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The map label for this gene is olpB [H]

Identifier: 86610349

GI number: 86610349

Start: 3029343

End: 3031082

Strand: Direct

Name: olpB [H]

Synonym: CYB_2929

Alternate gene names: 86610349

Gene position: 3029343-3031082 (Clockwise)

Preceding gene: 86610348

Following gene: 86610350

Centisome position: 99.43

GC content: 62.07

Gene sequence:

>1740_bases
ATGCGTGAGCTTTCCCTTTGGCAGGGCTGGAAAACTGCGGCTTTGGTGATCAGTTGCAGCAGCTTGGCCTGGCTTGGGGA
TCCCGCTTGGGCCCAACTTTCTGATATCAGCACCTATTGGGGTGCCCAGTACATTGCCGGGTTGAATGAACGGCAGATCA
TCGGCGGCTTCCCGGATGGCACCTTTCGTCCCAATGAATCCATCACCCGTGCCCAATTTGCCGTTATTGTCACCAAGGCT
TTTGGCCTAGATACCAACGTTCCTGTGCGCTCCTTTGCCGATCCCATTCCCAGTTGGGCGGCTCCCTCCATCGGCGCGGC
GGCAGCGGCAGGGTTTGTTTCCGGCTTTCCGGACGGCACCTTTCGCCCCAACGATGTGCTCACCCGTGCGCAGGCCATCA
CTGTCCTGACCCGTGCCGCCACCAACGGTAGGCTCATCGAAGATGCCGGCCAAATTGACGCGATCCTATCCGCGTTCGGC
GATGCCAATTTGGTTCCCAACTTTGCCCGCGCCCCCATCGCGACAGCGGTTCAGAAAGGGCTGTTGGTGCTCTACCCCAA
CCCCACTCAATTGAATGCCCAGGCGGTGGCCACGCGGGGGGAAGTGGCTGCTCTTACCTACCAAGCGCTGGCCAAGGTGG
GTCGAGTACCCAATTTGGATCCGCCGGTGGGGGCTGCCATTCCCGGCCCTGGGATCCGCACCGAGCTCCTTGCCCAGGTC
ACCCCTACGCCCGAACCCCTGACCACGCCAGACATTCCCATTGAGCCTCTGGTAGAAACGCTGCCCGCCGCCCCAGAAGT
GAGAACCTTCTTTGCCCGCGAAGAGCTGGGATCCGTAAACCCAGGGGATACCGTTACCGTGTTTTTGCTGGGATCCCCAG
GGGCGCAGGGATCGTTTTCCATCCCCGGCATTGCCTACAACCTGCCACTGCAGGAAACCCGCCCAGGGCAATACGAGGGC
AGCTACACCTTCCGCAGCCAAGACCGGGCCTCAGAAGCGCCTGTTTTTGCCCGCTTGGAGCGGGATGGACTGGTAACCCT
GGTGCAGCTGCCGGATAAGACCATCACCATCGGGCGGGTTACCGACACCACCTTCCCCACCATCAGCGAACTGGCCCCTC
CCAACGGATCCCTAACCGACAACTCTCGCCCCTCCATCTCAGCCCGTTTCCAAGATGACCAAGGAATTGACCTGAATAGC
TTTACCTTGCTGGTGAACAACGCGGATGTCACCGCCCAAGCCCAGCTCACCCGCACCGGCTTCGCCTACACCCCAGCCGA
GCCGCTGCCCACCGATCGACCGACCTTGATCGCCGTCCAAATTGCCGATACCAGCGGCAACACCACCATCCAGCAGTGGT
CTTTCCAGGTGCAGGCCGCCCAGCCCACTCCCACACCAACTCCAACACCCGCACCAACCCCAACCCCAACACCGACAGCA
ACACCCACTCCCACGCTGACTTCAACACCAACCCCGACACCTACGCCCGCCCCAACACTCACCCCCACGCCACCCACACC
GACCCCCACGCCGGAAGCTACACCCACTCCCACTCCCCAGCCTAGCGGGGAGCCTTCACCTTCACCTTCTCCAGAAGGAC
GGTCTCCTGCAGAACCCAAGCCGGAGTCCAGCCCCGAGGCTCAGGAGAGTGAGGCTACAGAGTCTCCTAAGCCAGAATCC
CCAGCCCCCCAGCCAGGGGATCCCGGCGGACCGACTCCTTCTCCTTCCCCCAGCCCCTAG

Upstream 100 bases:

>100_bases
CTCTCCTACACTTCTGTCCGGCCAACTTCCAGGGCCCCTCCCAACCGAGAGTGGGGATCCAAGACTGTAAATCCCGTACC
CAGAACCTGAGGTGTGAACG

Downstream 100 bases:

>100_bases
GGAAAACTCGATCCAGACCCCGAACAGGCTCAATAGTGTTTTAAGAGCTTCCGATCCCTTAATACCTACTAAATCTAGTG
GGCACAAGCGGGGCAGGATG

Product: S-layer protein

Products: NA

Alternate protein names: Outer layer protein B; S-layer protein 1 [H]

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MRELSLWQGWKTAALVISCSSLAWLGDPAWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKA
FGLDTNVPVRSFADPIPSWAAPSIGAAAAAGFVSGFPDGTFRPNDVLTRAQAITVLTRAATNGRLIEDAGQIDAILSAFG
DANLVPNFARAPIATAVQKGLLVLYPNPTQLNAQAVATRGEVAALTYQALAKVGRVPNLDPPVGAAIPGPGIRTELLAQV
TPTPEPLTTPDIPIEPLVETLPAAPEVRTFFAREELGSVNPGDTVTVFLLGSPGAQGSFSIPGIAYNLPLQETRPGQYEG
SYTFRSQDRASEAPVFARLERDGLVTLVQLPDKTITIGRVTDTTFPTISELAPPNGSLTDNSRPSISARFQDDQGIDLNS
FTLLVNNADVTAQAQLTRTGFAYTPAEPLPTDRPTLIAVQIADTSGNTTIQQWSFQVQAAQPTPTPTPTPAPTPTPTPTA
TPTPTLTSTPTPTPTPAPTLTPTPPTPTPTPEATPTPTPQPSGEPSPSPSPEGRSPAEPKPESSPEAQESEATESPKPES
PAPQPGDPGGPTPSPSPSP

Sequences:

>Translated_579_residues
MRELSLWQGWKTAALVISCSSLAWLGDPAWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKA
FGLDTNVPVRSFADPIPSWAAPSIGAAAAAGFVSGFPDGTFRPNDVLTRAQAITVLTRAATNGRLIEDAGQIDAILSAFG
DANLVPNFARAPIATAVQKGLLVLYPNPTQLNAQAVATRGEVAALTYQALAKVGRVPNLDPPVGAAIPGPGIRTELLAQV
TPTPEPLTTPDIPIEPLVETLPAAPEVRTFFAREELGSVNPGDTVTVFLLGSPGAQGSFSIPGIAYNLPLQETRPGQYEG
SYTFRSQDRASEAPVFARLERDGLVTLVQLPDKTITIGRVTDTTFPTISELAPPNGSLTDNSRPSISARFQDDQGIDLNS
FTLLVNNADVTAQAQLTRTGFAYTPAEPLPTDRPTLIAVQIADTSGNTTIQQWSFQVQAAQPTPTPTPTPAPTPTPTPTA
TPTPTLTSTPTPTPTPAPTLTPTPPTPTPTPEATPTPTPQPSGEPSPSPSPEGRSPAEPKPESSPEAQESEATESPKPES
PAPQPGDPGGPTPSPSPSP
>Mature_579_residues
MRELSLWQGWKTAALVISCSSLAWLGDPAWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKA
FGLDTNVPVRSFADPIPSWAAPSIGAAAAAGFVSGFPDGTFRPNDVLTRAQAITVLTRAATNGRLIEDAGQIDAILSAFG
DANLVPNFARAPIATAVQKGLLVLYPNPTQLNAQAVATRGEVAALTYQALAKVGRVPNLDPPVGAAIPGPGIRTELLAQV
TPTPEPLTTPDIPIEPLVETLPAAPEVRTFFAREELGSVNPGDTVTVFLLGSPGAQGSFSIPGIAYNLPLQETRPGQYEG
SYTFRSQDRASEAPVFARLERDGLVTLVQLPDKTITIGRVTDTTFPTISELAPPNGSLTDNSRPSISARFQDDQGIDLNS
FTLLVNNADVTAQAQLTRTGFAYTPAEPLPTDRPTLIAVQIADTSGNTTIQQWSFQVQAAQPTPTPTPTPAPTPTPTPTA
TPTPTLTSTPTPTPTPAPTLTPTPPTPTPTPEATPTPTPQPSGEPSPSPSPEGRSPAEPKPESSPEAQESEATESPKPES
PAPQPGDPGGPTPSPSPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR002102
- InterPro:   IPR018452
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 60567; Mature: 60567

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS01072 SLH_DOMAIN ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELSLWQGWKTAALVISCSSLAWLGDPAWAQLSDISTYWGAQYIAGLNERQIIGGFPDG
CCCCCCCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
TFRPNESITRAQFAVIVTKAFGLDTNVPVRSFADPIPSWAAPSIGAAAAAGFVSGFPDGT
CCCCCCCHHHHEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
FRPNDVLTRAQAITVLTRAATNGRLIEDAGQIDAILSAFGDANLVPNFARAPIATAVQKG
CCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHCC
LLVLYPNPTQLNAQAVATRGEVAALTYQALAKVGRVPNLDPPVGAAIPGPGIRTELLAQV
EEEEECCCCCCCHHHECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC
TPTPEPLTTPDIPIEPLVETLPAAPEVRTFFAREELGSVNPGDTVTVFLLGSPGAQGSFS
CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCC
IPGIAYNLPLQETRPGQYEGSYTFRSQDRASEAPVFARLERDGLVTLVQLPDKTITIGRV
CCCEEEECCHHCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEE
TDTTFPTISELAPPNGSLTDNSRPSISARFQDDQGIDLNSFTLLVNNADVTAQAQLTRTG
CCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECC
FAYTPAEPLPTDRPTLIAVQIADTSGNTTIQQWSFQVQAAQPTPTPTPTPAPTPTPTPTA
CEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
TPTPTLTSTPTPTPTPAPTLTPTPPTPTPTPEATPTPTPQPSGEPSPSPSPEGRSPAEPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PESSPEAQESEATESPKPESPAPQPGDPGGPTPSPSPSP
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRELSLWQGWKTAALVISCSSLAWLGDPAWAQLSDISTYWGAQYIAGLNERQIIGGFPDG
CCCCCCCCCCCEEEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
TFRPNESITRAQFAVIVTKAFGLDTNVPVRSFADPIPSWAAPSIGAAAAAGFVSGFPDGT
CCCCCCCHHHHEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCC
FRPNDVLTRAQAITVLTRAATNGRLIEDAGQIDAILSAFGDANLVPNFARAPIATAVQKG
CCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHCC
LLVLYPNPTQLNAQAVATRGEVAALTYQALAKVGRVPNLDPPVGAAIPGPGIRTELLAQV
EEEEECCCCCCCHHHECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC
TPTPEPLTTPDIPIEPLVETLPAAPEVRTFFAREELGSVNPGDTVTVFLLGSPGAQGSFS
CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCC
IPGIAYNLPLQETRPGQYEGSYTFRSQDRASEAPVFARLERDGLVTLVQLPDKTITIGRV
CCCEEEECCHHCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEE
TDTTFPTISELAPPNGSLTDNSRPSISARFQDDQGIDLNSFTLLVNNADVTAQAQLTRTG
CCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECC
FAYTPAEPLPTDRPTLIAVQIADTSGNTTIQQWSFQVQAAQPTPTPTPTPAPTPTPTPTA
CEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
TPTPTLTSTPTPTPTPAPTLTPTPPTPTPTPEATPTPTPQPSGEPSPSPSPEGRSPAEPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PESSPEAQESEATESPKPESPAPQPGDPGGPTPSPSPSP
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458832 [H]