Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609977

Identifier: 86609977

GI number: 86609977

Start: 2649088

End: 2649894

Strand: Direct

Name: 86609977

Synonym: CYB_2543

Alternate gene names: NA

Gene position: 2649088-2649894 (Clockwise)

Preceding gene: 86609976

Following gene: 86609978

Centisome position: 86.95

GC content: 59.73

Gene sequence:

>807_bases
ATGTTGAGCTGGTATCGTTCTTGCGCATCTCCTCGCCGTTGGGGATCCCGTTTGACTCTGGCTCTGGTGGCATTGGGGTT
GGCCGGCGGCTGTCGGCTGCTGGATCGGGTGGGAGAGAGAGGCTTGCCGGTGGGATCTGCGCTGACCCGTTCTGCTCTGT
GGAGAGGCAGCCAAACCGTGGCGGGAGCGCTGGAGGTGGGAGATCAAGTCAGCCGCCAGTACGGCAGCTTTTGGGATGGG
ATCCCCGTCACCGCTGAGCCGGGACAGATTTTGATTGCGGCCCTAGAGAGCGAAGATTTTGATGCTTATCTGGAGCTGGT
GGACGGTCAAGGGCGGGTGATTGGCTTTGACGATGACTCTGGCCTGGATGTGAATGCCCTGTTGGCAGTGCGTCTGCCGG
AGGGAGGCACCTATACCCTGCGGGCCACCAGCTTTGAGCCGGAATCCACCGGCAACTACCGGCTCACCTATATCCTCACC
CAGGTAGATTGGCAGGAAAGCCTATCGGGCCGTCTGCAGGAGGGATCCCTTCAGCATCCCGAGGATGGCAGTTGGATGGA
CGAATATCCCATTGCCGCCCGCGCCGGCCAGATCCTGATCGCTTCCATGACCAGCTCCGATTTCGATGCCTTTTTGCAGC
TGCTGGATCCCAGTGGAGAAGTCAGGGCTTGGGATGATGACCAAGGGGGTGGAACCGATGCTCTGATGATTGCCTTTCTG
CCCCGCACCGGCACTTATACCCTGCGGGCCAACACCCATAAGCCACGAGAAGAAGGAGCCTATAGGTTACAGTACGCCTT
GCGCTAG

Upstream 100 bases:

>100_bases
TAGGCCAACAGTTTGCTCTCGGCTGACCAACTTTTCGCTCAATCAATCAGGGGGTAGGATCAGTCTACAGTTGCCATTCT
TTAGAAAGGGATCCCTTCCG

Downstream 100 bases:

>100_bases
CCCCTGCTCGCCCAGATTCCCTGTCTTACAGCTTGGATAAGGGGGCTTGTGAACCTTCTGATGCTGATGTCGAGATTTTG
ACAGGAATCATCGTTTTTTA

Product: pre-peptidase C-terminal domain-containing protein

Products: NA

Alternate protein names: Pre-Peptidase C-Terminal Domain-Containing Protein; Peptidase; Serralysin; Peptidase-Like

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTVAGALEVGDQVSRQYGSFWDG
IPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDSGLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILT
QVDWQESLSGRLQEGSLQHPEDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL
PRTGTYTLRANTHKPREEGAYRLQYALR

Sequences:

>Translated_268_residues
MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTVAGALEVGDQVSRQYGSFWDG
IPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDSGLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILT
QVDWQESLSGRLQEGSLQHPEDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL
PRTGTYTLRANTHKPREEGAYRLQYALR
>Mature_268_residues
MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTVAGALEVGDQVSRQYGSFWDG
IPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDSGLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILT
QVDWQESLSGRLQEGSLQHPEDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL
PRTGTYTLRANTHKPREEGAYRLQYALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29271; Mature: 29271

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTV
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH
AGALEVGDQVSRQYGSFWDGIPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEHEEECCCCCEEEECCCC
GLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILTQVDWQESLSGRLQEGSLQHP
CCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCCCCC
EDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL
CCCCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE
PRTGTYTLRANTHKPREEGAYRLQYALR
CCCCEEEEEECCCCCHHCCCEEEEEECC
>Mature Secondary Structure
MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTV
CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH
AGALEVGDQVSRQYGSFWDGIPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEHEEECCCCCEEEECCCC
GLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILTQVDWQESLSGRLQEGSLQHP
CCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCCCCC
EDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL
CCCCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE
PRTGTYTLRANTHKPREEGAYRLQYALR
CCCCEEEEEECCCCCHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA