| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610282
Identifier: 86610282
GI number: 86610282
Start: 2958121
End: 2960031
Strand: Direct
Name: 86610282
Synonym: CYB_2861
Alternate gene names: NA
Gene position: 2958121-2960031 (Clockwise)
Preceding gene: 86610281
Following gene: 86610283
Centisome position: 97.09
GC content: 60.02
Gene sequence:
>1911_bases ATGCTGAAAGCTTTGCAACAACCAGAGAGGGGTGTTGGGCTAGGGTTGTTGGTGGGCATTGGGGTGCTGCTCTGGCCCAT GCTGCGCCAGGGCTATCCCATGACTCACTCCACTCACTTCAACCTCAGTTGGGCCTTTCAGTATCAACGACAGTTTTTCG GCGGGCAGTTTTACCCCCGCTGGCTGGAGTATTCCAACTTCGGCTACGGCAATCCCACCTTTGCCTTTTACCCCCCTCTG TGCATGGTGGCCCCTCTGCCGTTTCGCCTGCTGGAGCTGGACATGCCCACCTCTTTGGTGGCCAGCATGGGCTTGGCGAT GGCAGTCTTTGGCGCAGGGCTGTATGCCCTTCTCCGGCAACTCATCCCCTGGGCTTGGGCTCTGGTTTTGGCTCTGGCGG GTATGGCCGGCCCCTATTGGCTGGTGGATATTTACCAACGGGGGGCAATGGGGGAAGTGTGGGCCATTGCTGTCTCTCCC TGGATTTTCTGGGCCTCAGTCCAGGTGATCTGCCGGCCCCAGTCCCTTTGGCCGATTGTGGCCTTAGCCATTAGCTACGG CCTGTTGGCCCTATCTCACTTGCCCACTTTGCTGGTCTTTACGCTAACTTGGCTGCCCCTGCTGTGGGTGCTGAGCCGTC GGGATCCCCTCTGGCCCAGGGTGGGGCGCTGCTACTTGGGGTTTGGGCTGGGGCTGGGGTGGACGGCGTTTTATCTGCTG CCAGCCTTTTGGGATCAGCGCCTCATCCAGGTGGAGTTGGTGAATTTTGTCGAAGAGTACATGCCCCAACATCGCCTGAT GCTGAGTGGGCTAACCCGGCTCCAGCCGCAACTGACGCAGCACTGGTTTGAAAGCGGCCTGGTGGGGTACTGGATCTGGA TGGTGGCCGTTGTCTTGGGTGCTGGGATCCTGGTTTTCTGGGAATGGCTGGCCCGCAGGACAAGGGGGATGACCCCGATC CATTCCGTTCGTGCTGGCGAGACGGAGTCCTTTGATGCCTTGGGATCCCATGCTCCCCTGGCCAAAGCCATCCTGCTCTA CAGCTTGGGGGCCAGCTTGGTGGCCTTGCTGATGATGACGGATCTGCTGGGTTGGCTCTACGAGTGGGTTTTGCCCCTGC GCCGCATTCAGTTTTCTTGGCGCTGGATGGCGGTGACATCAGTAACGGTGCCCTGGCTGTTGGGATCCCTGGCCGCCTGG GGGTGGGGGCAAAAGGGCTGGAGGATCCTCTTGATTGTGGGGATAGGTCTGGCAATGGGGATACAAAGCTGGCAGGGCTG GCAGGTCTTGTCCAGAGCCTGGTTTGACCCGCAAACCATCCAGACTTTTCAAGAGCTGTCTGCCGCCAAGCCATTTCCCA ACGAGCCCCAGGAGCGACCGGGCATTGCTTTTCTCCACATGCACTGGCGCTTTCCCGACGGGCTGGCGCTGGTGGATGTG CTGGAGTACCGACCTCGCCAGGCAACGCTGCCCATGCCGCCCCCAGAGGTGGATCCGCTGCTGCGGTGGCAAGGCGACAT GGTGAACTTTGGACGAGAACAAAGCGATCTGGAGCCACTGTTGGAAGTGGAGCAGTGGCGCTATGGCTACCGTCGTTTTC GGGCCGTTAACCCCACCGATCAGGATCAATGGGTAGTCCTGCGCACTTTTTACTACCCTGCTTGGTGGGTACAGGTGGAT GGTCGCCTCACGTCTGCTGAGCACAGCGGAGTGGGGCTGTTGCAGGTGCGGATCCCACCGGGGGATCATCGCGTGCAGGT GCGCTATCTGGGTACTGCAGCCGAGTGGATGGGGTGGATCTTGACCGGCCTGACGGGGGTGCTGCTGGTGAAGCTGCGGC GGCTGCTTCGTTTATTGAATTTGAACGGAGCGCGGAGACAAGAAACTCCAGAGGAGGTAACAGCATGCTGA
Upstream 100 bases:
>100_bases CCTTGGAGAAGACGATGGTGATCGAACACATCCGGCTGCTGCGCAAGTATGGGGGGAAGTCTGGGCCTTTCGAGGCAGAG GATCGGGATAACGCCGAGAA
Downstream 100 bases:
>100_bases GTCGCGTGGCCGATTCCATCTACTGGCTCAACCGCTACGTGGAGCGCGCCGAGAACATCGCCCGCTTCATCGATGTCAAT CTCAACCTCATCCTAGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MLKALQQPERGVGLGLLVGIGVLLWPMLRQGYPMTHSTHFNLSWAFQYQRQFFGGQFYPRWLEYSNFGYGNPTFAFYPPL CMVAPLPFRLLELDMPTSLVASMGLAMAVFGAGLYALLRQLIPWAWALVLALAGMAGPYWLVDIYQRGAMGEVWAIAVSP WIFWASVQVICRPQSLWPIVALAISYGLLALSHLPTLLVFTLTWLPLLWVLSRRDPLWPRVGRCYLGFGLGLGWTAFYLL PAFWDQRLIQVELVNFVEEYMPQHRLMLSGLTRLQPQLTQHWFESGLVGYWIWMVAVVLGAGILVFWEWLARRTRGMTPI HSVRAGETESFDALGSHAPLAKAILLYSLGASLVALLMMTDLLGWLYEWVLPLRRIQFSWRWMAVTSVTVPWLLGSLAAW GWGQKGWRILLIVGIGLAMGIQSWQGWQVLSRAWFDPQTIQTFQELSAAKPFPNEPQERPGIAFLHMHWRFPDGLALVDV LEYRPRQATLPMPPPEVDPLLRWQGDMVNFGREQSDLEPLLEVEQWRYGYRRFRAVNPTDQDQWVVLRTFYYPAWWVQVD GRLTSAEHSGVGLLQVRIPPGDHRVQVRYLGTAAEWMGWILTGLTGVLLVKLRRLLRLLNLNGARRQETPEEVTAC
Sequences:
>Translated_636_residues MLKALQQPERGVGLGLLVGIGVLLWPMLRQGYPMTHSTHFNLSWAFQYQRQFFGGQFYPRWLEYSNFGYGNPTFAFYPPL CMVAPLPFRLLELDMPTSLVASMGLAMAVFGAGLYALLRQLIPWAWALVLALAGMAGPYWLVDIYQRGAMGEVWAIAVSP WIFWASVQVICRPQSLWPIVALAISYGLLALSHLPTLLVFTLTWLPLLWVLSRRDPLWPRVGRCYLGFGLGLGWTAFYLL PAFWDQRLIQVELVNFVEEYMPQHRLMLSGLTRLQPQLTQHWFESGLVGYWIWMVAVVLGAGILVFWEWLARRTRGMTPI HSVRAGETESFDALGSHAPLAKAILLYSLGASLVALLMMTDLLGWLYEWVLPLRRIQFSWRWMAVTSVTVPWLLGSLAAW GWGQKGWRILLIVGIGLAMGIQSWQGWQVLSRAWFDPQTIQTFQELSAAKPFPNEPQERPGIAFLHMHWRFPDGLALVDV LEYRPRQATLPMPPPEVDPLLRWQGDMVNFGREQSDLEPLLEVEQWRYGYRRFRAVNPTDQDQWVVLRTFYYPAWWVQVD GRLTSAEHSGVGLLQVRIPPGDHRVQVRYLGTAAEWMGWILTGLTGVLLVKLRRLLRLLNLNGARRQETPEEVTAC >Mature_636_residues MLKALQQPERGVGLGLLVGIGVLLWPMLRQGYPMTHSTHFNLSWAFQYQRQFFGGQFYPRWLEYSNFGYGNPTFAFYPPL CMVAPLPFRLLELDMPTSLVASMGLAMAVFGAGLYALLRQLIPWAWALVLALAGMAGPYWLVDIYQRGAMGEVWAIAVSP WIFWASVQVICRPQSLWPIVALAISYGLLALSHLPTLLVFTLTWLPLLWVLSRRDPLWPRVGRCYLGFGLGLGWTAFYLL PAFWDQRLIQVELVNFVEEYMPQHRLMLSGLTRLQPQLTQHWFESGLVGYWIWMVAVVLGAGILVFWEWLARRTRGMTPI HSVRAGETESFDALGSHAPLAKAILLYSLGASLVALLMMTDLLGWLYEWVLPLRRIQFSWRWMAVTSVTVPWLLGSLAAW GWGQKGWRILLIVGIGLAMGIQSWQGWQVLSRAWFDPQTIQTFQELSAAKPFPNEPQERPGIAFLHMHWRFPDGLALVDV LEYRPRQATLPMPPPEVDPLLRWQGDMVNFGREQSDLEPLLEVEQWRYGYRRFRAVNPTDQDQWVVLRTFYYPAWWVQVD GRLTSAEHSGVGLLQVRIPPGDHRVQVRYLGTAAEWMGWILTGLTGVLLVKLRRLLRLLNLNGARRQETPEEVTAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72841; Mature: 72841
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKALQQPERGVGLGLLVGIGVLLWPMLRQGYPMTHSTHFNLSWAFQYQRQFFGGQFYPR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHH WLEYSNFGYGNPTFAFYPPLCMVAPLPFRLLELDMPTSLVASMGLAMAVFGAGLYALLRQ HHCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LIPWAWALVLALAGMAGPYWLVDIYQRGAMGEVWAIAVSPWIFWASVQVICRPQSLWPIV HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHEECCCHHHHHH ALAISYGLLALSHLPTLLVFTLTWLPLLWVLSRRDPLWPRVGRCYLGFGLGLGWTAFYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHCCCHHHHHHHHH PAFWDQRLIQVELVNFVEEYMPQHRLMLSGLTRLQPQLTQHWFESGLVGYWIWMVAVVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AGILVFWEWLARRTRGMTPIHSVRAGETESFDALGSHAPLAKAILLYSLGASLVALLMMT CHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DLLGWLYEWVLPLRRIQFSWRWMAVTSVTVPWLLGSLAAWGWGQKGWRILLIVGIGLAMG HHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHH IQSWQGWQVLSRAWFDPQTIQTFQELSAAKPFPNEPQERPGIAFLHMHWRFPDGLALVDV CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHH LEYRPRQATLPMPPPEVDPLLRWQGDMVNFGREQSDLEPLLEVEQWRYGYRRFRAVNPTD HHCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC QDQWVVLRTFYYPAWWVQVDGRLTSAEHSGVGLLQVRIPPGDHRVQVRYLGTAAEWMGWI CCCEEEEEEEECCEEEEEECCEEECCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHH LTGLTGVLLVKLRRLLRLLNLNGARRQETPEEVTAC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC >Mature Secondary Structure MLKALQQPERGVGLGLLVGIGVLLWPMLRQGYPMTHSTHFNLSWAFQYQRQFFGGQFYPR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHH WLEYSNFGYGNPTFAFYPPLCMVAPLPFRLLELDMPTSLVASMGLAMAVFGAGLYALLRQ HHCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LIPWAWALVLALAGMAGPYWLVDIYQRGAMGEVWAIAVSPWIFWASVQVICRPQSLWPIV HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHEECCCHHHHHH ALAISYGLLALSHLPTLLVFTLTWLPLLWVLSRRDPLWPRVGRCYLGFGLGLGWTAFYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHCCCHHHHHHHHH PAFWDQRLIQVELVNFVEEYMPQHRLMLSGLTRLQPQLTQHWFESGLVGYWIWMVAVVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AGILVFWEWLARRTRGMTPIHSVRAGETESFDALGSHAPLAKAILLYSLGASLVALLMMT CHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DLLGWLYEWVLPLRRIQFSWRWMAVTSVTVPWLLGSLAAWGWGQKGWRILLIVGIGLAMG HHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHH IQSWQGWQVLSRAWFDPQTIQTFQELSAAKPFPNEPQERPGIAFLHMHWRFPDGLALVDV CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHH LEYRPRQATLPMPPPEVDPLLRWQGDMVNFGREQSDLEPLLEVEQWRYGYRRFRAVNPTD HHCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC QDQWVVLRTFYYPAWWVQVDGRLTSAEHSGVGLLQVRIPPGDHRVQVRYLGTAAEWMGWI CCCEEEEEEEECCEEEEEECCEEECCCCCCCEEEEEEECCCCCEEEEEEECCHHHHHHHH LTGLTGVLLVKLRRLLRLLNLNGARRQETPEEVTAC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA