Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is tar [C]

Identifier: 86610177

GI number: 86610177

Start: 2845498

End: 2847735

Strand: Direct

Name: tar [C]

Synonym: CYB_2751

Alternate gene names: 86610177

Gene position: 2845498-2847735 (Clockwise)

Preceding gene: 86610176

Following gene: 86610178

Centisome position: 93.4

GC content: 59.87

Gene sequence:

>2238_bases
ATGGTTTCCTTCCGTCCCCTCTTTCTCAGGCCTGCTCCATCTTCCCGGCCCCAACGCAAAGTCGCGGGATCCCGCCTGGC
CCTGGCAATCAGTTTTCCTCTGGGCATCAGCTCCCTGCTGTTTGCCGTCTCTGCCGGCAGCGTAGCCCGCACCTATTTCG
AGTTCAAGCCGGCGATCTCGCGGCAGTTCACCCTGCAAAACCTGAGCGATCAGGTGATCTATTTGGATGAAGTCTTGACC
ATGTCTGCCCGCATGGCCGCTGCCAGCGGGGATCTGTCCTGGGAAGAGCGCTACAACATCCATGTCCCTCAGTTGGATGA
GGTGCTGGCGGAGATTCAGCAATTGGATCCCGCCTCTTACGAAGCCTATGCAGCCAAAACCACAGCAGCCAACATCAAGC
TGGTGGAGTGGGAAGTGCAGGCTTTTGATCTGATTCGGGCCGGCGAGCAGGAACGGGCTTTCAACTTGCTGCACAGCCCT
GAGTACGAAGAGCAAAAGCGCATCTACGCCGAAGGGATCAACCAAACCCTGGAGGCCATTCGCAGCAACATTCAGGCCAG
CGTCCAGCTTTACGAGCAAAATCTGCTGCAGGCTTTGATCTTTTCCGGCATCAGCTTCCCGATTCTGCTGCTGAGCTGGG
GGATCATTTTGATCCTGGTGCGCAACTTTGTGCGGGAACGCAACGCCACCTACGAGCGACAGGTTTCCGACACCCGACTG
GCCCAGCGGTTTGCCGATATTGCCCGGATTCGCCAAGAGCAAGAGCTGATCGATCCCCTAACTGACTTGTTGGGCGAGAT
GCGCCAGCGCTTCGGTGCCGAACGAGTGGCCTTCTATCGCTTGACCGCTCCCGAAGAGGCGCAGGTTATCGCTGAATCTC
ACGACAGCCGCCTGCCCGACACCTTGGGCACCCTCCTCCGCAGGATCCCGGCTCCGATCCAGCAGGCTCTCCACGGCGGG
CAAGTTTACGCTTTTGGCCCGGTGCCTAGGCCAGATCTGGGCGCCGACTACCTGCAGAGGCTGGCCACAGCCCAACTGAA
AGCCGAGATGATAGCGCCGGTGGTGCGTGGCGATGAGCTTTACGGTTTTTTGGCAATAGGCCGCGCCCAAAGCCAGAGCT
GGTCTGACGAAGAACAGAAAACCTTGGCAGAGCTGGCCAACCGCCTGGGTCAAGCTTTGGGTAACCTGGGGGCGCTGGAG
CAAAAAGCCGTGGCCGCCCAGGAACGGGAGCGGTCGGAAGCGCTGCAAAGAGAGCTGCTGCAGCTTATCAGCGAGGTCAC
AGAAGCCTCGCGGGGGGATCTCACGGTGCGGGCGCAGCTAACAGCCGGACAAGTTGGCATCATGGCGGACTTTTTCAACG
TCATTATCGAGAGCTTGCGCGACATCGTGATTCAAGTGCAGCAGGCCGCCGGTCAAGTCAACCAATCCATTGGTCGTGAC
GAGGCAGCCATTCGCGAGTTGGCCGAAGCCGCTCTCCGACAGGCCACCCAAATCGAAGAGACCTTGCGCTCTGTCGAGCA
AATGACGCTCTCAATCGAGGAGGTAGCCGATAAAGCCCAACAGGCCGCCACCGTTGCCGAATCTGCCGCCGCCACGGCCA
TCAACAGCAGCTTGACTATGGATCGCACAGTGCAAAACATCCTGCAACTGCGGGAAACGGTGGCCGAAACGGCCAAGAAG
GTGAAGCGGCTGGGGGAATCTTCCCAGCAGATTTCCAAGGTGGTGTCCTTGATCAACCAGATTGCGCTGAAAACCAACCT
CTTGGCGGTGAACGCCAGTATCGAGGCAGCCCGTGCCGGCGAAGAAGGGCGAGGTTTTGCGGTGGTCGCCGAGGAAGTCG
GGGCACTGGCGGCCCAGTCGGCAGAAGCCACCCGCGAGATCGAGCGCATTGTGGAAGGGATCCAACGGGAAACCGGCGAG
GTGGTACAGGCGATGGAAACCAGCACCGGCCAGGTGGTGGAGGGAACCCGCTTGGTGGAAGCAGCCAAGCAGAGCCTGGG
ACAAATTGTGGAAGTCTCGCGGCAGGTGAACCAGCTCTTTCAGGCCATTGCCCGCTCCACCGATGCCCAGGCAGATGCAT
CTCAAACGGTGCGCCAGTTGATGCAGCAAATCGCCAACATTGCCGCCCAGACGGCGGCAGCCTCGCAGCAGGTGGCCAAC
TCTCTCCAGGCTACGGTGGCGGTTGCCCGTCAGTTGCAGACTTCTGTGTCCACCTTCAAGGTGGGGGAGGCGGTTTAG

Upstream 100 bases:

>100_bases
TCTTGCCATTGTCCAAAAGCTCAACTCAGTTGATTCCTCGGCAAACCCTTGATCTTGGCGACCTTTTCCCCGACTTACCC
TCACTTAAAGGCAAAATTCT

Downstream 100 bases:

>100_bases
CATGGGGCCGAATCCCACTTCCCTCGACCCACGCGAGTGGCAGGTTAGGCTGCAGTTTTTGGACGAAGCCCAGGCTTACC
TCGACACCCTGGAGGCAGGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 745; Mature: 745

Protein sequence:

>745_residues
MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAISRQFTLQNLSDQVIYLDEVLT
MSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASYEAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSP
EYEEQKRIYAEGINQTLEAIRSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL
AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPDTLGTLLRRIPAPIQQALHGG
QVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDELYGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALE
QKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD
EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKK
VKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGE
VVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN
SLQATVAVARQLQTSVSTFKVGEAV

Sequences:

>Translated_745_residues
MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAISRQFTLQNLSDQVIYLDEVLT
MSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASYEAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSP
EYEEQKRIYAEGINQTLEAIRSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL
AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPDTLGTLLRRIPAPIQQALHGG
QVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDELYGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALE
QKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD
EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKK
VKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGE
VVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN
SLQATVAVARQLQTSVSTFKVGEAV
>Mature_745_residues
MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAISRQFTLQNLSDQVIYLDEVLT
MSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASYEAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSP
EYEEQKRIYAEGINQTLEAIRSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL
AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPDTLGTLLRRIPAPIQQALHGG
QVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDELYGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALE
QKAVAAQERERSEALQRELLQLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD
EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTMDRTVQNILQLRETVAETAKK
VKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAGEEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGE
VVQAMETSTGQVVEGTRLVEAAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN
SLQATVAVARQLQTSVSTFKVGEAV

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=274, Percent_Identity=32.1167883211679, Blast_Score=126, Evalue=5e-30,
Organism=Escherichia coli, GI2367378, Length=242, Percent_Identity=35.5371900826446, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788194, Length=297, Percent_Identity=32.6599326599327, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1787690, Length=283, Percent_Identity=31.095406360424, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=31.7518248175182, Blast_Score=104, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003018
- InterPro:   IPR003660
- InterPro:   IPR016132 [H]

Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 81613; Mature: 81613

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50885 HAMP ; PS50046 PHYTOCHROME_2 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAIS
CCCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH
RQFTLQNLSDQVIYLDEVLTMSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASY
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCH
EAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSPEYEEQKRIYAEGINQTLEAI
HHHHHHHHHCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHCCCCCCH
TLGTLLRRIPAPIQQALHGGQVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDEL
HHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
YGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALEQKAVAAQERERSEALQRELL
HHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD
HHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DRTVQNILQLRETVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCC
EEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGEVVQAMETSTGQVVEGTRLVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQATVAVARQLQTSVSTFKVGEAV
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVSFRPLFLRPAPSSRPQRKVAGSRLALAISFPLGISSLLFAVSAGSVARTYFEFKPAIS
CCCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH
RQFTLQNLSDQVIYLDEVLTMSARMAAASGDLSWEERYNIHVPQLDEVLAEIQQLDPASY
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCH
EAYAAKTTAANIKLVEWEVQAFDLIRAGEQERAFNLLHSPEYEEQKRIYAEGINQTLEAI
HHHHHHHHHCCEEEEEEHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RSNIQASVQLYEQNLLQALIFSGISFPILLLSWGIILILVRNFVRERNATYERQVSDTRL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AQRFADIARIRQEQELIDPLTDLLGEMRQRFGAERVAFYRLTAPEEAQVIAESHDSRLPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHCCCCCCH
TLGTLLRRIPAPIQQALHGGQVYAFGPVPRPDLGADYLQRLATAQLKAEMIAPVVRGDEL
HHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
YGFLAIGRAQSQSWSDEEQKTLAELANRLGQALGNLGALEQKAVAAQERERSEALQRELL
HHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QLISEVTEASRGDLTVRAQLTAGQVGIMADFFNVIIESLRDIVIQVQQAAGQVNQSIGRD
HHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EAAIRELAEAALRQATQIEETLRSVEQMTLSIEEVADKAQQAATVAESAAATAINSSLTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DRTVQNILQLRETVAETAKKVKRLGESSQQISKVVSLINQIALKTNLLAVNASIEAARAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCC
EEGRGFAVVAEEVGALAAQSAEATREIERIVEGIQRETGEVVQAMETSTGQVVEGTRLVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AAKQSLGQIVEVSRQVNQLFQAIARSTDAQADASQTVRQLMQQIANIAAQTAAASQQVAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLQATVAVARQLQTSVSTFKVGEAV
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]