| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is napA [C]
Identifier: 86609950
GI number: 86609950
Start: 2611355
End: 2613433
Strand: Direct
Name: napA [C]
Synonym: CYB_2516
Alternate gene names: 86609950
Gene position: 2611355-2613433 (Clockwise)
Preceding gene: 86609948
Following gene: 86609951
Centisome position: 85.71
GC content: 60.94
Gene sequence:
>2079_bases ATGCTGGCTAACTGGCTGCAAATTTCGGGGATCCCTCTAGCCCTGATCGGCCCTGTTGAGAATCCGGTGCTGGTGTTTTT GATCATCCTGACCATCATGCTGGTGGCTCCCTTGCTATTTGAGCGGCTGCGCCTGCCGGGGATCATCGGGTTAATCTTGG CTGGGCTGGTGGTGGGGCCCTACGGCTTGGGCATCTTGCGGCGGGACGAGACCATCATCCTGCTGGGCACGGTGGGGCTG TTGTTTCTCATGTTCATGGCGGGGCTGGAGACCAGTCTGGAAGATTTGAAGCTCAATGCCGGGAAGGCCACCCTCTTCGG GGCGCTCACCTTTCTGTTGCCCATGCTCATCGGCACAGCAGCCATGTTGGCCATTGGGTATGGCTTTCTGGCGGCGGTGC TGGTGGCCTCTTGTTTTGCCTCTCACACCCTGATCGGTCTGCCCATCATCTCGAAGCTGGGGTTGATGCGCCTGCAGACG GTGACGGCAACTTTGGGGGCCACCCTTATCACGAATGTCCTGGCTTTGTTGGTGCTGGCGGTGGTGGTGCGCGCCCACCA AGGGGAGCTGTCGCTGCGCTTTTGGCTGACGTTGATCCCTTCCATTGCCCTCTACACCTTTGCCACCCTGTGGGGGGTGC CTAAGCTGGGCAGTTGGTTCTTTCAACGCTTTGGTCACGACGAGGGAGCAGAGTTTACTTTCGTGATCGCCACTTTGTTT GTGGTGGCCTACGGAGCGGGGTTGATCGGCATTGAGCCGGTGGTGGGAGCCTTTCTGGCCGGGACGGCCATCACCCCTAT CATCCCCCAGCTCAGCCCCCTGATGAACCGGATTCAGTTTATCGGCAACACCCTGTTTGTGCCTTTCTTCTTGATCTCGG TGGGGATGCTGATCAATCCCGGTATTCTCTTGGGGGAGCCGCGCACGCTGCTGGTGGGCGGAGTGATGATCGCAGCGGAG GTGGTGAGCAAGTTTCTGGCCGCTTGGATCCCGGCCCAACTGTTTGGCTGGCGCTTTGCCAGCACGATGATCATGTTCGG TTTGTCGATGGCTCAGGCGGCGGCTACCCTGGCGGCGATCACGGTGGCCTTTCAGGTGGAGTTGGTGGATGAGCTGACGG TGAACGGCACCATTGCCATGATCCTCGTGACCTGTGTTGCCTCGCCTTGGATTGTGGCCCGCTGGGGAGAGCAAATGCAG CCCACCGAGGTGGCCGCAGAGTCCACCGAATTGCCCAAGCCGGATTGGGGAGCTCGCGTCTTGGTGCCGGTGGCCAACCC GGATACCGAAAGCAACCTGCTGCAGTTGGCGTTGATTTTGGCCAAAAAAGATGGGGGAACGCTGCTGCCGCTGCATGTTT TGTCTGACCGTGCTGGGATCTCGCCGGCAGCCCTGGCTCGGCAAGAGCAGTTGTTGACCTTTGCAGAAGCTCTGGCCCAC AGCGCCGTGACCCGAGTGGAGCCGATTCGGCGGGTGGATGACTCGGTGGAAAAAGGGATCATTCGCTCGGCGGCGGAACG GCAGGCAACCTTGGTGATCCTGGGCTGGAAGGGCTACTCCACCTATGCGGAGAACTTTTTCGGCAGCATCATCGACGCGG TGGTGCGGCAGGTGGGGATCCCAGTCTTGATTACGCGGTTTCCGGTACCCATCGAGACGGCGCGCCGCATCCTCTTGGTT GCACCGGAGCCGGAGGTCTCTCCCGGATCCCTGCAGCAGACCATTGGGCTGGCGCAAACGCTGGCCGGCGAATTGAAAGC GGGTTTGCAGATCCTGCTGGTGCAAACCCGACCTGGGCGGAAAAGCTCCCCAGCCTTGCCGGCAGAAAGCTATGCTCACC TGCCGGTTCAGCGGGTGCAGGGGGGGGTGGTGGCGGAAGCCTTCAAAGCGCTGCAGCCAGGAGATGTGTTGGTATTGGTT CCCAGCGAAACCGGCAACCGGTCGCGTCTGGGCCGAGAGCCGGAGACCATCGCCCGCAACCGACCCAGCCTTCCCATCAT CGTGGTGCATTTGCCACGGGATTCAGCTCATCCCTTGCGCCAAGGAGATGGGGTTCTGGCGGCCGCAGAGCCCACTTGA
Upstream 100 bases:
>100_bases AGTCTGTGGGGCATCGAGAGCTACTTGGATCTGGAGGGATCTGATAGACTCATGCGGGCGCTTTGCCGGGTCTGTTCATT AGCTGTCTGTCGGGTGATTT
Downstream 100 bases:
>100_bases CAGGGATGGCATTGGGGTGTTGTCTGGCGGACTGGAGCTCTTGTCTCAACGACGCCCCGGCTCCCCTGGTAAACTGGGAT ACCCCAGGTTCGGAGCAGTC
Product: monovalent cation:proton antiporter-2 (CPA2) family protein
Products: NA
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MLANWLQISGIPLALIGPVENPVLVFLIILTIMLVAPLLFERLRLPGIIGLILAGLVVGPYGLGILRRDETIILLGTVGL LFLMFMAGLETSLEDLKLNAGKATLFGALTFLLPMLIGTAAMLAIGYGFLAAVLVASCFASHTLIGLPIISKLGLMRLQT VTATLGATLITNVLALLVLAVVVRAHQGELSLRFWLTLIPSIALYTFATLWGVPKLGSWFFQRFGHDEGAEFTFVIATLF VVAYGAGLIGIEPVVGAFLAGTAITPIIPQLSPLMNRIQFIGNTLFVPFFLISVGMLINPGILLGEPRTLLVGGVMIAAE VVSKFLAAWIPAQLFGWRFASTMIMFGLSMAQAAATLAAITVAFQVELVDELTVNGTIAMILVTCVASPWIVARWGEQMQ PTEVAAESTELPKPDWGARVLVPVANPDTESNLLQLALILAKKDGGTLLPLHVLSDRAGISPAALARQEQLLTFAEALAH SAVTRVEPIRRVDDSVEKGIIRSAAERQATLVILGWKGYSTYAENFFGSIIDAVVRQVGIPVLITRFPVPIETARRILLV APEPEVSPGSLQQTIGLAQTLAGELKAGLQILLVQTRPGRKSSPALPAESYAHLPVQRVQGGVVAEAFKALQPGDVLVLV PSETGNRSRLGREPETIARNRPSLPIIVVHLPRDSAHPLRQGDGVLAAAEPT
Sequences:
>Translated_692_residues MLANWLQISGIPLALIGPVENPVLVFLIILTIMLVAPLLFERLRLPGIIGLILAGLVVGPYGLGILRRDETIILLGTVGL LFLMFMAGLETSLEDLKLNAGKATLFGALTFLLPMLIGTAAMLAIGYGFLAAVLVASCFASHTLIGLPIISKLGLMRLQT VTATLGATLITNVLALLVLAVVVRAHQGELSLRFWLTLIPSIALYTFATLWGVPKLGSWFFQRFGHDEGAEFTFVIATLF VVAYGAGLIGIEPVVGAFLAGTAITPIIPQLSPLMNRIQFIGNTLFVPFFLISVGMLINPGILLGEPRTLLVGGVMIAAE VVSKFLAAWIPAQLFGWRFASTMIMFGLSMAQAAATLAAITVAFQVELVDELTVNGTIAMILVTCVASPWIVARWGEQMQ PTEVAAESTELPKPDWGARVLVPVANPDTESNLLQLALILAKKDGGTLLPLHVLSDRAGISPAALARQEQLLTFAEALAH SAVTRVEPIRRVDDSVEKGIIRSAAERQATLVILGWKGYSTYAENFFGSIIDAVVRQVGIPVLITRFPVPIETARRILLV APEPEVSPGSLQQTIGLAQTLAGELKAGLQILLVQTRPGRKSSPALPAESYAHLPVQRVQGGVVAEAFKALQPGDVLVLV PSETGNRSRLGREPETIARNRPSLPIIVVHLPRDSAHPLRQGDGVLAAAEPT >Mature_692_residues MLANWLQISGIPLALIGPVENPVLVFLIILTIMLVAPLLFERLRLPGIIGLILAGLVVGPYGLGILRRDETIILLGTVGL LFLMFMAGLETSLEDLKLNAGKATLFGALTFLLPMLIGTAAMLAIGYGFLAAVLVASCFASHTLIGLPIISKLGLMRLQT VTATLGATLITNVLALLVLAVVVRAHQGELSLRFWLTLIPSIALYTFATLWGVPKLGSWFFQRFGHDEGAEFTFVIATLF VVAYGAGLIGIEPVVGAFLAGTAITPIIPQLSPLMNRIQFIGNTLFVPFFLISVGMLINPGILLGEPRTLLVGGVMIAAE VVSKFLAAWIPAQLFGWRFASTMIMFGLSMAQAAATLAAITVAFQVELVDELTVNGTIAMILVTCVASPWIVARWGEQMQ PTEVAAESTELPKPDWGARVLVPVANPDTESNLLQLALILAKKDGGTLLPLHVLSDRAGISPAALARQEQLLTFAEALAH SAVTRVEPIRRVDDSVEKGIIRSAAERQATLVILGWKGYSTYAENFFGSIIDAVVRQVGIPVLITRFPVPIETARRILLV APEPEVSPGSLQQTIGLAQTLAGELKAGLQILLVQTRPGRKSSPALPAESYAHLPVQRVQGGVVAEAFKALQPGDVLVLV PSETGNRSRLGREPETIARNRPSLPIIVVHLPRDSAHPLRQGDGVLAAAEPT
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=360, Percent_Identity=23.0555555555556, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 73828; Mature: 73828
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANWLQISGIPLALIGPVENPVLVFLIILTIMLVAPLLFERLRLPGIIGLILAGLVVGP CCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YGLGILRRDETIILLGTVGLLFLMFMAGLETSLEDLKLNAGKATLFGALTFLLPMLIGTA CCCCEEECCCEEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH AMLAIGYGFLAAVLVASCFASHTLIGLPIISKLGLMRLQTVTATLGATLITNVLALLVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVRAHQGELSLRFWLTLIPSIALYTFATLWGVPKLGSWFFQRFGHDEGAEFTFVIATLF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHH VVAYGAGLIGIEPVVGAFLAGTAITPIIPQLSPLMNRIQFIGNTLFVPFFLISVGMLINP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GILLGEPRTLLVGGVMIAAEVVSKFLAAWIPAQLFGWRFASTMIMFGLSMAQAAATLAAI CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVAFQVELVDELTVNGTIAMILVTCVASPWIVARWGEQMQPTEVAAESTELPKPDWGARV HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCEE LVPVANPDTESNLLQLALILAKKDGGTLLPLHVLSDRAGISPAALARQEQLLTFAEALAH EEEECCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH SAVTRVEPIRRVDDSVEKGIIRSAAERQATLVILGWKGYSTYAENFFGSIIDAVVRQVGI HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PVLITRFPVPIETARRILLVAPEPEVSPGSLQQTIGLAQTLAGELKAGLQILLVQTRPGR CEEEECCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC KSSPALPAESYAHLPVQRVQGGVVAEAFKALQPGDVLVLVPSETGNRSRLGREPETIARN CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCHHHHCC RPSLPIIVVHLPRDSAHPLRQGDGVLAAAEPT CCCCCEEEEECCCCCCCCCCCCCCEEEECCCC >Mature Secondary Structure MLANWLQISGIPLALIGPVENPVLVFLIILTIMLVAPLLFERLRLPGIIGLILAGLVVGP CCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YGLGILRRDETIILLGTVGLLFLMFMAGLETSLEDLKLNAGKATLFGALTFLLPMLIGTA CCCCEEECCCEEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH AMLAIGYGFLAAVLVASCFASHTLIGLPIISKLGLMRLQTVTATLGATLITNVLALLVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVVRAHQGELSLRFWLTLIPSIALYTFATLWGVPKLGSWFFQRFGHDEGAEFTFVIATLF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHH VVAYGAGLIGIEPVVGAFLAGTAITPIIPQLSPLMNRIQFIGNTLFVPFFLISVGMLINP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GILLGEPRTLLVGGVMIAAEVVSKFLAAWIPAQLFGWRFASTMIMFGLSMAQAAATLAAI CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVAFQVELVDELTVNGTIAMILVTCVASPWIVARWGEQMQPTEVAAESTELPKPDWGARV HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCEE LVPVANPDTESNLLQLALILAKKDGGTLLPLHVLSDRAGISPAALARQEQLLTFAEALAH EEEECCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH SAVTRVEPIRRVDDSVEKGIIRSAAERQATLVILGWKGYSTYAENFFGSIIDAVVRQVGI HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PVLITRFPVPIETARRILLVAPEPEVSPGSLQQTIGLAQTLAGELKAGLQILLVQTRPGR CEEEECCCCCHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC KSSPALPAESYAHLPVQRVQGGVVAEAFKALQPGDVLVLVPSETGNRSRLGREPETIARN CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCHHHHCC RPSLPIIVVHLPRDSAHPLRQGDGVLAAAEPT CCCCCEEEEECCCCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]