| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610254
Identifier: 86610254
GI number: 86610254
Start: 2930228
End: 2930485
Strand: Direct
Name: 86610254
Synonym: CYB_2830
Alternate gene names: NA
Gene position: 2930228-2930485 (Clockwise)
Preceding gene: 86610253
Following gene: 86610255
Centisome position: 96.18
GC content: 58.14
Gene sequence:
>258_bases ATGGATCCCGTGAGCAACCCTTTGGTCAGTCTGTTGGATAAGCTGCGCGGCCTGTCGGTCTGGATCGAGATCACCACCGA GGACTGCACCTACTACTACGGCCCCTTCTCCGATGAAGCTGAGGCGGAGCGGCTCAAAGGCCACTACATTGCCGACCTGC AAAAGGAAGGAGCCAAAAAGATCCAGGCTCTGGTGAAGAAAATGCGCCAGCCACAGTCTCTGACGGTGACCCGTACTCCG TCGGGAGCCCGTTCCTGA
Upstream 100 bases:
>100_bases CCTGAGGTTGATACATTCCTCAACAAATCGTCAATAAAAGTAGTAGAATCTAGGGGATTGCAAAAGGACATCCAATGATT GCTAGACTTGATAATGGGGG
Downstream 100 bases:
>100_bases TGTCTGCTACGGCTTATCAAGTAACCCTTCATCACCGCGGCCAAACCTACCGCTTCCCTGCCTCTGCGGATCAGACGGTT TTACAAGCTGCTCTGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MDPVSNPLVSLLDKLRGLSVWIEITTEDCTYYYGPFSDEAEAERLKGHYIADLQKEGAKKIQALVKKMRQPQSLTVTRTP SGARS
Sequences:
>Translated_85_residues MDPVSNPLVSLLDKLRGLSVWIEITTEDCTYYYGPFSDEAEAERLKGHYIADLQKEGAKKIQALVKKMRQPQSLTVTRTP SGARS >Mature_85_residues MDPVSNPLVSLLDKLRGLSVWIEITTEDCTYYYGPFSDEAEAERLKGHYIADLQKEGAKKIQALVKKMRQPQSLTVTRTP SGARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9542; Mature: 9542
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVSNPLVSLLDKLRGLSVWIEITTEDCTYYYGPFSDEAEAERLKGHYIADLQKEGAKK CCCCCHHHHHHHHHHCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHH IQALVKKMRQPQSLTVTRTPSGARS HHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MDPVSNPLVSLLDKLRGLSVWIEITTEDCTYYYGPFSDEAEAERLKGHYIADLQKEGAKK CCCCCHHHHHHHHHHCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHH IQALVKKMRQPQSLTVTRTPSGARS HHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA