| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610109
Identifier: 86610109
GI number: 86610109
Start: 2767423
End: 2768010
Strand: Direct
Name: 86610109
Synonym: CYB_2682
Alternate gene names: NA
Gene position: 2767423-2768010 (Clockwise)
Preceding gene: 86610098
Following gene: 86610110
Centisome position: 90.83
GC content: 60.2
Gene sequence:
>588_bases ATGACTCCCCAGAGTTGGCTGGTGGATGCAATCTGGCTGGACTACCGCTTGGCAGTGGCGCTGACGGTGGTGATGCCATT GCTGCTGCTGATTTGGGCTTTTGCGGTGGGGTTGCGGCCCTTGATTCAGCTATTGATCGTTTATTGGCGGGTATCGAGCC TCTTGGCGGTGACGGTGTACCTGATGATTGGGGGCCTGCCCGTCAGCTTTCTCAGTGGAGCAATGGCGCGGCTGTTGATC TTGGTTTGTCTTTGGTTTTGGCGGGACTGGAGTGCTGCTCTCGAGCAGTCGAGAACCTGGGCGGCGCGAGCCTTTTTGCT CTGGCGGTGGGGCCTGACTGGTTATATGGGGGCCGGGATCCTCTTTTCGGGGGCCTTTGTGCCCTGTGCTTTCCGCACTT CTCTGCCAGAGGAGTGCCGGGCTTGGTTTGGGCCACCGCTGGGGTTTCGGGAGATCTTCCATCCCAATGTATCGCCGGAG CTGCTGGGGAGCGTGGGGGCCTGGGGGCTGGTGGCCTACCTGCTCTACAGCCTCTACTTTGTCTGGCGGCTGCGACCCGG AACTGATAAGGGGGAACTGGAAGCATGA
Upstream 100 bases:
>100_bases GGGGATGGTCAGCAGGCGTTAACATTCCGTAACTCTCTGTGTCCCGTCCTGGATCCCCCAGGTTTCATATACTAAGGGGC AGGAGTGGCAGAGGGTGAGG
Downstream 100 bases:
>100_bases GGGCCCTGCCTTGGCCCTTGGCCTTGGAGCGCTATAGCCAAGACCACCCGCAAGAGGTGCTGCGGGTTGAGGTGGAAAGC GAGGGAGAGTCTGATCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTPQSWLVDAIWLDYRLAVALTVVMPLLLLIWAFAVGLRPLIQLLIVYWRVSSLLAVTVYLMIGGLPVSFLSGAMARLLI LVCLWFWRDWSAALEQSRTWAARAFLLWRWGLTGYMGAGILFSGAFVPCAFRTSLPEECRAWFGPPLGFREIFHPNVSPE LLGSVGAWGLVAYLLYSLYFVWRLRPGTDKGELEA
Sequences:
>Translated_195_residues MTPQSWLVDAIWLDYRLAVALTVVMPLLLLIWAFAVGLRPLIQLLIVYWRVSSLLAVTVYLMIGGLPVSFLSGAMARLLI LVCLWFWRDWSAALEQSRTWAARAFLLWRWGLTGYMGAGILFSGAFVPCAFRTSLPEECRAWFGPPLGFREIFHPNVSPE LLGSVGAWGLVAYLLYSLYFVWRLRPGTDKGELEA >Mature_194_residues TPQSWLVDAIWLDYRLAVALTVVMPLLLLIWAFAVGLRPLIQLLIVYWRVSSLLAVTVYLMIGGLPVSFLSGAMARLLIL VCLWFWRDWSAALEQSRTWAARAFLLWRWGLTGYMGAGILFSGAFVPCAFRTSLPEECRAWFGPPLGFREIFHPNVSPEL LGSVGAWGLVAYLLYSLYFVWRLRPGTDKGELEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22044; Mature: 21913
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQSWLVDAIWLDYRLAVALTVVMPLLLLIWAFAVGLRPLIQLLIVYWRVSSLLAVTVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMIGGLPVSFLSGAMARLLILVCLWFWRDWSAALEQSRTWAARAFLLWRWGLTGYMGAGI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSGAFVPCAFRTSLPEECRAWFGPPLGFREIFHPNVSPELLGSVGAWGLVAYLLYSLYF HHHCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VWRLRPGTDKGELEA HHHCCCCCCCCCCCC >Mature Secondary Structure TPQSWLVDAIWLDYRLAVALTVVMPLLLLIWAFAVGLRPLIQLLIVYWRVSSLLAVTVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMIGGLPVSFLSGAMARLLILVCLWFWRDWSAALEQSRTWAARAFLLWRWGLTGYMGAGI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSGAFVPCAFRTSLPEECRAWFGPPLGFREIFHPNVSPELLGSVGAWGLVAYLLYSLYF HHHCCHHHHHHHCCCCHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VWRLRPGTDKGELEA HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA