| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610050
Identifier: 86610050
GI number: 86610050
Start: 2712092
End: 2712682
Strand: Direct
Name: 86610050
Synonym: CYB_2619
Alternate gene names: NA
Gene position: 2712092-2712682 (Clockwise)
Preceding gene: 86610049
Following gene: 86610051
Centisome position: 89.02
GC content: 57.53
Gene sequence:
>591_bases TTGGGTGCTCTAGCCGTTTTCAACGCTTGGATCTCTTCCCAAACTCAGCCTCTGCAGAGCTTGCTGCCGGGAGAGGAAAG GCATCACTTCTGGCGCGGCCATCGCCTGTTTTACAAGGTCATGGGATCCGGCCAGCCGTTGTTGTTGTTGCACGGCATTG GGGCAGGCTCCTCCAGCTATGAGTTTCGTGCCATTATGGCGGAGCTGGGGCAGCACCATCAAGTCTATGCTCTGGATTTG TTGGGGTGGGGCAACTCAGAACGTCCAGATTTGGAGTACACCGGCAGCCTCTATGCCGAGATGATCGGGGATTTTGTCCA GCAGGTGATCGGGCGACCGTGTCACGTCATTGCCAATTCCCTCTCGGCAGGGTTTGTGCTGCGCTCGGCCCGCCTACAGC CCCACCATTGGCAGAAGCTGCTGCTCATCGCCCCTCTGGGAGACAACAGCCTCATCCCCGATTCCCTCGGGATCCCTTTG GCTCAGATTGCCTATGGATTTCTCAGCCTGCCCGTTTTGGGGTTGGCCTTCTACAACGGCATCACCGCCCCCTGGAGTGT ACGCTTGTTTACAGAGCAGAGCTTGTTCTGA
Upstream 100 bases:
>100_bases CCTACCGCCTTAAGAAAAAGTAGGTTCCCTAGCTGGGCTGCTGAGGATGAAAGAGCTGAGCCAAGTTCTCAAGATCGGGC TCTGGACTACTGTCGGCGGC
Downstream 100 bases:
>100_bases TACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATTCTGTTTGTTTCCAACCAGAATGGC GGTATCCCGCAAAGCTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MGALAVFNAWISSQTQPLQSLLPGEERHHFWRGHRLFYKVMGSGQPLLLLHGIGAGSSSYEFRAIMAELGQHHQVYALDL LGWGNSERPDLEYTGSLYAEMIGDFVQQVIGRPCHVIANSLSAGFVLRSARLQPHHWQKLLLIAPLGDNSLIPDSLGIPL AQIAYGFLSLPVLGLAFYNGITAPWSVRLFTEQSLF
Sequences:
>Translated_196_residues MGALAVFNAWISSQTQPLQSLLPGEERHHFWRGHRLFYKVMGSGQPLLLLHGIGAGSSSYEFRAIMAELGQHHQVYALDL LGWGNSERPDLEYTGSLYAEMIGDFVQQVIGRPCHVIANSLSAGFVLRSARLQPHHWQKLLLIAPLGDNSLIPDSLGIPL AQIAYGFLSLPVLGLAFYNGITAPWSVRLFTEQSLF >Mature_195_residues GALAVFNAWISSQTQPLQSLLPGEERHHFWRGHRLFYKVMGSGQPLLLLHGIGAGSSSYEFRAIMAELGQHHQVYALDLL GWGNSERPDLEYTGSLYAEMIGDFVQQVIGRPCHVIANSLSAGFVLRSARLQPHHWQKLLLIAPLGDNSLIPDSLGIPLA QIAYGFLSLPVLGLAFYNGITAPWSVRLFTEQSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 21680; Mature: 21549
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALAVFNAWISSQTQPLQSLLPGEERHHFWRGHRLFYKVMGSGQPLLLLHGIGAGSSSY CCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHEEHHHCCCCCEEEEEECCCCCCCH EFRAIMAELGQHHQVYALDLLGWGNSERPDLEYTGSLYAEMIGDFVQQVIGRPCHVIANS HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LSAGFVLRSARLQPHHWQKLLLIAPLGDNSLIPDSLGIPLAQIAYGFLSLPVLGLAFYNG HHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC ITAPWSVRLFTEQSLF CCCCEEEEEECCCCCC >Mature Secondary Structure GALAVFNAWISSQTQPLQSLLPGEERHHFWRGHRLFYKVMGSGQPLLLLHGIGAGSSSY CHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHEEHHHCCCCCEEEEEECCCCCCCH EFRAIMAELGQHHQVYALDLLGWGNSERPDLEYTGSLYAEMIGDFVQQVIGRPCHVIANS HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LSAGFVLRSARLQPHHWQKLLLIAPLGDNSLIPDSLGIPLAQIAYGFLSLPVLGLAFYNG HHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC ITAPWSVRLFTEQSLF CCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]