| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is insQ [H]
Identifier: 86610139
GI number: 86610139
Start: 2804326
End: 2806095
Strand: Direct
Name: insQ [H]
Synonym: CYB_2714
Alternate gene names: 86610139
Gene position: 2804326-2806095 (Clockwise)
Preceding gene: 86610138
Following gene: 86610144
Centisome position: 92.05
GC content: 64.18
Gene sequence:
>1770_bases GTGCAACGACTTCAAGCCTTCAAGTACGAATTGCTGCCCAACGGCCAGCAGGAACGGCAGATGCGCCGCTTTGCTGGCTC CTGCCGGTTCGTCTACAACAAAGCACTGGCGTTGCAGAAGGAGCGTCACGAGCAAGGTCAGAAAAAGCTAGGCTATGCGG GCTTGTGCCAGCTGCTCACCGCGTGGCGCCACAGCGCAGATACGGCGTGGCTGGCGGATGCGCCGGTGCATCCGCTGCAA CAGGCGCTCCAGGATTTGGAGCGAGCCTACAGCCACTTCTTCGCCCAGCGCGCCGGCTTCCCGAAGTTCAAGAAAAAAGG CCGGTCGGACAGTTTCCGTTATCCCGACCCCAAGCAAATCCAGCTGGACCAGGCCAACAGCCGCATCTTTCTGCCCAAAC TTGGCTGGCTGCGTTATCGCAACAGCCGCGACGTGGTGGGCAAGGTCAAGAACGTCACCGTATCCAAGCACGCTGGCAAG TGGTTCGTGTCGATCCAGACCGAGCGGGAGGTTAATTGGCCTATTCCGCAGGGGGGCGCAGTGGGCATGGACATGGGCAT TGCCCGCTTGGCTACCCTCTCGGACGGCACGTTCTACGCGCCCCTCAACAGCTTCAAGCGGCACGAGGCGCGCTTGCGCA AGGCACAGCAAGCGCTCTCCCGCAAAGTCAAGTTCAGCAACAACTGGAAGAAGGCAAAAGCCCGCCTCCAGCGTATTCAT TCTCAGATGGCCAACGCCCGCCGCGACTTCCTGCACAAGGTCTCGACCGCGATTTGCAAAAGCCAGGCAATCGTGTGCAT CGAGGACTTGCGGGTGCGGAATATGTCCAAGTTGGCGGCAGGGACAGCAGATGCTCCTGGGAAGAACGTCCGCGCCAAGT CAGCGTTAAACAAAGCCATTCTCGACCAGGGGTGGTATGAGTTCCGCTGCATGCTGGAGTACAAGCTGGCCTGGAAAGGC GGCAGGCTCATTGTCGTGCCGCCGCAGAACCCGAGCCGCACCTGTCCATGTTGCGGCCATGTTTCATCAGACAACCGCCA GACCCAAGCCTGGTTCGAGTGCGTGGCGTGCGGCTATGAGAATAACGCCGATCGCGGCAGCGGGCCGGAGGCCTTTCGCG GCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGG CCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGC CTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCG GCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCGCGGCAGCGGGCCGGAGGCCTTTCTGGTCGGTGCC ATCAACATCCTTGCTCGCGGGATACAGCTGTTGCGAGACGAAGGGCAGGACACGACCGACGCTGCGGTCGGGATGCGGGT GGGTGAACCACCCGTGTCAGCCTGGATGGCCTGTGGATCGAACCGCACGGGCGGTCGGAAGCAGGAACCCGCCGAGACGA CTGCGCAAGGAGCCATCCATGCGCAGCGTGGTAGGAATCTCCGGCCTTCAGGCCGGGGAGGATGTCAAGATTCCCGTTTG CGACAGCTTCAGCCCCTTTCTCAAAGGGAGAGAGGAGTTGAGGCGATGCACAGCCCGACTGGGAATGCTCCTCTTGGCTC AATTGGCTGA
Upstream 100 bases:
>100_bases AAAAGGCGCGGCAAGCCCCGTCCTTCAGGGCAGGGAAGGATAGCGCGAACCGTAGCCTATATCGTTGTCATCACGCATAG GTCAAGAATACGATTGAGCG
Downstream 100 bases:
>100_bases TGAACCAGAATCCAGCCCCTGGAGTTGCTCCCACTGGGCGGGGGTAAAGGTGCGCAGGGCTAAAGCATGTAGGCGGCCAT CCTGCAGGTAAGCTTTCAGG
Product: ISSoc9, transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLTAWRHSADTAWLADAPVHPLQ QALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQIQLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGK WFVSIQTEREVNWPIPQGGAVGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAILDQGWYEFRCMLEYKLAWKG GRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYENNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSG PEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIHAQRGRNLRPSGRGGCQDSRL RQLQPLSQRERGVEAMHSPTGNAPLGSIG
Sequences:
>Translated_589_residues MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLTAWRHSADTAWLADAPVHPLQ QALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQIQLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGK WFVSIQTEREVNWPIPQGGAVGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAILDQGWYEFRCMLEYKLAWKG GRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYENNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSG PEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIHAQRGRNLRPSGRGGCQDSRL RQLQPLSQRERGVEAMHSPTGNAPLGSIG >Mature_589_residues MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLTAWRHSADTAWLADAPVHPLQ QALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQIQLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGK WFVSIQTEREVNWPIPQGGAVGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAILDQGWYEFRCMLEYKLAWKG GRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYENNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSG PEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIHAQRGRNLRPSGRGGCQDSRL RQLQPLSQRERGVEAMHSPTGNAPLGSIG
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transposase 35 family [H]
Homologues:
Organism=Homo sapiens, GI118722349, Length=107, Percent_Identity=45.7943925233645, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI288549314, Length=345, Percent_Identity=58.2608695652174, Blast_Score=441, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001959 - InterPro: IPR010095 - InterPro: IPR021027 [H]
Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]
EC number: NA
Molecular weight: Translated: 64632; Mature: 64632
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLT CCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AWRHSADTAWLADAPVHPLQQALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQI HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEE QLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGKWFVSIQTEREVNWPIPQGGA EEECCCCEEEEECCCHHEECCCCHHHHHHHCEEEECCCCEEEEEEEECCCCCCCCCCCCC VGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH CCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAI HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LDQGWYEFRCMLEYKLAWKGGRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYE HHCCHHEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC NNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAF CCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHH RGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA CCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCCCCCCCCCEEHHHH INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIH HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AQRGRNLRPSGRGGCQDSRLRQLQPLSQRERGVEAMHSPTGNAPLGSIG HHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQRLQAFKYELLPNGQQERQMRRFAGSCRFVYNKALALQKERHEQGQKKLGYAGLCQLLT CCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AWRHSADTAWLADAPVHPLQQALQDLERAYSHFFAQRAGFPKFKKKGRSDSFRYPDPKQI HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEE QLDQANSRIFLPKLGWLRYRNSRDVVGKVKNVTVSKHAGKWFVSIQTEREVNWPIPQGGA EEECCCCEEEEECCCHHEECCCCHHHHHHHCEEEECCCCEEEEEEEECCCCCCCCCCCCC VGMDMGIARLATLSDGTFYAPLNSFKRHEARLRKAQQALSRKVKFSNNWKKAKARLQRIH CCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SQMANARRDFLHKVSTAICKSQAIVCIEDLRVRNMSKLAAGTADAPGKNVRAKSALNKAI HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LDQGWYEFRCMLEYKLAWKGGRLIVVPPQNPSRTCPCCGHVSSDNRQTQAWFECVACGYE HHCCHHEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC NNADRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAF CCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHH RGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFRGSGPEAFLVGA CCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCHHCCCCCCCCCCCCCCEEHHHH INILARGIQLLRDEGQDTTDAAVGMRVGEPPVSAWMACGSNRTGGRKQEPAETTAQGAIH HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AQRGRNLRPSGRGGCQDSRLRQLQPLSQRERGVEAMHSPTGNAPLGSIG HHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]