| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86610002
Identifier: 86610002
GI number: 86610002
Start: 2673674
End: 2673997
Strand: Direct
Name: 86610002
Synonym: CYB_2569
Alternate gene names: NA
Gene position: 2673674-2673997 (Clockwise)
Preceding gene: 86610000
Following gene: 86610003
Centisome position: 87.76
GC content: 51.54
Gene sequence:
>324_bases ATGAGCTTCTTCGACTCTGAGATCGTCCAAGAGGAAGCCAAGCAACTGTTTCAGGATTTCCAAAACCTGATGCAGCTTGG TCAACGGTACGGCCAATTCGACCGGGAAGGCAAAAAAATCTTCATCGAGCAGATGGAGGAGTTGCTGGAGCGCCAGCGCA TTTTCATGAAGCGGCTGGAACTCTCCGACGACTTTATGGCTCAAATGACCATCAAACAACTGCAAACTCAGCTTGGGGGG TTTGGGCTCTCCCTGACCCAAATGTTTGACCAGATGCACCAGACCCTAGAGCGCATGAAAGCTGAGGCAGACGCTGAGCG TTGA
Upstream 100 bases:
>100_bases GGATCCCGTACTCGCAGGAGGGGTTGCCTCCTGCTGAGGCAATCGGATTCGGATAGGATGGGTATACCCAATGCAGTTTA TTCAGGGCAAACGGAAGGCC
Downstream 100 bases:
>100_bases CCCCCAAGAACGACCTACACGAAGGATCATGTCTTCTTCCCGCCAGACCCGCAACCAGAAATTGATTCTGGAGGTGCTAG AGCAGCAGTCGCAGCCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSFFDSEIVQEEAKQLFQDFQNLMQLGQRYGQFDREGKKIFIEQMEELLERQRIFMKRLELSDDFMAQMTIKQLQTQLGG FGLSLTQMFDQMHQTLERMKAEADAER
Sequences:
>Translated_107_residues MSFFDSEIVQEEAKQLFQDFQNLMQLGQRYGQFDREGKKIFIEQMEELLERQRIFMKRLELSDDFMAQMTIKQLQTQLGG FGLSLTQMFDQMHQTLERMKAEADAER >Mature_106_residues SFFDSEIVQEEAKQLFQDFQNLMQLGQRYGQFDREGKKIFIEQMEELLERQRIFMKRLELSDDFMAQMTIKQLQTQLGGF GLSLTQMFDQMHQTLERMKAEADAER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12826; Mature: 12695
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.4 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFDSEIVQEEAKQLFQDFQNLMQLGQRYGQFDREGKKIFIEQMEELLERQRIFMKRLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSDDFMAQMTIKQLQTQLGGFGLSLTQMFDQMHQTLERMKAEADAER CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SFFDSEIVQEEAKQLFQDFQNLMQLGQRYGQFDREGKKIFIEQMEELLERQRIFMKRLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSDDFMAQMTIKQLQTQLGGFGLSLTQMFDQMHQTLERMKAEADAER CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA