| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is tas [H]
Identifier: 86610348
GI number: 86610348
Start: 3028128
End: 3029168
Strand: Direct
Name: tas [H]
Synonym: CYB_2928
Alternate gene names: 86610348
Gene position: 3028128-3029168 (Clockwise)
Preceding gene: 86610347
Following gene: 86610349
Centisome position: 99.39
GC content: 61.67
Gene sequence:
>1041_bases ATGCGCTACCGCCAGCTTGGCCACAGCCCTTTGCAAGTTTCCGAGATCTGCCTGGGCACCATGACCTTTGGGCAGCAGAA TACTTTGTCTGAGGCTTTCGAACAGCTCGACTACGCGGTGGAGCACGGGATCAACTTCATCGATACCGCCGAGATGTACC CGGTGCCGGCGCGGGCGGAAACCCAGGGATCCACCGAGCGCTACATCGGCGAGTGGCTACAACACCAACCGCGGCATCGC CTGATCCTGGCCACCAAGATCACCGGCCCTGGTCGGCCCTGGCATTGGATTCGCGGCGGATCCCTGTCCATCACCCGCGA CAACCTCAAGCAGGCGGTGGCCGATAGCCTCAAACGCCTGAAGACCGACTACATCGACCTCTACCAGATCCACTGGCCGG ATCGCTACGTGCCCCTGTTTGGGGGCGTTGCCTACGATCCCAGCCAGGAGCGGCCCACCGTTCCCATTGCCGAGCAGTTG CAGGCTCTGGCGGAATTGGTGCAAGAGGGTCTCATTCGCTACATCGGCCTGAGCAACGAAACCCCTTGGGGGGTGAGCAA GTTCTGCCAGGTGGCCGAGCAACTGGGGTTGCCCAAGGTGGTCTCGATTCAGAATGCCTACAGCCTCATCAACCGCACGT TTGAAATGGGCCTGGCGGAAGTCTGCCGCCACGAGCAGGTGGGCTTGCTGGCCTACAGCCCGCTCGGATTTGGGCTGCTG ACGGGCAAATATCTGGGGGGGGTGAAGCCGCCGGGATCCCGTTTGGCCTTGTTTGAAGGCTTTGGCCAGCGGTACCGCAA GCCCAATGTGGAAGAAGCGGTGGCTGCCTATGTGCAAATTGCCCGCCGGCACGGTCTGACACCGGCCCAGTTGGCTTTGG CCTTTGTGCGCAGCCGCTGGTTTGTCACCAGCACCATCATTGGGGCCACCAGCCTGACCCAACTCAAAGAGAACCTCAGT TGCCTGGATGTGGAGCTGTCCCCGCAGATCCTGGCGGAGATCGAAGCGGTTCACCAGCGCTACCCCAATCCTGCCCCCTG A
Upstream 100 bases:
>100_bases GAAATAGGAACGGGGGCATAGCGGGGGATCCCGTAGGCCGACAGGTTTTGGGCACAATGGGGACTGGCGCGCTGTCTAGG GTTGGAGACGGAGATTCCCC
Downstream 100 bases:
>100_bases AAGGTTGGCGAAACCGGTGGCCAGACAGAACTTTTCAGAAGGTTTCCTCGTCTGGGTGTGCGGTTTGGATCATCCTCTCC TACACTTCTGTCCGGCCAAC
Product: aldo/keto reductase Tas
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRYRQLGHSPLQVSEICLGTMTFGQQNTLSEAFEQLDYAVEHGINFIDTAEMYPVPARAETQGSTERYIGEWLQHQPRHR LILATKITGPGRPWHWIRGGSLSITRDNLKQAVADSLKRLKTDYIDLYQIHWPDRYVPLFGGVAYDPSQERPTVPIAEQL QALAELVQEGLIRYIGLSNETPWGVSKFCQVAEQLGLPKVVSIQNAYSLINRTFEMGLAEVCRHEQVGLLAYSPLGFGLL TGKYLGGVKPPGSRLALFEGFGQRYRKPNVEEAVAAYVQIARRHGLTPAQLALAFVRSRWFVTSTIIGATSLTQLKENLS CLDVELSPQILAEIEAVHQRYPNPAP
Sequences:
>Translated_346_residues MRYRQLGHSPLQVSEICLGTMTFGQQNTLSEAFEQLDYAVEHGINFIDTAEMYPVPARAETQGSTERYIGEWLQHQPRHR LILATKITGPGRPWHWIRGGSLSITRDNLKQAVADSLKRLKTDYIDLYQIHWPDRYVPLFGGVAYDPSQERPTVPIAEQL QALAELVQEGLIRYIGLSNETPWGVSKFCQVAEQLGLPKVVSIQNAYSLINRTFEMGLAEVCRHEQVGLLAYSPLGFGLL TGKYLGGVKPPGSRLALFEGFGQRYRKPNVEEAVAAYVQIARRHGLTPAQLALAFVRSRWFVTSTIIGATSLTQLKENLS CLDVELSPQILAEIEAVHQRYPNPAP >Mature_346_residues MRYRQLGHSPLQVSEICLGTMTFGQQNTLSEAFEQLDYAVEHGINFIDTAEMYPVPARAETQGSTERYIGEWLQHQPRHR LILATKITGPGRPWHWIRGGSLSITRDNLKQAVADSLKRLKTDYIDLYQIHWPDRYVPLFGGVAYDPSQERPTVPIAEQL QALAELVQEGLIRYIGLSNETPWGVSKFCQVAEQLGLPKVVSIQNAYSLINRTFEMGLAEVCRHEQVGLLAYSPLGFGLL TGKYLGGVKPPGSRLALFEGFGQRYRKPNVEEAVAAYVQIARRHGLTPAQLALAFVRSRWFVTSTIIGATSLTQLKENLS CLDVELSPQILAEIEAVHQRYPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=354, Percent_Identity=30.5084745762712, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI4504825, Length=352, Percent_Identity=30.3977272727273, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI27436971, Length=358, Percent_Identity=31.0055865921788, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI27436964, Length=355, Percent_Identity=28.7323943661972, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI27436962, Length=355, Percent_Identity=28.7323943661972, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI27436966, Length=355, Percent_Identity=28.4507042253521, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI41327764, Length=350, Percent_Identity=27.7142857142857, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI41152114, Length=257, Percent_Identity=29.5719844357977, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI223718702, Length=344, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=55.6195965417867, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI87081735, Length=356, Percent_Identity=31.4606741573034, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1788070, Length=344, Percent_Identity=30.2325581395349, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1789375, Length=346, Percent_Identity=30.9248554913295, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788081, Length=309, Percent_Identity=28.8025889967638, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787674, Length=335, Percent_Identity=25.3731343283582, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786400, Length=320, Percent_Identity=26.875, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212645785, Length=344, Percent_Identity=24.7093023255814, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319958, Length=314, Percent_Identity=28.6624203821656, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6323998, Length=338, Percent_Identity=28.9940828402367, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6319951, Length=343, Percent_Identity=26.8221574344023, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6322615, Length=266, Percent_Identity=26.3157894736842, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6325169, Length=353, Percent_Identity=24.0793201133144, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321052, Length=146, Percent_Identity=34.9315068493151, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646159, Length=235, Percent_Identity=29.7872340425532, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646155, Length=335, Percent_Identity=26.5671641791045, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38755; Mature: 38755
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRQLGHSPLQVSEICLGTMTFGQQNTLSEAFEQLDYAVEHGINFIDTAEMYPVPARAE CCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC TQGSTERYIGEWLQHQPRHRLILATKITGPGRPWHWIRGGSLSITRDNLKQAVADSLKRL CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHH KTDYIDLYQIHWPDRYVPLFGGVAYDPSQERPTVPIAEQLQALAELVQEGLIRYIGLSNE HHHHHEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TPWGVSKFCQVAEQLGLPKVVSIQNAYSLINRTFEMGLAEVCRHEQVGLLAYSPLGFGLL CCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH TGKYLGGVKPPGSRLALFEGFGQRYRKPNVEEAVAAYVQIARRHGLTPAQLALAFVRSRW HHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FVTSTIIGATSLTQLKENLSCLDVELSPQILAEIEAVHQRYPNPAP HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRYRQLGHSPLQVSEICLGTMTFGQQNTLSEAFEQLDYAVEHGINFIDTAEMYPVPARAE CCCHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC TQGSTERYIGEWLQHQPRHRLILATKITGPGRPWHWIRGGSLSITRDNLKQAVADSLKRL CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHH KTDYIDLYQIHWPDRYVPLFGGVAYDPSQERPTVPIAEQLQALAELVQEGLIRYIGLSNE HHHHHEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC TPWGVSKFCQVAEQLGLPKVVSIQNAYSLINRTFEMGLAEVCRHEQVGLLAYSPLGFGLL CCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH TGKYLGGVKPPGSRLALFEGFGQRYRKPNVEEAVAAYVQIARRHGLTPAQLALAFVRSRW HHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FVTSTIIGATSLTQLKENLSCLDVELSPQILAEIEAVHQRYPNPAP HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]