Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609920

Identifier: 86609920

GI number: 86609920

Start: 2582597

End: 2583430

Strand: Direct

Name: 86609920

Synonym: CYB_2486

Alternate gene names: NA

Gene position: 2582597-2583430 (Clockwise)

Preceding gene: 86609919

Following gene: 86609921

Centisome position: 84.77

GC content: 62.95

Gene sequence:

>834_bases
ATGGGGGGCTGGCTCAGGCAAAACTGGCTGTGGCAACTGGGGAGAGCCCTTGTGGCTGTTTGGATCGGCTGGGCGGAGGG
GAGCGCTGCCTGGGCGAGGGACATGGCGCCGGCTGCCCCTGGAGTCTCCTCTCCCCCTACTTTGCCCATCCCTTGGGAAT
GGGTGTACGACTTGCAGGAGCAAGCCCGGCAGCGGCAATGCACATTGGTTGGCCTGTTGCGCAGCGATCCCTTGCCGGCG
CCGGATCCCCAGTGGCAGGTGTACACACGGCTAGATTTGGTGGCCACGCCTCAGGCTGGTCGGTTGACCAGTGTGTTGTT
TGCCGAGAACACCCGTACTCGGGCCTTGCAGGTTATCTATCAAGCCTCAGGGTCGGTATACGACCCCGTTGAGGCATTGG
ATTTTGCCATGATCCTGCCTCTAGCCTGGCAGGGGAACACTTTGCTGGCGCGGGAGTACGAAGGCTGGTTCCAGACCGAT
TTGAGCTGGGATCGGGCGGTGGTCTGGCCTTTGCCCACTGGCTCGACAGGGATCCCACCGGTGCAAATCTGGGATCCGCC
GCCGGCGCTGGGGTATGCTGAGCTGCTGGGCTGGGATCCCCAGGCGCGAGAGCGGGTGCTGTTTGCGGTGGCCGATAGCC
TTGGAGAGATGCCCCGCTTGGTGAGCGTGGGCCCAGACCGCCAGGTGTTGCTGCGAGCGCCTGCCGTTGCCCTTTCCCCA
ACTCCCTCTTCTCTACAGGGGTGGCAGGAGATCCGGCCCAAGGGGGGAGAGCCTCTCTGCCACCAAAGCCGTTTTGGGCT
GGAGCAGGGAGGGGAAAATGAAAAATTAAACTGA

Upstream 100 bases:

>100_bases
GTAGTCCTCAAGCGCAGGAAACGTCCTTTTCGCGCTAGCGGCGCGGAGCGCTTTGCATCAGCATGAGTGCGGGAGTATGT
CACGACGGAAGGTGAGGCAG

Downstream 100 bases:

>100_bases
GATGCAGAAGCCTGTGGGAGCGACAACCATGTCCAAACCGGTGGTGCGGCGGGGCTGGCCTCTGGAGGCCTTTGTCGGGG
ATGTAATCGTCTGTACCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MGGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQEQARQRQCTLVGLLRSDPLPA
PDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIYQASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTD
LSWDRAVVWPLPTGSTGIPPVQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP
TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN

Sequences:

>Translated_277_residues
MGGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQEQARQRQCTLVGLLRSDPLPA
PDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIYQASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTD
LSWDRAVVWPLPTGSTGIPPVQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP
TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN
>Mature_276_residues
GGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQEQARQRQCTLVGLLRSDPLPAP
DPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIYQASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTDL
SWDRAVVWPLPTGSTGIPPVQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSPT
PSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30718; Mature: 30587

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
QARQRQCTLVGLLRSDPLPAPDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIY
HHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHH
QASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTDLSWDRAVVWPLPTGSTGIPP
HHCCCCCCHHHHHHHHHHEEEECCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCCCCE
VQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP
EEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEECC
TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN
CCHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCCC
>Mature Secondary Structure 
GGWLRQNWLWQLGRALVAVWIGWAEGSAAWARDMAPAAPGVSSPPTLPIPWEWVYDLQE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
QARQRQCTLVGLLRSDPLPAPDPQWQVYTRLDLVATPQAGRLTSVLFAENTRTRALQVIY
HHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHH
QASGSVYDPVEALDFAMILPLAWQGNTLLAREYEGWFQTDLSWDRAVVWPLPTGSTGIPP
HHCCCCCCHHHHHHHHHHEEEECCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCCCCE
VQIWDPPPALGYAELLGWDPQARERVLFAVADSLGEMPRLVSVGPDRQVLLRAPAVALSP
EEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCEEEECC
TPSSLQGWQEIRPKGGEPLCHQSRFGLEQGGENEKLN
CCHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA