQCTPPVEVTDELDRVFDRLEALLPEVPAWLRVGFTPRSSLFTLLRTRFGEVIRLREHFRCMPEIIEWSSAM
FYRDAPLLPLRQFGADRLPPLVARFVPHGFTTDAGLGPRNPAEADALVAQVLSCAEDPRYARLSFGVVVPQGTAQAALIR
DQLADRMSAAEHQRRRLRVGVPADFQGDERDVVFLSLVVAPDSRITPLTRLEYQRRFNVAASRARDQVWLFHSVPVTNLD
PRDLRHNYLSYVLSTTHPAAGGRGEEPPALAEVPTNRPHPAFGSLFEQRVFREIVGRGYLVTPQVEINGRRVDLVVSGGR
ARLAVECDGDVGSGPDEIAHEFARERELRRAGWRFWRVRQSEFELDADAALASLWPRLARAGIAPVNTGARGLRDEAATG
LPRVEHSTVRASADEALHRWRPIALSDLEGLDDAPPDADPRGSARDSAPALRRGTGTAPGAGGGDCSPRAERVGQAGGPV
TPSGSNGAGRTSGS

Sequences:
NA

Specific function: NA

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA