| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is paaY [C]
Identifier: 86610284
GI number: 86610284
Start: 2961046
End: 2961606
Strand: Direct
Name: paaY [C]
Synonym: CYB_2863
Alternate gene names: 86610284
Gene position: 2961046-2961606 (Clockwise)
Preceding gene: 86610283
Following gene: 86610289
Centisome position: 97.19
GC content: 62.03
Gene sequence:
>561_bases ATGCAACGAGAAAAACAGGACACCTGGCCAATTGGGCTGGATCGGCAGCCGACGGGAGTAGATGAGGCAGCCTTTATTGC CGCCAATGCCATACTGATCGGCGATGTCCATCTTTCGGAAGCGGTGAGCATCTGGTACGGGGCTATCCTGCGCGGGGATC TCTCGCCCATTGTGATTGGCCGCCGCAGCAACATCCAAGATGGAGCCATCCTGCACGGGGATCCCGGACAGCCGACCCTG GTTGGCGAGGAAGTGACCGTAGGCCATCGAGCGGTCATCCACAGTGCCCACATCGAGGGGGGATGTCTGATCGGGATTGG GGCCATTATCTTGAACGGGGTCACCATCGGGGCAGGCAGCATGGTGGGAGCTGGAGCGGTGGTCACCCGGTCTGTGCCAC CCCACTCTTTGGCGGCGGGGATCCCGGCCAAGGTTATCCGCACCCTCACCGAGGAAGAGGTCAAGCAACTGCGCCTTCAC GCCCAGCACTACGTGGATTTGGCGCTTCAGCATGCCAGCCGCTTTGGCCGGTGGAGCAGAGGTTCGGGCGAGCGGCTCTG A
Upstream 100 bases:
>100_bases ATCTACGAAACTTTCTTTGCCACTCGCCCCTTGCAACCGTCTGAATCCTCTCTACTCTCTCAACGTCAAGCCCAACTGAC ATGAACGGCCTCGACTCTGA
Downstream 100 bases:
>100_bases ACCTATTTTGCAAGCCGTCTCTCAACAGCCGGGATCCGCGCAGAGCACCCAGGTATCTTTGCTGCCGCCCCCCTGGGAGG AGTTCACCACCAGAGATCCC
Product: hexapaptide repeat-containing transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIGRRSNIQDGAILHGDPGQPTL VGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGSMVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLH AQHYVDLALQHASRFGRWSRGSGERL
Sequences:
>Translated_186_residues MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIGRRSNIQDGAILHGDPGQPTL VGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGSMVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLH AQHYVDLALQHASRFGRWSRGSGERL >Mature_186_residues MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIGRRSNIQDGAILHGDPGQPTL VGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGSMVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLH AQHYVDLALQHASRFGRWSRGSGERL
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1787667, Length=137, Percent_Identity=42.3357664233577, Blast_Score=106, Evalue=8e-25, Organism=Escherichia coli, GI87082240, Length=153, Percent_Identity=38.562091503268, Blast_Score=105, Evalue=1e-24, Organism=Escherichia coli, GI87081681, Length=150, Percent_Identity=36, Blast_Score=91, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: NA
Molecular weight: Translated: 19673; Mature: 19673
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIG CCCCCCCCCCCCCCCCCCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEE RRSNIQDGAILHGDPGQPTLVGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGS CCCCCCCCCEEECCCCCCCEECCEECCCHHHEEEECCCCCCCCEEHHHHHHCCEEECCCC MVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLHAQHYVDLALQHASRFGRWSR CCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GSGERL CCCCCC >Mature Secondary Structure MQREKQDTWPIGLDRQPTGVDEAAFIAANAILIGDVHLSEAVSIWYGAILRGDLSPIVIG CCCCCCCCCCCCCCCCCCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEE RRSNIQDGAILHGDPGQPTLVGEEVTVGHRAVIHSAHIEGGCLIGIGAIILNGVTIGAGS CCCCCCCCCEEECCCCCCCEECCEECCCHHHEEEECCCCCCCCEEHHHHHHCCEEECCCC MVGAGAVVTRSVPPHSLAAGIPAKVIRTLTEEEVKQLRLHAQHYVDLALQHASRFGRWSR CCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GSGERL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]