| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is glnH [H]
Identifier: 86610271
GI number: 86610271
Start: 2945585
End: 2946514
Strand: Direct
Name: glnH [H]
Synonym: CYB_2850
Alternate gene names: 86610271
Gene position: 2945585-2946514 (Clockwise)
Preceding gene: 86610270
Following gene: 86610276
Centisome position: 96.68
GC content: 62.37
Gene sequence:
>930_bases ATGGTCTCAAAAAAGCCAATATCCAGCTCAACCGCAAAATGTTGGCCCGCTTGGCTTTCCTGGATCCAGAGGCCTTTACC CAGGTGGTGGAGGCAGCGCGCCAGTCTCGCGCCTCCTGAGGAGGTTCCGACGGCTATCCAGAAGTCCTTCCTGGCAGCCA TTCTGGCCCTCGCCTGCCTGGGGAGAGGGATCCCTACTGTGGCTCGTCCTTGGCCGGAGATTGTGGATTCTGGACGGCTG CGCGTTGCCGTAAAAGACAACTTGAGGCCGCTGGGGTTTCGCACTCCCCAAGGGGATCTGCAGGGGTTTGAGATCGAGCT GGCTTGTGAGCTGGGATCCCGGCTGTTGGGCTCGGCAGAGGCTGTGGAGTTGGTGCCGGTCTCGAATGTAGAGCGGCTGC AGGTGCTGGCTGACGGCCAGGTGGATTTGGCCATTGCTCAGATCGGCATTACCCCGGATCGGGCGCGCCAGGTGGAGTTC ACTTCTGCTTACTATCAGGATGGCCCCAGCTTGGTTGTGGCTCGTTCCCACAACTGGGAAAGCTGGTCGGACTTGCGGGG CGGTCGCGTTGCAGTCTTGCGCGGTTCCAGCGCCATTCCCCTGCTGAATCGATACCTGCCAGGGGTGGAGTTGGTGCCTG TCGATTCCTACCGAGAAGGGGCGGAACTGCTCCTGAAAGGGGCGGTGCAGGGGTGGGCAGCAGATCGCTCGGTGCTGGCA GGGTGGCTAGCAGAGCATCCCCGTCGCGAAAGCGCTGCGGAGCAACAGTTTCAATTTCTGGGATCCCCCTTGGCAACGGT GGGGCTGGGCATTGCCATGCCCAAGGGGCTGCAGCACGCCGAATTGCGGCTGCGGGTGCGCCGAGAACTGGAGAATTTGC GGGCTGAGGGCTGGCTGGCAGAGCGGGCCAGAGCCTGGGGGTTGCCCTAA
Upstream 100 bases:
>100_bases CGGGATCGCCGCCGCAAGAAGCGGGATTTTCGTCGCCTATGGATTACCCGCATCAACGCGGCCACCCGTGCCCAGGGCCT GCGTTACCACGAGTTCATCG
Downstream 100 bases:
>100_bases AGTTGAGGATACTTGCTACTCTTTGTCTCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCG ATAGCATTCTGTTTGTTTCC
Product: amino acid transporter, periplasmic amino acid-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACLGRGIPTVARPWPEIVDSGRL RVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEF TSAYYQDGPSLVVARSHNWESWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLAERARAWGLP
Sequences:
>Translated_309_residues MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACLGRGIPTVARPWPEIVDSGRL RVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEF TSAYYQDGPSLVVARSHNWESWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLAERARAWGLP >Mature_309_residues MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACLGRGIPTVARPWPEIVDSGRL RVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAEAVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEF TSAYYQDGPSLVVARSHNWESWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLAERARAWGLP
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=234, Percent_Identity=26.0683760683761, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787085, Length=213, Percent_Identity=26.2910798122066, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 34032; Mature: 34032
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GRGIPTVARPWPEIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAE CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCC AVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEFTSAYYQDGPSLVVARSHNWE CEEEEECCCHHHEEEEECCCEEEEEEEECCCCCHHHEEEHHHHHHCCCCCEEEEECCCCC SWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA CHHHCCCCEEEEEECCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLA HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH ERARAWGLP HHHHHCCCC >Mature Secondary Structure MVSKKPISSSTAKCWPAWLSWIQRPLPRWWRQRASLAPPEEVPTAIQKSFLAAILALACL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GRGIPTVARPWPEIVDSGRLRVAVKDNLRPLGFRTPQGDLQGFEIELACELGSRLLGSAE CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCCC AVELVPVSNVERLQVLADGQVDLAIAQIGITPDRARQVEFTSAYYQDGPSLVVARSHNWE CEEEEECCCHHHEEEEECCCEEEEEEEECCCCCHHHEEEHHHHHHCCCCCEEEEECCCCC SWSDLRGGRVAVLRGSSAIPLLNRYLPGVELVPVDSYREGAELLLKGAVQGWAADRSVLA CHHHCCCCEEEEEECCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GWLAEHPRRESAAEQQFQFLGSPLATVGLGIAMPKGLQHAELRLRVRRELENLRAEGWLA HHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH ERARAWGLP HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]