| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609920
Identifier: 86609920
GI number: 86609920
Start: 2582597
End: 2583430
Strand: Direct
Name: 86609920
Synonym: CYB_2486
Alternate gene names: NA
Gene position: 2582597-2583430 (Clockwise)
Preceding gene: 86609919
Following gene: 86609921
Centisome position: 84.77
GC content: 62.95
Gene sequence:
>834_bases ATGGGGGGCTGGCTCAGGCAAAACTGGCTGTGGCAACTGGGGAGAGCCCTTGTGGCTGTTTGGATCGGCTGGGCGGAGGG GAGCGCTGCCTGGGCGAGGGACATGGCGCCGGCTGCCCCTGGAGTCTCCTCTCCCCCTACTTTGCCCATCCCTTGGGAAT GGGTGTACGACTTGCAGGAGCAAGCCCGGCAGCGGCAATGCACATTGGTTGGCCTGTTGCGCAGCGATCCCTTGCCGGCG CCGGATCCCCAGTGGCAGGTGTACACACGGCTAGATTTGGTGGCCACGCCTCAGGCTGGTCGGTTGACCAGTGTGTTGTT TGCCGAGAACACCCGTACTCGGGCCTTGCAGGTTATCTATCAAGCCTCAGGGTCGGTATACGACCCCGTTGAGGCATTGG ATTTTGCCATGATCCTGCCTCTAGCCTGGCAGGGGAACACTTTGCTGGCGCGGGAGTACGAAGGCTGGTTCCAGACCGAT TTGAGCTGGGATCGGGCGGTGGTCTGGCCTTTGCCCACTGGCTCGACAGGGATCCCACCGGTGCAAATCTGGGATCCGCC GCCGGCGCTGGGGTATGCTGAGCTGCTGGGCTGGGATCCCCAGGCGCGAGAGCGGGTGCTGTTTGCGGTGGCCGATAGCC TTGGAGAGATGCCCCGCTTGGTGAGCGTGGGCCCAGACCGCCAGGTGTTGCTGCGAGCGCCTGCCGTTGCCCTTTCCCCA ACTCCCTCTTCTCTACAGGGGTGGCAGGAGATCCGGCCCAAGGGGGGAGAGCCTCTCTGCCACCAAAGCCGTTTTGGGCT GGAGCAGGGAGGGGAAAATGAAAAATTAAACTGA
Upstream 100 bases:
>100_bases GTAGTCCTCAAGCGCAGGAAACGTCCTTTTCGCGCTAGCGGCGCGGAGCGCTTTGCATCAGCATGAGTGCGGGAGTATGT CACGACGGAAGGTGAGGCAG
Downstream 100 bases:
>100_bases GATGCAGAAGCCTGTGGGAGCGACAACCATGTCCAAACCGGTGGTGCGGCGGGGCTGGCCTCTGGAGGCCTTTGTCGGGG ATGTAATCGTCTGTACCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQEQARQRQCTLVGLLRSDPLPA PDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIYQASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTD LSWDRAVVWPLPTGSTGIPPVQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN
Sequences:
>Translated_277_residues MGGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQEQARQRQCTLVGLLRSDPLPA PDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIYQASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTD LSWDRAVVWPLPTGSTGIPPVQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN >Mature_276_residues GGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQEQARQRQCTLVGLLRSDPLPAP DPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIYQASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTDL SWDRAVVWPLPTGSTGIPPVQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSPT PSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30718; Mature: 30587
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQE CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH QARQRQCTLVGLLRSDPLPAPDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIY HHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHH QASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTDLSWDRAVVWPLPTGSTGIPP HHCCCCCCHHHHHHHHHHEEEECCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCCCCE VQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP EEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEECC TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN CCHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCCC >Mature Secondary Structure GGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQE CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH QARQRQCTLVGLLRSDPLPAPDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIY HHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHH QASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTDLSWDRAVVWPLPTGSTGIPP HHCCCCCCHHHHHHHHHHEEEECCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCCCCE VQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP EEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEECC TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN CCHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA