Definition Frankia sp. CcI3 chromosome, complete genome.
Accession NC_007777
Length 5,433,628

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The map label for this gene is Not Available

Identifier: 86741982

GI number:

Start: 3902288

End: 3903724

Strand: Direct

Name: Not Available

Synonym: Francci3_3296

Alternate gene names: NA

Gene position: NA

Preceding gene: 86741981

Following gene: 86741983

Centisome position: NA

GC content: NA

Gene sequence:

>1437_bases
GTGAGCCAGACGATCGCCTTCCTGCGCGCGGCGGGAGGCGACACCACCGAGGTGGAGGTCAAGTCTGCCGCCGGCGGGTT
ACCCGCCTCGTTGACCTCTACGCTGAGCGCGCTGGCGAATCAGCCCGGGGGCGGGACCATCATCCTGGGACTCGACGAGC
GGGCCGGGTTCCGCCCCGTCGAGCTCAGCGACCCGCAGGTACTCAAGCAGGGCCTGGCTGCCAGGGCCCGGGCATTCACA
CCGCCGGTCCGTCTCACGATCGAAGACGGGGAGGTTGACGGGGCCGCGGTCGTGGTTGCGCAGGTCCAGGAGTGCGACCG
GTCGACCAAGCCCTGTCGCGTCACCGCGACCGGCAGGGCGTACCTACGTGGCTACGACGGCGACTACGCCCTGTCTGACG
TGGAGGAACAGGGGTTCCTGGCCGCTCGCCAGCCACCGCTGTTCGACCGTTCACCTGTCGAGGACGCCACCATCGACGAG
CTGGACACCGAACTCGTCGATGCTTTTCTACTCGCTGTCCGCGAACGCGACCCGGCCGGGCTCGGCCGTTTTCCCGACGA
CACCGAGCTCCTACGCCGGGCTGGGGTCACGATGGATGGCGGGCAGCCAACTGTCGCGGGACTGCTCGCTCTCGGGGTCC
ATCCCCAACAGTGGTTCCCTCGCTACGTCATCCAAGCCGCCGCGCAGCCCTTGCCCACCGGCTCCGCCGCAACGCGGGCC
CGCAACCAGGTCACCATCAGCGGACCGGTCCCGCGGATGCTCGACGCGGCGCTGCTCTGGGCCCGACATACCTTCGACAC
CGCCATCGTCGCCGAGATGGACGGCAGCGTTCGTGACCGTCCGATCTACCCACTCGTCGCCTTCCGTGAGCTGGTCGCCA
ACGCGCTGATCCACCGCGACCTCGATCACTGGTCCGCCGGGCTGGCCGTCGAAGTGCGGCTTCTGCGGGACCGCCTGGTA
GTGACCAATCCCGGCGGCCTGTACGGCATCACCGTCGACCGGCTCGGACGCGACGCGGTGACCTCCGCCCGCAACGCCAG
CCTGGTCGCGATCTGCCAGCACGTCCGCTCTGCGCAGACCGGAGCTCGGGTTATCGAAGCCCTCGCCAGCGGGATTCCCA
CCGTCACCGAGGCTCTCGCCGACTGTGGCCTGCCGTCAGCCCACTACGTGGACAGCGGCATCCGGTTCACCGTCATCCTC
CACCAGTTCGCGACCGCCACGCCCGTGGCAACCGCCGAGCCCCCGCTGGGCGCCACGGAGCGTCGCGTCTACCAGGCCCT
GACCCGTCAGGGACGAACAGTCAGCGACCTCGCCGAAGAGCTCGGGCTGTCCGCTCCGAACATCCGCAAGGCCCTGCGAA
ACCTGCGCGGCCGCGGGCTGATCCTTCAACTCGGCGGCAGAGGCAGGGCCACCACCTACCAGCGGACGGACTCATAG

Upstream 100 bases:

>100_bases
CATGTTCTCCGATCTTGGGGCGCGAGCCACAACCGCCAAATGTAACCGCCACACGCCAAATGTAACTCCGTCGTGGTTAC
ATTTGGGTGTGCCACGTGAC

Downstream 100 bases:

>100_bases
CCGATCGATCCTTACCCGCCAACCACTACACGCCCTGGACCATGCCTGGCCCATCCCCATGTTCCACCCGGCCAGATGAC
GCCGAGTCCACCGCGCGAGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>478_residues
MSQTIAFLRAAGGDTTEVEVKSAAGGLPASLTSTLSALANQPGGGTIILGLDERAGFRPVELSDPQVLKQGLAARARAFT
PPVRLTIEDGEVDGAAVVVAQVQECDRSTKPCRVTATGRAYLRGYDGDYALSDVEEQGFLAARQPPLFDRSPVEDATIDE
LDTELVDAFLLAVRERDPAGLGRFPDDTELLRRAGVTMDGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTGSAATRA
RNQVTISGPVPRMLDAALLWARHTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRDLDHWSAGLAVEVRLLRDRLV
VTNPGGLYGITVDRLGRDAVTSARNASLVAICQHVRSAQTGARVIEALASGIPTVTEALADCGLPSAHYVDSGIRFTVIL
HQFATATPVATAEPPLGATERRVYQALTRQGRTVSDLAEELGLSAPNIRKALRNLRGRGLILQLGGRGRATTYQRTDS

Sequences:
NA

Specific function: NA

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA