Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86610185

Identifier: 86610185

GI number: 86610185

Start: 2855903

End: 2857357

Strand: Direct

Name: 86610185

Synonym: CYB_2759

Alternate gene names: NA

Gene position: 2855903-2857357 (Clockwise)

Preceding gene: 86610184

Following gene: 86610186

Centisome position: 93.74

GC content: 60.96

Gene sequence:

>1455_bases
TTGGCGGCCCTGAGCCAATATCTGCAATGGGTTAGCGGGATCTATAGCTTTATCGCCCCCCATTCGTTGCCGCTGGCGGA
TCTGGCAGTGGCCGGGATCCTGGGAGGGACAGCAGCAGCAGGTCTGGCAGCGCGCCATTGGTGGCAGCAGGCTGGCCGAC
GGCAAAGTACTCCAAACCAGCGGACACAACCGCTGCGGCGGGTTAAGTTAACTCGGAATCAGGTGCAAGCCGATCTGGAA
GATGCCGATCGCCTGATCCAGAAGCTGCAGAATGACATCAGTCGCCGTGCCCTGCGTGCCAAGCTGCAAGAGATCAATCA
GCGGCTTAACCAGGAGGAATTGCATCTGGTGGTGTTCGGCACCAGTTCCGCCGGCAAGACCTCGTTGATCAATGCCTTGA
TGGGCCGACCAGTGGGCGAAACAGCCCCCACCCTGGGCACCACCCAGCAGGGATCCATCCACACCTACCAATTGGAGGGC
TGGAACGGCCCCATTTCCCTTACCGACACACCTGGGCTGCTGACGATTGGGGGAGCAGGTGAAGCGGAAGCCCGCGCCCT
GGCCCAGAAGGCGGATCTGCTGATCTTGGTGGTGGCCGGAGACCTGCTGGCTTCGGAGTATGCCGAAATGCTGGAGTTGG
CCCGGCTGGGCAAATCCGCCATCCTGGCCCTCAACAAAACCGATCAGATGCTGCCGGAGGATGTAGAGACCATCTTGGCC
CATTTGCGCCGACGCACCGCCGGTGTTATCCCTGCCGAACAGGTGGTGGCCATCGCCGCTGATCCAGAGCCCCTCAAGGT
TCGCTACTACTCCGAAGATGGCTCTGTGTGGGAAACTTGGGAGCCGCAGCCCCCCGAGACAGAGGCCCTCATTCAACAAA
TGGCTCACCTGCTGCAGCAGAAGGGATCCCACCTGCGCTTGGCCAATGCCTTGTTGCAAACCCGAACTCTCAGCGAAGCC
GTCCAGCAGGCCCTCCAAGAAGAACGTCGCCAACAGGGTCGCCAGATCGTGGAACGGATGCAGTGGGCCACCGCTGCTGC
CCTGGCGGCAAACCCTCTTCCTGCTTTGGATGTGCTGGCAGGAGTAGCCATTCAGGCGCGCATGATTGGGGAACTGCACC
AGGTGTTTGACCGACGCATTACCTTACGCCGGGCCCAGCAAATCGCCCAGAGTTTGGCGCAAATGGTGGTGCAACTGGGG
GGGCTGGAGCTGGCCACTCAGGCTTTGGGCTCTCTGCTCAAGGCCAGCCCCTTGATGGTTATGGGGATCCCCCTGCAGGC
AGTGACGGGGGCCTATCTGACACGGGTGGCGGGGCTCAGTTACCTAGAGTGGCTGTCCTCTGGGGATCCCTGGCAAGAGG
AAATCCTGCAAGAGCGGATTAGGCAGCAGCTCCAAAACCGTCATCCTCTGGCCTTTCTCACCCAACTGGCCCGCCAAGCC
CATTCCAACAGCTAG

Upstream 100 bases:

>100_bases
TCAGCAATTTTGGGTTGCTTGATTTGAAGATTTGGGCAGGCTGTGGGTTGGGATGGTGCTGTCGCGCTCCACTTGGGTGT
GGTTGTGGGCAGGGCTGGGT

Downstream 100 bases:

>100_bases
TCCAAGCATCCGTCTTTTCGCCGCCACAGGCCCAACCTATCCCGTTCTCCGCCCGCTGCGGAAAATCCATTACTCCATTA
CACTGAATACAGCTTTCTAA

Product: GTP-binding domain-containing protein

Products: NA

Alternate protein names: Membrane Associated GTPase; GTPase SAR1 And Related Small G Proteins; GTPase SAR1-Like Protein; GTPase SAR1 And Related Small G Protein

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MAALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQRTQPLRRVKLTRNQVQADLE
DADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFGTSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEG
WNGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA
HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQKGSHLRLANALLQTRTLSEA
VQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLAGVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLG
GLELATQALGSLLKASPLMVMGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA
HSNS

Sequences:

>Translated_484_residues
MAALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQRTQPLRRVKLTRNQVQADLE
DADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFGTSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEG
WNGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA
HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQKGSHLRLANALLQTRTLSEA
VQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLAGVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLG
GLELATQALGSLLKASPLMVMGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA
HSNS
>Mature_483_residues
AALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQRTQPLRRVKLTRNQVQADLED
ADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFGTSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEGW
NGPISLTDTPGLLTIGGAGEAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILAH
LRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQKGSHLRLANALLQTRTLSEAV
QQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLAGVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLGG
LELATQALGSLLKASPLMVMGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQAH
SNS

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53059; Mature: 52927

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQ
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
RTQPLRRVKLTRNQVQADLEDADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
TSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEGWNGPISLTDTPGLLTIGGAG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCC
EAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA
CHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHCCHHHHHHHHH
HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQ
HHHHHHCCCCCHHHEEEEECCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH
KGSHLRLANALLQTRTLSEAVQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLGGLELATQALGSLLKASPLMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
MGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA
ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
HSNS
CCCC
>Mature Secondary Structure 
AALSQYLQWVSGIYSFIAPHSLPLADLAVAGILGGTAAAGLAARHWWQQAGRRQSTPNQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
RTQPLRRVKLTRNQVQADLEDADRLIQKLQNDISRRALRAKLQEINQRLNQEELHLVVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
TSSAGKTSLINALMGRPVGETAPTLGTTQQGSIHTYQLEGWNGPISLTDTPGLLTIGGAG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCC
EAEARALAQKADLLILVVAGDLLASEYAEMLELARLGKSAILALNKTDQMLPEDVETILA
CHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHCCHHHHHHHHH
HLRRRTAGVIPAEQVVAIAADPEPLKVRYYSEDGSVWETWEPQPPETEALIQQMAHLLQQ
HHHHHHCCCCCHHHEEEEECCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH
KGSHLRLANALLQTRTLSEAVQQALQEERRQQGRQIVERMQWATAAALAANPLPALDVLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GVAIQARMIGELHQVFDRRITLRRAQQIAQSLAQMVVQLGGLELATQALGSLLKASPLMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
MGIPLQAVTGAYLTRVAGLSYLEWLSSGDPWQEEILQERIRQQLQNRHPLAFLTQLARQA
ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
HSNS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA