| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609977
Identifier: 86609977
GI number: 86609977
Start: 2649088
End: 2649894
Strand: Direct
Name: 86609977
Synonym: CYB_2543
Alternate gene names: NA
Gene position: 2649088-2649894 (Clockwise)
Preceding gene: 86609976
Following gene: 86609978
Centisome position: 86.95
GC content: 59.73
Gene sequence:
>807_bases ATGTTGAGCTGGTATCGTTCTTGCGCATCTCCTCGCCGTTGGGGATCCCGTTTGACTCTGGCTCTGGTGGCATTGGGGTT GGCCGGCGGCTGTCGGCTGCTGGATCGGGTGGGAGAGAGAGGCTTGCCGGTGGGATCTGCGCTGACCCGTTCTGCTCTGT GGAGAGGCAGCCAAACCGTGGCGGGAGCGCTGGAGGTGGGAGATCAAGTCAGCCGCCAGTACGGCAGCTTTTGGGATGGG ATCCCCGTCACCGCTGAGCCGGGACAGATTTTGATTGCGGCCCTAGAGAGCGAAGATTTTGATGCTTATCTGGAGCTGGT GGACGGTCAAGGGCGGGTGATTGGCTTTGACGATGACTCTGGCCTGGATGTGAATGCCCTGTTGGCAGTGCGTCTGCCGG AGGGAGGCACCTATACCCTGCGGGCCACCAGCTTTGAGCCGGAATCCACCGGCAACTACCGGCTCACCTATATCCTCACC CAGGTAGATTGGCAGGAAAGCCTATCGGGCCGTCTGCAGGAGGGATCCCTTCAGCATCCCGAGGATGGCAGTTGGATGGA CGAATATCCCATTGCCGCCCGCGCCGGCCAGATCCTGATCGCTTCCATGACCAGCTCCGATTTCGATGCCTTTTTGCAGC TGCTGGATCCCAGTGGAGAAGTCAGGGCTTGGGATGATGACCAAGGGGGTGGAACCGATGCTCTGATGATTGCCTTTCTG CCCCGCACCGGCACTTATACCCTGCGGGCCAACACCCATAAGCCACGAGAAGAAGGAGCCTATAGGTTACAGTACGCCTT GCGCTAG
Upstream 100 bases:
>100_bases TAGGCCAACAGTTTGCTCTCGGCTGACCAACTTTTCGCTCAATCAATCAGGGGGTAGGATCAGTCTACAGTTGCCATTCT TTAGAAAGGGATCCCTTCCG
Downstream 100 bases:
>100_bases CCCCTGCTCGCCCAGATTCCCTGTCTTACAGCTTGGATAAGGGGGCTTGTGAACCTTCTGATGCTGATGTCGAGATTTTG ACAGGAATCATCGTTTTTTA
Product: pre-peptidase C-terminal domain-containing protein
Products: NA
Alternate protein names: Pre-Peptidase C-Terminal Domain-Containing Protein; Peptidase; Serralysin; Peptidase-Like
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTVAGALEVGDQVSRQYGSFWDG IPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDSGLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILT QVDWQESLSGRLQEGSLQHPEDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL PRTGTYTLRANTHKPREEGAYRLQYALR
Sequences:
>Translated_268_residues MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTVAGALEVGDQVSRQYGSFWDG IPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDSGLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILT QVDWQESLSGRLQEGSLQHPEDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL PRTGTYTLRANTHKPREEGAYRLQYALR >Mature_268_residues MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTVAGALEVGDQVSRQYGSFWDG IPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDSGLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILT QVDWQESLSGRLQEGSLQHPEDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL PRTGTYTLRANTHKPREEGAYRLQYALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29271; Mature: 29271
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTV CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH AGALEVGDQVSRQYGSFWDGIPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDS HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEHEEECCCCCEEEECCCC GLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILTQVDWQESLSGRLQEGSLQHP CCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCCCCC EDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL CCCCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE PRTGTYTLRANTHKPREEGAYRLQYALR CCCCEEEEEECCCCCHHCCCEEEEEECC >Mature Secondary Structure MLSWYRSCASPRRWGSRLTLALVALGLAGGCRLLDRVGERGLPVGSALTRSALWRGSQTV CCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH AGALEVGDQVSRQYGSFWDGIPVTAEPGQILIAALESEDFDAYLELVDGQGRVIGFDDDS HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEHEEECCCCCEEEECCCC GLDVNALLAVRLPEGGTYTLRATSFEPESTGNYRLTYILTQVDWQESLSGRLQEGSLQHP CCCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHCCCCCCCCCCCC EDGSWMDEYPIAARAGQILIASMTSSDFDAFLQLLDPSGEVRAWDDDQGGGTDALMIAFL CCCCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEE PRTGTYTLRANTHKPREEGAYRLQYALR CCCCEEEEEECCCCCHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA