Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86610018

Identifier: 86610018

GI number: 86610018

Start: 2686481

End: 2687728

Strand: Direct

Name: 86610018

Synonym: CYB_2587

Alternate gene names: NA

Gene position: 2686481-2687728 (Clockwise)

Preceding gene: 86610015

Following gene: 86610021

Centisome position: 88.18

GC content: 58.89

Gene sequence:

>1248_bases
ATGCTGACACCTGTTGATCTGGAAAAACGAGTGGCTTATTTGCAGAGTCCCCAAGCCGTTCGGGATCGCTGTCGGTTGCT
ATTGGAAAGGGTTTTGGCCGGTGAATCAGAGCATTTTCGCCTCGACCTGAATCGGATGGGATCCGTAGCCGACTATGTGA
TCACCACAATGCGGGCCCACTATCCCACCGGGGAAATTCCCTTCCACAGCCGCTGGCAACATTTTCAAGTGGGATCCGGG
GAGCGCCTAGCCCGTTTGGAAAATCGACTTAAAGACATGGATCCGCTGGAGCGGCTGCGATGCAAGTGGGATCTGGCCAT
CGTCAGCGTGTTGCTGGACGCAGGCGCAGGCTCTGCCTGGAAGTACCGGGATCCAGAAAGTCAGACGGCGGTGGGTCGTT
CCGAAGGTTTGGCCTTGGCCAGTTTCGACTGGTTCTGGCAAGGTGGGTTTTCCAGCGATCCCCAGCAGCCTCTGCAGGTG
GATGCGGCGGGCCTGGAGCGGATCACCTTGGCGGATTTGGCAGCAGCTTTCCAGGTGGGGCCGGAAAATCCTTTACTGGG
ACTGGAGGGGCGCTGGCAACTGCTGCAAAGGTTGGCACAAACTTTGCGGGCTCAACCCCATTACTTTGGATCCGGTCACA
ATCTTCCTCGTCCAGGCCGGTTGTGGGACGCCATCCAGCCTGAGGATCCCAGCCGTGGGATCAAAGCAGCACAGGTCTTC
CAGGCAGTTCAGAGGGGGTTTAGCTCCATTTGGCCTGGGCGAGTCTCGCTGGCCGGGATCCCTCTGGGGGATGTCTGGCC
CTATCCCCACCTGCCCCAAACAGAGCCGGGGAGCCATTGGGTGCCTTTTCACAAGTTGTCCCAGTGGATGACCTATTCCC
TGCTGGAGCCGTTGCAGCAGGAGGGGATCCCAATCGGGGGTTTGGATGAGCTGACGGGTTTGGCGGAGTATCGCAACGGG
GGGCTGTTTGTGGATTTGGGGGTGATCCAGCTCAAGCAGCCGGAGATTGGGCAGCAACCGCATCCCCCAGATTCGACGGT
GATTGTGGAGTGGCGAGCCCTGACGGTGATTTTGCTGGATCAAGTTGCCTCCTTAATCCGGGAAAGGCTTGGCTGCTCTG
CCCAGGAGTTGCCCCTGGTGAAAATACTGCAAGGGGGAACCTGGACGGCAGGACGGCAAATCGCGGCCCAGCTCAGGCCA
GATGCTTCTCCTCCCATCCAACTGCTCAGCGATGGCACGGTGTTCTAA

Upstream 100 bases:

>100_bases
AAGTGGGCCAAGGCTTGCAGACGAATGCAGATCAAGGTGGGTTCCCGCCCGATTATGCTGAGAAAATTCTCGGCATGGAC
AATTGAGAAGGAACGGCTTG

Downstream 100 bases:

>100_bases
GAGGGGATGGGCAGGCCCCGAGTAATCCTTATGAAACTTCGCAGCAGCCGCATGGCCAGGTCGGGACGGGATCCCCAGTG
CAGATGCAGGTACGAAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLTPVDLEKRVAYLQSPQAVRDRCRLLLERVLAGESEHFRLDLNRMGSVADYVITTMRAHYPTGEIPFHSRWQHFQVGSG
ERLARLENRLKDMDPLERLRCKWDLAIVSVLLDAGAGSAWKYRDPESQTAVGRSEGLALASFDWFWQGGFSSDPQQPLQV
DAAGLERITLADLAAAFQVGPENPLLGLEGRWQLLQRLAQTLRAQPHYFGSGHNLPRPGRLWDAIQPEDPSRGIKAAQVF
QAVQRGFSSIWPGRVSLAGIPLGDVWPYPHLPQTEPGSHWVPFHKLSQWMTYSLLEPLQQEGIPIGGLDELTGLAEYRNG
GLFVDLGVIQLKQPEIGQQPHPPDSTVIVEWRALTVILLDQVASLIRERLGCSAQELPLVKILQGGTWTAGRQIAAQLRP
DASPPIQLLSDGTVF

Sequences:

>Translated_415_residues
MLTPVDLEKRVAYLQSPQAVRDRCRLLLERVLAGESEHFRLDLNRMGSVADYVITTMRAHYPTGEIPFHSRWQHFQVGSG
ERLARLENRLKDMDPLERLRCKWDLAIVSVLLDAGAGSAWKYRDPESQTAVGRSEGLALASFDWFWQGGFSSDPQQPLQV
DAAGLERITLADLAAAFQVGPENPLLGLEGRWQLLQRLAQTLRAQPHYFGSGHNLPRPGRLWDAIQPEDPSRGIKAAQVF
QAVQRGFSSIWPGRVSLAGIPLGDVWPYPHLPQTEPGSHWVPFHKLSQWMTYSLLEPLQQEGIPIGGLDELTGLAEYRNG
GLFVDLGVIQLKQPEIGQQPHPPDSTVIVEWRALTVILLDQVASLIRERLGCSAQELPLVKILQGGTWTAGRQIAAQLRP
DASPPIQLLSDGTVF
>Mature_415_residues
MLTPVDLEKRVAYLQSPQAVRDRCRLLLERVLAGESEHFRLDLNRMGSVADYVITTMRAHYPTGEIPFHSRWQHFQVGSG
ERLARLENRLKDMDPLERLRCKWDLAIVSVLLDAGAGSAWKYRDPESQTAVGRSEGLALASFDWFWQGGFSSDPQQPLQV
DAAGLERITLADLAAAFQVGPENPLLGLEGRWQLLQRLAQTLRAQPHYFGSGHNLPRPGRLWDAIQPEDPSRGIKAAQVF
QAVQRGFSSIWPGRVSLAGIPLGDVWPYPHLPQTEPGSHWVPFHKLSQWMTYSLLEPLQQEGIPIGGLDELTGLAEYRNG
GLFVDLGVIQLKQPEIGQQPHPPDSTVIVEWRALTVILLDQVASLIRERLGCSAQELPLVKILQGGTWTAGRQIAAQLRP
DASPPIQLLSDGTVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46215; Mature: 46215

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTPVDLEKRVAYLQSPQAVRDRCRLLLERVLAGESEHFRLDLNRMGSVADYVITTMRAH
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCHHHHHHHHHHHHC
YPTGEIPFHSRWQHFQVGSGERLARLENRLKDMDPLERLRCKWDLAIVSVLLDAGAGSAW
CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
KYRDPESQTAVGRSEGLALASFDWFWQGGFSSDPQQPLQVDAAGLERITLADLAAAFQVG
CCCCCCHHHHCCCCCCCEEEEEHHEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCC
PENPLLGLEGRWQLLQRLAQTLRAQPHYFGSGHNLPRPGRLWDAIQPEDPSRGIKAAQVF
CCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
QAVQRGFSSIWPGRVSLAGIPLGDVWPYPHLPQTEPGSHWVPFHKLSQWMTYSLLEPLQQ
HHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EGIPIGGLDELTGLAEYRNGGLFVDLGVIQLKQPEIGQQPHPPDSTVIVEWRALTVILLD
CCCCCCCHHHHHHHHHHCCCCEEEEECEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHH
QVASLIRERLGCSAQELPLVKILQGGTWTAGRQIAAQLRPDASPPIQLLSDGTVF
HHHHHHHHHHCCCHHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLTPVDLEKRVAYLQSPQAVRDRCRLLLERVLAGESEHFRLDLNRMGSVADYVITTMRAH
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCHHHHHHHHHHHHC
YPTGEIPFHSRWQHFQVGSGERLARLENRLKDMDPLERLRCKWDLAIVSVLLDAGAGSAW
CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
KYRDPESQTAVGRSEGLALASFDWFWQGGFSSDPQQPLQVDAAGLERITLADLAAAFQVG
CCCCCCHHHHCCCCCCCEEEEEHHEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCC
PENPLLGLEGRWQLLQRLAQTLRAQPHYFGSGHNLPRPGRLWDAIQPEDPSRGIKAAQVF
CCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
QAVQRGFSSIWPGRVSLAGIPLGDVWPYPHLPQTEPGSHWVPFHKLSQWMTYSLLEPLQQ
HHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EGIPIGGLDELTGLAEYRNGGLFVDLGVIQLKQPEIGQQPHPPDSTVIVEWRALTVILLD
CCCCCCCHHHHHHHHHHCCCCEEEEECEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHH
QVASLIRERLGCSAQELPLVKILQGGTWTAGRQIAAQLRPDASPPIQLLSDGTVF
HHHHHHHHHHCCCHHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA