| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is tar [C]
Identifier: 86610177
GI number: 86610177
Start: 2845498
End: 2847735
Strand: Direct
Name: tar [C]
Synonym: CYB_2751
Alternate gene names: 86610177
Gene position: 2845498-2847735 (Clockwise)
Preceding gene: 86610176
Following gene: 86610178
Centisome position: 93.4
GC content: 59.87
Gene sequence:
>2238_bases ATGGTTTCCTTCCGTCCCCTCTTTCTCAGGCCTGCTCCATCTTCCCGGCCCCAACGCAAAGTCGCGGGATCCCGCCTGGC CCTGGCAATCAGTTTTCCTCTGGGCATCAGCTCCCTGCTGTTTGCCGTCTCTGCCGGCAGCGTAGCCCGCACCTATTTCG AGTTCAAGCCGGCGATCTCGCGGCAGTTCACCCTGCAAAACCTGAGCGATCAGGTGATCTATTTGGATGAAGTCTTGACC ATGTCTGCCCGCATGGCCGCTGCCAGCGGGGATCTGTCCTGGGAAGAGCGCTACAACATCCATGTCCCTCAGTTGGATGA GGTGCTGGCGGAGATTCAGCAATTGGATCCCGCCTCTTACGAAGCCTATGCAGCCAAAACCACAGCAGCCAACATCAAGC TGGTGGAGTGGGAAGTGCAGGCTTTTGATCTGATTCGGGCCGGCGAGCAGGAACGGGCTTTCAACTTGCTGCACAGCCCT GAGTACGAAGAGCAAAAGCGCATCTACGCCGAAGGGATCAACCAAACCCTGGAGGCCATTCGCAGCAACATTCAGGCCAG CGTCCAGCTTTACGAGCAAAATCTGCTGCAGGCTTTGATCTTTTCCGGCATCAGCTTCCCGATTCTGCTGCTGAGCTGGG GGATCATTTTGATCCTGGTGCGCAACTTTGTGCGGGAACGCAACGCCACCTACGAGCGACAGGTTTCCGACACCCGACTG GCCCAGCGGTTTGCCGATATTGCCCGGATTCGCCAAGAGCAAGAGCTGATCGATCCCCTAACTGACTTGTTGGGCGAGAT GCGCCAGCGCTTCGGTGCCGAACGAGTGGCCTTCTATCGCTTGACCGCTCCCGAAGAGGCGCAGGTTATCGCTGAATCTC ACGACAGCCGCCTGCCCGACACCTTGGGCACCCTCCTCCGCAGGATCCCGGCTCCGATCCAGCAGGCTCTCCACGGCGGG CAAGTTTACGCTTTTGGCCCGGTGCCTAGGCCAGATCTGGGCGCCGACTACCTGCAGAGGCTGGCCACAGCCCAACTGAA AGCCGAGATGATAGCGCCGGTGGTGCGTGGCGATGAGCTTTACGGTTTTTTGGCAATAGGCCGCGCCCAAAGCCAGAGCT GGTCTGACGAAGAACAGAAAACCTTGGCAGAGCTGGCCAACCGCCTGGGTCAAGCTTTGGGTAACCTGGGGGCGCTGGAG CAAAAAGCCGTGGCCGCCCAGGAACGGGAGCGGTCGGAAGCGCTGCAAAGAGAGCTGCTGCAGCTTATCAGCGAGGTCAC AGAAGCCTCGCGGGGGGATCTCACGGTGCGGGCGCAGCTAACAGCCGGACAAGTTGGCATCATGGCGGACTTTTTCAACG TCATTATCGAGAGCTTGCGCGACATCGTGATTCAAGTGCAGCAGGCCGCCGGTCAAGTCAACCAATCCATTGGTCGTGAC GAGGCAGCCATTCGCGAGTTGGCCGAAGCCGCTCTCCGACAGGCCACCCAAATCGAAGAGACCTTGCGCTCTGTCGAGCA AATGACGCTCTCAATCGAGGAGGTAGCCGATAAAGCCCAACAGGCCGCCACCGTTGCCGAATCTGCCGCCGCCACGGCCA TCAACAGCAGCTTGACTATGGATCGCACAGTGCAAAACATCCTGCAACTGCGGGAAACGGTGGCCGAAACGGCCAAGAAG GTGAAGCGGCTGGGGGAATCTTCCCAGCAGATTTCCAAGGTGGTGTCCTTGATCAACCAGATTGCGCTGAAAACCAACCT CTTGGCGGTGAACGCCAGTATCGAGGCAGCCCGTGCCGGCGAAGAAGGGCGAGGTTTTGCGGTGGTCGCCGAGGAAGTCG GGGCACTGGCGGCCCAGTCGGCAGAAGCCACCCGCGAGATCGAGCGCATTGTGGAAGGGATCCAACGGGAAACCGGCGAG GTGGTACAGGCGATGGAAACCAGCACCGGCCAGGTGGTGGAGGGAACCCGCTTGGTGGAAGCAGCCAAGCAGAGCCTGGG ACAAATTGTGGAAGTCTCGCGGCAGGTGAACCAGCTCTTTCAGGCCATTGCCCGCTCCACCGATGCCCAGGCAGATGCAT CTCAAACGGTGCGCCAGTTGATGCAGCAAATCGCCAACATTGCCGCCCAGACGGCGGCAGCCTCGCAGCAGGTGGCCAAC TCTCTCCAGGCTACGGTGGCGGTTGCCCGTCAGTTGCAGACTTCTGTGTCCACCTTCAAGGTGGGGGAGGCGGTTTAG
Upstream 100 bases:
>100_bases TCTTGCCATTGTCCAAAAGCTCAACTCAGTTGATTCCTCGGCAAACCCTTGATCTTGGCGACCTTTTCCCCGACTTACCC TCACTTAAAGGCAAAATTCT
Downstream 100 bases:
>100_bases CATGGGGCCGAATCCCACTTCCCTCGACCCACGCGAGTGGCAGGTTAGGCTGCAGTTTTTGGACGAAGCCCAGGCTTACC TCGACACCCTGGAGGCAGGG
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 745; Mature: 745
Protein sequence:
>745_residues MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAISRQFTLQNLSDQVIYLDEVLT MSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASYEAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSP EYEEQKRIYAEGINQTLEAIRSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPDTLGTLLRRIPAPIQQALHGG QVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDELYGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALE QKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKK VKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGE VVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN SLQATVAVARQLQTSVSTFKVGEAV
Sequences:
>Translated_745_residues MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAISRQFTLQNLSDQVIYLDEVLT MSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASYEAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSP EYEEQKRIYAEGINQTLEAIRSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPDTLGTLLRRIPAPIQQALHGG QVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDELYGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALE QKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKK VKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGE VVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN SLQATVAVARQLQTSVSTFKVGEAV >Mature_745_residues MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAISRQFTLQNLSDQVIYLDEVLT MSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASYEAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSP EYEEQKRIYAEGINQTLEAIRSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPDTLGTLLRRIPAPIQQALHGG QVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDELYGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALE QKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKK VKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGE VVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN SLQATVAVARQLQTSVSTFKVGEAV
Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=274, Percent_Identity=32.1167883211679, Blast_Score=126, Evalue=5e-30, Organism=Escherichia coli, GI2367378, Length=242, Percent_Identity=35.5371900826446, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1788194, Length=297, Percent_Identity=32.6599326599327, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1787690, Length=283, Percent_Identity=31.095406360424, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=31.7518248175182, Blast_Score=104, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 81613; Mature: 81613
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50885 HAMP ; PS50046 PHYTOCHROME_2 ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAIS CCCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH RQFTLQNLSDQVIYLDEVLTMSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASY HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCH EAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSPEYEEQKRIYAEGINQTLEAI HHHHHHHHHCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHCCCCCCH TLGTLLRRIPAPIQQALHGGQVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDEL HHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH YGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALEQKAVAAQERERSEALQRELL HHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD HHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH DRTVQNILQLRETVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCC EEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGEVVQAMETSTGQVVEGTRLVE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQATVAVARQLQTSVSTFKVGEAV HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAIS CCCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH RQFTLQNLSDQVIYLDEVLTMSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASY HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCH EAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSPEYEEQKRIYAEGINQTLEAI HHHHHHHHHCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHCCCCCCH TLGTLLRRIPAPIQQALHGGQVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDEL HHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH YGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALEQKAVAAQERERSEALQRELL HHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD HHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH DRTVQNILQLRETVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCC EEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGEVVQAMETSTGQVVEGTRLVE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQATVAVARQLQTSVSTFKVGEAV HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]