Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yycG [H]

Identifier: 86610215

GI number: 86610215

Start: 2887174

End: 2888088

Strand: Direct

Name: yycG [H]

Synonym: CYB_2791

Alternate gene names: 86610215

Gene position: 2887174-2888088 (Clockwise)

Preceding gene: 86610213

Following gene: 86610217

Centisome position: 94.76

GC content: 58.8

Gene sequence:

>915_bases
TTGGCCCTGGCCGATCACCTCTCCATCGCCATTCGGCAGGCGGAATTGCTCCAACAGGTTCAGGAGCTGAACCGCACCCT
GGAAGAAAAGGTACAGGCCCGCACCGCCCAACTGGATCGCCAGATACAGGAATTGCATCGGCTGGATTGCCTGAAAGATG
ACTTCCTTAGCACGGTGTCCCACGAGCTGCGCACCCCTCTTTCCAACATGAAAATGGCCATCCGCCTGCTCAGCTCCGTC
CTGCTGCCTGCCCAGGGCGCTCCCAGATCCCCGGATCCGGCCAAAATCTCTCAGTACTTGAAGGTGTTGGACAACGAATG
TGAGCGGGAGATCAGACTGGTCGAGGATCTGCTGGAACTGCAGCAGTTAGAGGTGCTCAAGGGACTCCGTCCCGCTAACG
CGAACGGTTCACAGCGGCCCTGCTGGTTGGAGCTGCAAGAGTGGTTGCCCCAGATCGCGGAGCCCTTTGCTCAGGAGGCC
CATAGCCGCCATCAGCGCTTCAGCCTTGGGATCCCTTCAGGACTGCCTGCCATTTTTACCCTGCCGGGAGTGCTAAAGTC
GGTGCTGGCGGAATTGCTGAAAAATGCATGTAAATTCACCCCTGCTGGGCACCTGATCAGCCTTCAGGCCACCTGCCATT
CCGACCACCTGGACATCCAAGTCCTCAACACCGGCGTAACCATTCCTCCAGAAGAACAAAAGCGGGTATTCGAGAAGTTC
TATCGGGTGCCCAGCGTGGATCCCTGGCGGCAAGGGGGGACAGGGTTGGGGTTGGCCCTTGTGCAGCAGCGGGTAAGCCT
GTTGCAAGGAAGCATTCACCTCAACAGCGAGGCCAACCACACCTGCTTTACCTTGCGGCTGCCTCGGGTTCTCCCTGTCT
TTGGCCAAGGCAAGCCAGCTCAGCCTAGGGTGTAG

Upstream 100 bases:

>100_bases
TAGCCACTAGTCACTAGCCACTAATAGAGTGCGGGGCTCCTGCGGGTTCTAGCTGAAAACAGCACGTCCCGGTTGGCTGG
CCACCAATCAGGATCTGATC

Downstream 100 bases:

>100_bases
GCGTCGGGGTGGCCGGCTTTGGAGAGTTGGAAGCTTCCCCTTCCTGCAAAACTTCTTGCAAGCGGGCCCGAACCCGCTGG
TTGAGAACAGGATTTTCGTT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MALADHLSIAIRQAELLQQVQELNRTLEEKVQARTAQLDRQIQELHRLDCLKDDFLSTVSHELRTPLSNMKMAIRLLSSV
LLPAQGAPRSPDPAKISQYLKVLDNECEREIRLVEDLLELQQLEVLKGLRPANANGSQRPCWLELQEWLPQIAEPFAQEA
HSRHQRFSLGIPSGLPAIFTLPGVLKSVLAELLKNACKFTPAGHLISLQATCHSDHLDIQVLNTGVTIPPEEQKRVFEKF
YRVPSVDPWRQGGTGLGLALVQQRVSLLQGSIHLNSEANHTCFTLRLPRVLPVFGQGKPAQPRV

Sequences:

>Translated_304_residues
MALADHLSIAIRQAELLQQVQELNRTLEEKVQARTAQLDRQIQELHRLDCLKDDFLSTVSHELRTPLSNMKMAIRLLSSV
LLPAQGAPRSPDPAKISQYLKVLDNECEREIRLVEDLLELQQLEVLKGLRPANANGSQRPCWLELQEWLPQIAEPFAQEA
HSRHQRFSLGIPSGLPAIFTLPGVLKSVLAELLKNACKFTPAGHLISLQATCHSDHLDIQVLNTGVTIPPEEQKRVFEKF
YRVPSVDPWRQGGTGLGLALVQQRVSLLQGSIHLNSEANHTCFTLRLPRVLPVFGQGKPAQPRV
>Mature_303_residues
ALADHLSIAIRQAELLQQVQELNRTLEEKVQARTAQLDRQIQELHRLDCLKDDFLSTVSHELRTPLSNMKMAIRLLSSVL
LPAQGAPRSPDPAKISQYLKVLDNECEREIRLVEDLLELQQLEVLKGLRPANANGSQRPCWLELQEWLPQIAEPFAQEAH
SRHQRFSLGIPSGLPAIFTLPGVLKSVLAELLKNACKFTPAGHLISLQATCHSDHLDIQVLNTGVTIPPEEQKRVFEKFY
RVPSVDPWRQGGTGLGLALVQQRVSLLQGSIHLNSEANHTCFTLRLPRVLPVFGQGKPAQPRV

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=276, Percent_Identity=27.536231884058, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI145693157, Length=239, Percent_Identity=28.8702928870293, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87082128, Length=247, Percent_Identity=25.5060728744939, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786600, Length=280, Percent_Identity=27.1428571428571, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790346, Length=262, Percent_Identity=25.1908396946565, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI87081816, Length=281, Percent_Identity=27.7580071174377, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786783, Length=257, Percent_Identity=28.0155642023346, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790861, Length=243, Percent_Identity=25.9259259259259, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI48994928, Length=246, Percent_Identity=27.6422764227642, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=27.3469387755102, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788713, Length=245, Percent_Identity=24.8979591836735, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=27.0386266094421, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 34063; Mature: 33932

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALADHLSIAIRQAELLQQVQELNRTLEEKVQARTAQLDRQIQELHRLDCLKDDFLSTVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HELRTPLSNMKMAIRLLSSVLLPAQGAPRSPDPAKISQYLKVLDNECEREIRLVEDLLEL
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLEVLKGLRPANANGSQRPCWLELQEWLPQIAEPFAQEAHSRHQRFSLGIPSGLPAIFT
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
LPGVLKSVLAELLKNACKFTPAGHLISLQATCHSDHLDIQVLNTGVTIPPEEQKRVFEKF
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
YRVPSVDPWRQGGTGLGLALVQQRVSLLQGSIHLNSEANHTCFTLRLPRVLPVFGQGKPA
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCHHHHCCCCCCC
QPRV
CCCC
>Mature Secondary Structure 
ALADHLSIAIRQAELLQQVQELNRTLEEKVQARTAQLDRQIQELHRLDCLKDDFLSTVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HELRTPLSNMKMAIRLLSSVLLPAQGAPRSPDPAKISQYLKVLDNECEREIRLVEDLLEL
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLEVLKGLRPANANGSQRPCWLELQEWLPQIAEPFAQEAHSRHQRFSLGIPSGLPAIFT
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
LPGVLKSVLAELLKNACKFTPAGHLISLQATCHSDHLDIQVLNTGVTIPPEEQKRVFEKF
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
YRVPSVDPWRQGGTGLGLALVQQRVSLLQGSIHLNSEANHTCFTLRLPRVLPVFGQGKPA
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCHHHHCCCCCCC
QPRV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9829949; 10878122; 11758928 [H]