| Definition | Frankia sp. CcI3 chromosome, complete genome. |
|---|---|
| Accession | NC_007777 |
| Length | 5,433,628 |
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Identifier: 86742139
GI number:
Start: 4116418
End: 4120326
Strand: Reverse
Name: Not Available
Synonym: Francci3_3456
Alternate gene names: NA
Gene position: NA
Preceding gene: 86742142
Following gene: 86742135
Centisome position: NA
GC content: NA
Gene sequence:
>3909_bases TTGAATGACGTCATGGGCTACGCCCTGCTCAGTCTGGGCACGGGCGCGCTCTACGCCCTCGTGGCCTCGGGTGTGGTGGT CATCGCCCGCGGGGCCGGCGTGCTCAACCTGGCCCAGGGCGCGCTGCTGGCCTGGGCGGCCTATGCCTTCCATGGGCTGC ACGCCGGGTGGGGGCTGCCGCTCGGCCTCGCGGCGCCGCTGGCCGTGCTGTCGACGACCGTCATCGGGGTCGTGTTCCAC CTGCTGGTGATGCGGCCACTGCGCGAGGCGACCTCGCTGCTGCGGCTGATGGCGACGCTCGGCCTGCTGATCATCTTGCA GTCGTTGCTGACGCTGATGTTCGCCGGTGCCGTGCGTACCTCCCCGACGGTGCTGCCGACCGGCAGGATAACGCTGTTCG ACGAGCCCGTCGGCGTGTCCGTGTTCGTCCGGCTGGCTGTGGTCGCCGTGCTGGTCGCGGGGCTCTGGGCGGTGTTCCGG TTCACCACGGTGGGCCTCGCCGCGACGGTGGCGGCGGAGAACCTCAGGGCCGCCGCGACCTTCGGCTGGTCGGCGGACAC CGTCGCCGCCGCTGCCTGGGGCGCCGGCAGCGCGCTGGCCGGTCTCGGCGGGGTCCTGCTCGCGCCGCTGCAGAACCCGT TGTCCTCGGCGAACCTGCTCCTGCTCATCGTCCCGGCGCTGGCGGTCGCGCTGGTCGCGCGGTTTCGCTCCTTCCCGATG GTGCTGGCGGGCGGGCTCGCCCTCGGGGTCGTCGAGGTGGAGACCCAGTTCCAGCTGGTCGCCGAGCACCCCTGGTGGCG CGGGGTCGACCGGGCTGTGCCGCTGGCGGTCATCGTCTTCTACCTCGCGATCCGCGGGCAGGGAATACCCGAACGCGGCC ACCTCGCCGAACGTCAGCCTGCCCTCGGTAGCGGCCGGGTGCATCCGCGCGCCCTCGCGGTCACCGTGGCGGCCACCCTG GCGGCGATCTGGTGGCTGCTGCCGGTTGACTGGGTCGACGCGATCGACGCGAACGCCCTGTGGGCGCTGGTCATCCTGTC CGTCGTCGTGCTCGTCGGGTTCACCGGGCAGTTGTCCCTGGCGCAGCTCGCCTTTTCCGGCATCGCGGCGTTGATCGCCG GACGGCTCGTCGCGACCCGCGGCTGGCCGTTGGAGGCGGCCATGCTCGTCGGGGTCGCCGGCACGGCCGCGGTCGGACTG TTGTTCGCCCTGCCGGCGCTGCGGACCCGGGGCCTGCAGCTCGCGGTGGTGACCCTGGGCCTGGGCACCGCCGTCGACGC TCTGCTGTTCCAGCGCGGCTACCACTCCCCGGCACCGAGGAGCGCGGGCTCCATCGGTTCGCTGTTCGGCGATCTGGCCT CCCCGGAGGGCACGGTCGTCGGCCGTCAGACATTCCTCGGCATCGAGTTGGACAAGGTTGCCAACCCCCGCGGGTTCGCG ACCGTCTCCGTCCTCGCCTTCGTCCTCGTCGCGCTGGCCGTCGCCAACCTGCGGCGCGGGCGCGCGGGCCGGCGACTGAT CGCGGTGCGGACCAACGAGCGGGCCGCCGCCGCGCTCGGCATCAGCGTGGTCGGCGCGAAGCTCTACGCCTTCGCGCTGT CGGCGGCCATCGCCGGATTCGGCGGGGTGCTCTATGCGTTCTACGTCTACGGGGAGCGCGGGAACATCGACTATGGCGGT GGCGCCTTCGCGCCGTTCTCGTCGATCATGCTCATCGCCTACGCGGTGCTCGGCGGGGTCGGCTGGGTCAGCGGGGCGTT CGCCGGGGCGACGATGGCCGCCGGGGCGCTCGCGACCCGGCTCGGCGGCTGGGTCGGCGACCTGCTCGCCCGGCTCGGCG TGCTGCTGCGGGTCGTCGTGGCGGCCCTCGCCGGGCTGCTCGGCCTCGCCGCCGGTGCCTCGCTCGTCAGCGCGCCGCGC CCGCGCCGCCGGCTCGGCGCCGCCGCCCGGTACGCCCCCTGGGCCGTCGCCGCCGTCGCCGCCCTGGTCGCAGCGGTCTT CGGCGGCTGGGTGCGGGACTGGCTGGCCGAGCTCGACCGCTACGTGCCGCTGATCGGCGGGATCGTCCTCGTCGTCGTGC TGTCCCGGTCGGGTGGGGGCATGGCGCCGGAGAACGCCCGCACCGCCAGGCTGCTCCACGACCGGGTCCCGGCGGCGGCC GCCCGCCGCCGTCGCCGCGATGCCGCCCGCCTGGCCCGCCTGCTCGGCGCGCCGCCCGCCGCGCTGCCCGCCGTGCCCGC CGTCCTGTCGGTCTGGGGTCTGACGGTCCGGTTCGGCGCGGTCACCGCGGTGCGCTCGGTCGACCTGCGGGTGGAACCCG GTCAGATCGTCGGGATGATCGGCCCGAACGGCGCGGGCAAGACGACGGTCATCGACGCGATCACTGGTTACACCCCGTCC TCGGTCACGTCGGTCACGTCGATGACGTTGGGCGGCGTCCGGCTGGACCGTCTGCCGGCGCACCGGCGGGCCCGCGCCGG CATCAGCCGGTCGTTCCAGAACCTGGAGCTGTTCGACGATCTGACGGTCATCGAGAACATCCAGGCGGCCAGCGACCGCC GGGACACCCGCGCCTATCTCACCGACCTGCTGTTCCCCCGGGGACGTCCGCTTGAGCCGGCCGCGGTCGCCGCGGTCGAC GCCTTCGGGCTGCGCGACGATCTCCTGCGCACCGTGGCGGAGCTTCCCTACGGTCGTCGTCGGCTGCTGGCCATCGCCCG GGCCGTCGCGGCGCGCCCCGCCGTGCTGCTGCTCGACGAGCCGTGCGCCGGGCTGGACGAATCGGAGAGCGCGGAGGTCG CGGGCCTGCTGCGTCGGCTCGCCGACGACTGGGGACTGGGCATCCTGCTCAACGAACACGACATGGACGTGGTCATGGGG GTCTGCGACCGGGTGGTCGTGCTGGACGCCGGGGAGCGCATCGCCGAGGGGACGCCGGAGCGGGTGCGCGACGACCCCCG GGTGCGGGTCGCCTGCCTGGGGGAGGCGGCGGTCCCGGCCCGGCCGGCCGTCTCCTGGACTCGGCCGGCCGTCTCCTGGA CCCGGCGGGCCGTCTCCTGGACCCGGCGGGCCGTCTCCTGGACCCGGCCGGCCGGCCCGTCCGCGGGCGGGACCGGGGAC CGCGTCGCCGACAGGACGGACCCGGCCCGGTTCGCGGCCGGCCCCGCGGTGCTGGCGGCGCGGGGCCTGTCCGCCGGCTA CGGCAACGGCCCGGTGGTCCGCGACCTCAACCTGGAGGTTCACGCCGGCGAGGTCGTGACCCTGCTCGGCCCGAACGGCG CCGGCAAGACGACGACACTGCTGGCGCTGGCCGGCGCGATCCCGTCGGCGGGAGGCGAGGTCCTGCTCGCCGGGGCCGTG ACGACCGCCGCGCTGCACGAACGGTGCCGACGTGGCCTGAGCCTGGTTCCCGAGGAACGCTCGGTCATCATGGACCTCAC CGTCCGGGAGAATCTCCGGGTCGGTCGATGCGACCCGGACCTCGCCCTCGCGGTCTTCCCCGAGCTTGCCGAGCACCTCG ATCGGCGGGCGGGGCTGCTCTCCGGGGGGCAGCAGCAGATGGTGACCCTCGCGCGCGCCTTGGCGCGCCGGCCCACGGTT CTGCTCGCCGACGAGCTCTCGCTGGGCCTCGCGCCGCGCGTCGTGGACCGTCTGCTGGCGGCGGTGCGCGCCGCCGCGGA CGATGGGCTCGCCGTGATCCTCGTCGAGCAGCACGTCCGCAGCGCCCTGTCGATCGCCGATCGGGTGCACGTCCTGCGGC ATGGGGCCCTCGCCTGGTCGGGCACCGCCGCCCAGGCCCGTGCCGACCGGGAGACCCTGCTCGGCGCCTATCTGTCACCC GGACGGCCGGCGGACTCCGGCAATGGCGCCCCATCCGGCAATGGCGCCCTCAGCGGCCCGCGTGCCTGA
Upstream 100 bases:
>100_bases CGCTCATCGCGATCGAGGAGAGCCGGCGACCATTGGTGGGGGGCCGCTGAGGGATGATCGAGGCACCGTTCCGCGGTGCC CGGAGCAGGGTGGACCGCCG
Downstream 100 bases:
>100_bases CCCGGGTCAGCGCGTGCCTCAGAGTCAGGAGGCGGCCCGGCGCAGGATGTCCAGGCCGGAGTAGGTCTCCGGGCCGAGTG GCACGAAGCTCTTCGACGCG
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1302_residues MNDVMGYALLSLGTGALYALVASGVVVIARGAGVLNLAQGALLAWAAYAFHGLHAGWGLPLGLAAPLAVLSTTVIGVVFH LLVMRPLREATSLLRLMATLGLLIILQSLLTLMFAGAVRTSPTVLPTGRITLFDEPVGVSVFVRLAVVAVLVAGLWAVFR FTTVGLAATVAAENLRAAATFGWSADTVAAAAWGAGSALAGLGGVLLAPLQNPLSSANLLLLIVPALAVALVARFRSFPM VLAGGLALGVVEVETQFQLVAEHPWWRGVDRAVPLAVIVFYLAIRGQGIPERGHLAERQPALGSGRVHPRALAVTVAATL AAIWWLLPVDWVDAIDANALWALVILSVVVLVGFTGQLSLAQLAFSGIAALIAGRLVATRGWPLEAAMLVGVAGTAAVGL LFALPALRTRGLQLAVVTLGLGTAVDALLFQRGYHSPAPRSAGSIGSLFGDLASPEGTVVGRQTFLGIELDKVANPRGFA TVSVLAFVLVALAVANLRRGRAGRRLIAVRTNERAAAALGISVVGAKLYAFALSAAIAGFGGVLYAFYVYGERGNIDYGG GAFAPFSSIMLIAYAVLGGVGWVSGAFAGATMAAGALATRLGGWVGDLLARLGVLLRVVVAALAGLLGLAAGASLVSAPR PRRRLGAAARYAPWAVAAVAALVAAVFGGWVRDWLAELDRYVPLIGGIVLVVVLSRSGGGMAPENARTARLLHDRVPAAA ARRRRRDAARLARLLGAPPAALPAVPAVLSVWGLTVRFGAVTAVRSVDLRVEPGQIVGMIGPNGAGKTTVIDAITGYTPS SVTSVTSMTLGGVRLDRLPAHRRARAGISRSFQNLELFDDLTVIENIQAASDRRDTRAYLTDLLFPRGRPLEPAAVAAVD AFGLRDDLLRTVAELPYGRRRLLAIARAVAARPAVLLLDEPCAGLDESESAEVAGLLRRLADDWGLGILLNEHDMDVVMG VCDRVVVLDAGERIAEGTPERVRDDPRVRVACLGEAAVPARPAVSWTRPAVSWTRRAVSWTRRAVSWTRPAGPSAGGTGD RVADRTDPARFAAGPAVLAARGLSAGYGNGPVVRDLNLEVHAGEVVTLLGPNGAGKTTTLLALAGAIPSAGGEVLLAGAV TTAALHERCRRGLSLVPEERSVIMDLTVRENLRVGRCDPDLALAVFPELAEHLDRRAGLLSGGQQQMVTLARALARRPTV LLADELSLGLAPRVVDRLLAAVRAAADDGLAVILVEQHVRSALSIADRVHVLRHGALAWSGTAAQARADRETLLGAYLSP GRPADSGNGAPSGNGALSGPRA
Sequences:
NA
Specific function: NA
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA