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The map label for this gene is nrtD [H]

Identifier: 86609881

GI number: 86609881

Start: 2546845

End: 2547306

Strand: Direct

Name: nrtD [H]

Synonym: CYB_2446

Alternate gene names: 86609881

Gene position: 2546845-2547306 (Clockwise)

Preceding gene: 86609880

Following gene: 86609886

Centisome position: 83.59

GC content: 57.58

Gene sequence:

>462_bases
ATGACTTCTTCTCCCCAGATATCGTCAGATATCGTCGGTCTAGAGCGTTTTGCTAAGGCCCTGCCCAGGCAACTTTCGGG
CGGTATGCAGCAGCGGGTGGCCATTGCCCGAGCTCTGGCGGCCCAGCCGAAGATTTTGCTCATGGATGAGCCTTTTGGCG
CTTTGGACGTGCAAACCAAGGAGACGATGCAGGAGTTTTTGCTGGATCTCTGGCAGCGCACGCGCACCTCAATTTTGATG
ATTACCCACGATGTGGAAGAGGCCGTCTTTCTGGCCCAGCGCATCTATGTACTCACGTCCCATCCTGGGCGGGTGAAACG
GGAGCTCCGGGTTGATTTCCCCAGTCGGCGCGACTACAGTCTCAAGCGCACTTCTTCCTTCCAAGAGGTGAAGGACGAGA
TCTTGGCTCTCCTGCGAGAACAGAAAGGGATCCCGTTGAGCGACGCTGCGCCCGCGGGCTGA

Upstream 100 bases:

>100_bases
AACTTAACTATTTGCTGCTTACCTCAACCCGACTCCAGAATCTGGGCCAGCGAACAGCTGTTCTCAAGCTGGCTGCACAG
TTACCTGAACTTCAGGGCTT

Downstream 100 bases:

>100_bases
TCAGGCAAACACCACTGTTTTGTTGTGGTACACCAGCACCCGATTCTCCAGGTGATACCGCACTGCCCGTGCCAGGACTA
GGCGTTCCATGTCGCGGCCT

Product: ABC transporter, ATP-binding protein, truncation

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTSSPQISSDIVGLERFAKALPRQLSGGMQQRVAIARALAAQPKILLMDEPFGALDVQTKETMQEFLLDLWQRTRTSILM
ITHDVEEAVFLAQRIYVLTSHPGRVKRELRVDFPSRRDYSLKRTSSFQEVKDEILALLREQKGIPLSDAAPAG

Sequences:

>Translated_153_residues
MTSSPQISSDIVGLERFAKALPRQLSGGMQQRVAIARALAAQPKILLMDEPFGALDVQTKETMQEFLLDLWQRTRTSILM
ITHDVEEAVFLAQRIYVLTSHPGRVKRELRVDFPSRRDYSLKRTSSFQEVKDEILALLREQKGIPLSDAAPAG
>Mature_152_residues
TSSPQISSDIVGLERFAKALPRQLSGGMQQRVAIARALAAQPKILLMDEPFGALDVQTKETMQEFLLDLWQRTRTSILMI
THDVEEAVFLAQRIYVLTSHPGRVKRELRVDFPSRRDYSLKRTSSFQEVKDEILALLREQKGIPLSDAAPAG

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG1116

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1786563, Length=136, Percent_Identity=48.5294117647059, Blast_Score=122, Evalue=9e-30,
Organism=Escherichia coli, GI1787164, Length=124, Percent_Identity=43.5483870967742, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI87081791, Length=89, Percent_Identity=48.314606741573, Blast_Score=92, Evalue=1e-20,
Organism=Escherichia coli, GI1789032, Length=89, Percent_Identity=47.1910112359551, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1788761, Length=90, Percent_Identity=46.6666666666667, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788450, Length=92, Percent_Identity=47.8260869565217, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1787370, Length=98, Percent_Identity=43.8775510204082, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787712, Length=106, Percent_Identity=43.3962264150943, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1789963, Length=79, Percent_Identity=45.5696202531646, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786703, Length=77, Percent_Identity=45.4545454545455, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1786398, Length=90, Percent_Identity=42.2222222222222, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI87082267, Length=93, Percent_Identity=40.8602150537634, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1786253, Length=94, Percent_Identity=39.3617021276596, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI87081834, Length=99, Percent_Identity=41.4141414141414, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1786319, Length=76, Percent_Identity=43.421052631579, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI48994997, Length=78, Percent_Identity=42.3076923076923, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI87081709, Length=89, Percent_Identity=39.3258426966292, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1787029, Length=94, Percent_Identity=41.4893617021277, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=80, Percent_Identity=41.25, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1789873, Length=87, Percent_Identity=44.8275862068966, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1790467, Length=84, Percent_Identity=42.8571428571429, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1787792, Length=121, Percent_Identity=30.5785123966942, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1790544, Length=87, Percent_Identity=40.2298850574713, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1788506, Length=94, Percent_Identity=40.4255319148936, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1786872, Length=87, Percent_Identity=40.2298850574713, Blast_Score=63, Evalue=8e-12,
Organism=Escherichia coli, GI1787105, Length=73, Percent_Identity=46.5753424657534, Blast_Score=63, Evalue=9e-12,
Organism=Escherichia coli, GI1787758, Length=82, Percent_Identity=34.1463414634146, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789891, Length=79, Percent_Identity=41.7721518987342, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788225, Length=83, Percent_Identity=44.578313253012, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI145693107, Length=77, Percent_Identity=40.2597402597403, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1787089, Length=89, Percent_Identity=40.4494382022472, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789672, Length=87, Percent_Identity=40.2298850574713, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789864, Length=88, Percent_Identity=34.0909090909091, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789962, Length=77, Percent_Identity=36.3636363636364, Blast_Score=60, Evalue=5e-11,
Organism=Escherichia coli, GI1788644, Length=98, Percent_Identity=37.7551020408163, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 17250; Mature: 17119

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSPQISSDIVGLERFAKALPRQLSGGMQQRVAIARALAAQPKILLMDEPFGALDVQTK
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
ETMQEFLLDLWQRTRTSILMITHDVEEAVFLAQRIYVLTSHPGRVKRELRVDFPSRRDYS
HHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
LKRTSSFQEVKDEILALLREQKGIPLSDAAPAG
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TSSPQISSDIVGLERFAKALPRQLSGGMQQRVAIARALAAQPKILLMDEPFGALDVQTK
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
ETMQEFLLDLWQRTRTSILMITHDVEEAVFLAQRIYVLTSHPGRVKRELRVDFPSRRDYS
HHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
LKRTSSFQEVKDEILALLREQKGIPLSDAAPAG
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]