| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610223
Identifier: 86610223
GI number: 86610223
Start: 2897501
End: 2898865
Strand: Direct
Name: 86610223
Synonym: CYB_2800
Alternate gene names: NA
Gene position: 2897501-2898865 (Clockwise)
Preceding gene: 86610221
Following gene: 86610226
Centisome position: 95.1
GC content: 61.03
Gene sequence:
>1365_bases ATGTTCCAAGATTGCAGCTCGCAGATCCGCTTTAACCCACCTGCCCTTTTCTACGGGGTTGCCGCTTGCGATTTGGATCG GGATGGGGCCTTTGAGCTGTTTGTGTGCGGGTTCCGCGGCTCCAATCGAGTCTTGAAGTGGGATGGGCAAACCTTGGTGG ATCAAGCAGACGACACCCTGGCCGATGCAGGGCGCATGGCAATTGGGGTGGCTGCCGCCGACTTTGACGGGGACGGGCAG GAAGAACTTTATGTCTTGAACACCGATACCTTCGGCGGGCGCAAGCGCTTTGGGGATCGCCTCTTCGACTGGCAGGGATC CGCCTGGGTGGACCTGTTCTCCCTGCCGCAAAACCAAGATGCCCTCAACTTGACGGCAGGTCGCTCTGTAGCCTGTGTGG ATCGTCTTGGCCAGGGGAGCTATGGATTTTTCGTAGCCAACTACGGCGGCCCTATGCGCCTCTACGAGTTGGGCCCTAAC CAAATGATCGCCGATGTGGCGCCAGAAGCGAGACTCAATCGGGTGACGGGCGGGCGGGGGTTGGTGGCCTTGCCCTTGGT CTCGCAGCGGATGGACATTTTTGCCGTCAATGAGCAGGGGCCCAACTTTCTGTTTCGCAACCGGGGGGATGGCACCTTTG AAGAGATTGCCGCTGAGGTGGGCCTGGCGGATCCGGACGAGCACGGACGTGGCGTGGCGGCGGTGGATCTGGATGGGGAT GGACGGCTGGATTTGCTCTATGGCAACTGGGAAGGCCCCCATCGCCTCTGGATCCAGACCCCCGACGGTTTTTTTAAGGA TGTAGCCCCCCCGGAGTTGGCTAGGCCCTCCCGCATTCGCACAGTCATCGCTGCCGACTTCGACAACGACGGCTACCCAG AGCTGTTTTTCAACAACATCGGCGAGCCCAACCGTCTGTTTGCTTGGCGCTCAGGCCGTTGGCAAGCCATTGACATTGGA GATGCTGCCGAGCCCCAGGGATTGGGGACAGGAGCAGCAGTGGCCGATGTGGATGGGGATGGTCGTCTGGAATTGTTGAT TGCCCATGGGGAGTCTGGCGCCCAGCCTCTCAGCTTCTATCGCCCTCAGGCCAATGCCAACAACTGGCTGAGGGTTCTGC CCCTCACCCGCCAGGGAGCCCCGGCCCGCGGCGCGTTGGTAAGGCTGCTCACCTCCACCCGTACCCAGATCCAGGCCATC GACGCCGGCAGCGGCTACCTCTGTCAGATGGAGCCGGTGGCCCACTTTGGCCTGGGATCCGAAACAGGGGTCAAGGAAAT CCAGATCCAGTGGCCAGATGGGAAACAGTTGCAGGTGGCCCACCCACCGGTCAACCAGCTTTTGCGGATCCCTTATCCCC GCTAG
Upstream 100 bases:
>100_bases TGATGCGTGGCATGGTTGAAGGGGAAGTTCCAGCGAAGATCCAGCATACCATCAGAGCTGGAAGCTCCACCAGTTCCTAT TGTTCTCCGATGGGATCCCC
Downstream 100 bases:
>100_bases CCGCCAATCTGAGACATGGTGCGCCGGTAGGATCCCTGGCTGCCGGTGTCCCGCCCTTTGAAGTTGATATCCGGCTTGAT GTCCAGCAATTCCCGCACCT
Product: FG-GAP repeat- ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: ASPIC/UnbV; FG-GAP Repeat Protein; FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Fg-Gap; FG-GAP Repeat-Containing Protein; Rhs Family Protein; Fg-Gap Repeat/Aspic/Unbv Domain Protein; Protein Tyrosine Kinase Family
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MFQDCSSQIRFNPPALFYGVAACDLDRDGAFELFVCGFRGSNRVLKWDGQTLVDQADDTLADAGRMAIGVAAADFDGDGQ EELYVLNTDTFGGRKRFGDRLFDWQGSAWVDLFSLPQNQDALNLTAGRSVACVDRLGQGSYGFFVANYGGPMRLYELGPN QMIADVAPEARLNRVTGGRGLVALPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPDEHGRGVAAVDLDGD GRLDLLYGNWEGPHRLWIQTPDGFFKDVAPPELARPSRIRTVIAADFDNDGYPELFFNNIGEPNRLFAWRSGRWQAIDIG DAAEPQGLGTGAAVADVDGDGRLELLIAHGESGAQPLSFYRPQANANNWLRVLPLTRQGAPARGALVRLLTSTRTQIQAI DAGSGYLCQMEPVAHFGLGSETGVKEIQIQWPDGKQLQVAHPPVNQLLRIPYPR
Sequences:
>Translated_454_residues MFQDCSSQIRFNPPALFYGVAACDLDRDGAFELFVCGFRGSNRVLKWDGQTLVDQADDTLADAGRMAIGVAAADFDGDGQ EELYVLNTDTFGGRKRFGDRLFDWQGSAWVDLFSLPQNQDALNLTAGRSVACVDRLGQGSYGFFVANYGGPMRLYELGPN QMIADVAPEARLNRVTGGRGLVALPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPDEHGRGVAAVDLDGD GRLDLLYGNWEGPHRLWIQTPDGFFKDVAPPELARPSRIRTVIAADFDNDGYPELFFNNIGEPNRLFAWRSGRWQAIDIG DAAEPQGLGTGAAVADVDGDGRLELLIAHGESGAQPLSFYRPQANANNWLRVLPLTRQGAPARGALVRLLTSTRTQIQAI DAGSGYLCQMEPVAHFGLGSETGVKEIQIQWPDGKQLQVAHPPVNQLLRIPYPR >Mature_454_residues MFQDCSSQIRFNPPALFYGVAACDLDRDGAFELFVCGFRGSNRVLKWDGQTLVDQADDTLADAGRMAIGVAAADFDGDGQ EELYVLNTDTFGGRKRFGDRLFDWQGSAWVDLFSLPQNQDALNLTAGRSVACVDRLGQGSYGFFVANYGGPMRLYELGPN QMIADVAPEARLNRVTGGRGLVALPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPDEHGRGVAAVDLDGD GRLDLLYGNWEGPHRLWIQTPDGFFKDVAPPELARPSRIRTVIAADFDNDGYPELFFNNIGEPNRLFAWRSGRWQAIDIG DAAEPQGLGTGAAVADVDGDGRLELLIAHGESGAQPLSFYRPQANANNWLRVLPLTRQGAPARGALVRLLTSTRTQIQAI DAGSGYLCQMEPVAHFGLGSETGVKEIQIQWPDGKQLQVAHPPVNQLLRIPYPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=484, Percent_Identity=47.9338842975207, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49571; Mature: 49571
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQDCSSQIRFNPPALFYGVAACDLDRDGAFELFVCGFRGSNRVLKWDGQTLVDQADDTL CCCCCCCCEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCHHHCCCHHH ADAGRMAIGVAAADFDGDGQEELYVLNTDTFGGRKRFGDRLFDWQGSAWVDLFSLPQNQD HHCCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHCCHHCCCCCCCEEEEEECCCCCC ALNLTAGRSVACVDRLGQGSYGFFVANYGGPMRLYELGPNQMIADVAPEARLNRVTGGRG CEEEECCCCEEEHHHCCCCCCEEEEEECCCCEEEEEECCCCEEECCCCCHHHHCCCCCCC LVALPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPDEHGRGVAAVDLDGD EEEECCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC GRLDLLYGNWEGPHRLWIQTPDGFFKDVAPPELARPSRIRTVIAADFDNDGYPELFFNNI CCEEEEECCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCC GEPNRLFAWRSGRWQAIDIGDAAEPQGLGTGAAVADVDGDGRLELLIAHGESGAQPLSFY CCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEE RPQANANNWLRVLPLTRQGAPARGALVRLLTSTRTQIQAIDAGSGYLCQMEPVAHFGLGS CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEECCHHHCCCCC ETGVKEIQIQWPDGKQLQVAHPPVNQLLRIPYPR CCCCEEEEEECCCCCEEEEECCCHHHHEECCCCC >Mature Secondary Structure MFQDCSSQIRFNPPALFYGVAACDLDRDGAFELFVCGFRGSNRVLKWDGQTLVDQADDTL CCCCCCCCEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCHHHCCCHHH ADAGRMAIGVAAADFDGDGQEELYVLNTDTFGGRKRFGDRLFDWQGSAWVDLFSLPQNQD HHCCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHCCHHCCCCCCCEEEEEECCCCCC ALNLTAGRSVACVDRLGQGSYGFFVANYGGPMRLYELGPNQMIADVAPEARLNRVTGGRG CEEEECCCCEEEHHHCCCCCCEEEEEECCCCEEEEEECCCCEEECCCCCHHHHCCCCCCC LVALPLVSQRMDIFAVNEQGPNFLFRNRGDGTFEEIAAEVGLADPDEHGRGVAAVDLDGD EEEECCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC GRLDLLYGNWEGPHRLWIQTPDGFFKDVAPPELARPSRIRTVIAADFDNDGYPELFFNNI CCEEEEECCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCC GEPNRLFAWRSGRWQAIDIGDAAEPQGLGTGAAVADVDGDGRLELLIAHGESGAQPLSFY CCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEE RPQANANNWLRVLPLTRQGAPARGALVRLLTSTRTQIQAIDAGSGYLCQMEPVAHFGLGS CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEECCHHHCCCCC ETGVKEIQIQWPDGKQLQVAHPPVNQLLRIPYPR CCCCEEEEEECCCCCEEEEECCCHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA