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The map label for this gene is psaJ [H]

Identifier: 86610249

GI number: 86610249

Start: 2927489

End: 2927608

Strand: Direct

Name: psaJ [H]

Synonym: CYB_2825

Alternate gene names: 86610249

Gene position: 2927489-2927608 (Clockwise)

Preceding gene: 86610248

Following gene: 86610250

Centisome position: 96.09

GC content: 45.83

Gene sequence:

>120_bases
ATGGCTGATTTCACCAAGTTTCTCACCACTGCTCCGGTGGCATTTATCCTGTTTTCCAGCTTTGTTTTTGCCCTGTTCAT
CGAGATCAATCGCTTCTTCCCCGACATTTTGACGTTCTGA

Upstream 100 bases:

>100_bases
TTGCCAGCGGCGAAATTCAAGAGCCGGAAGCGGCTGTGCCCATCTCGCCCCGCTGAGCCTGGCTTTCCAACTCGATCTGT
TCAACTTTTGAGAGGCATCT

Downstream 100 bases:

>100_bases
GTGTAGGCCAGGGATCCCCAGCGCAACCTACGCCCGGTGGGATCCCTGCTTTTTTTGAGCTTCTTTTCATACCCTTTTGA
ACCGGACACAGAGTTGCTGA

Product: photosystem I reaction center subunit IX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 38

Protein sequence:

>39_residues
MADFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF

Sequences:

>Translated_39_residues
MADFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF
>Mature_38_residues
ADFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF

Specific function: May help in the organization of the psaE and psaF subunits [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002615
- ProDom:   PD004198 [H]

Pfam domain/function: PF01701 PSI_PsaJ [H]

EC number: NA

Molecular weight: Translated: 4539; Mature: 4408

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA