| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is gvpV
Identifier: 86609880
GI number: 86609880
Start: 2546377
End: 2546670
Strand: Direct
Name: gvpV
Synonym: CYB_2445
Alternate gene names: NA
Gene position: 2546377-2546670 (Clockwise)
Preceding gene: 86609878
Following gene: 86609881
Centisome position: 83.58
GC content: 61.22
Gene sequence:
>294_bases GTGCCCCGAACTCGACCTCGCCCCAAGCTGCGCTCGATCCCTCGCCGCCAAACCGAATCCGCCCTCTATGCCGAAATGCA GCAGCTCACTGTCGAAAAGCAGCGGCTCAACCAAGAGCTAGAGTTTATTCGAGAGCGGCAAGGGCAAATCCACGCGCGAC TCCAGGAAATCGAGCAGGCCATGCAGCACCTTCAGCAGGAGGCAAAAGCCTTCCGGGATCCCGCTCCTGCCTCTGAACCC GCCCAGCTCAGATCCCGCCCTTCCCGCTTCCCGCCCATGACCTTCGAGTATTGA
Upstream 100 bases:
>100_bases CGGACGAATGGATCCTACCTAGGAATAGAAGGGCCGCCAAGAGCACGCTAGGATAGGCGCAAGCCGTTTTCCGGGATCCC CCCTTATGAGCTTGCCCCGT
Downstream 100 bases:
>100_bases GGGATCCTATAAATCTCAAAGAAGACCCAAGATTCAAAGCAGACCTAAGCAACAAGTCAGGGGATTCTGTAGCCAACTTA ACTATTTGCTGCTTACCTCA
Product: gas vesicle protein V
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MPRTRPRPKLRSIPRRQTESALYAEMQQLTVEKQRLNQELEFIRERQGQIHARLQEIEQAMQHLQQEAKAFRDPAPASEP AQLRSRPSRFPPMTFEY
Sequences:
>Translated_97_residues MPRTRPRPKLRSIPRRQTESALYAEMQQLTVEKQRLNQELEFIRERQGQIHARLQEIEQAMQHLQQEAKAFRDPAPASEP AQLRSRPSRFPPMTFEY >Mature_96_residues PRTRPRPKLRSIPRRQTESALYAEMQQLTVEKQRLNQELEFIRERQGQIHARLQEIEQAMQHLQQEAKAFRDPAPASEPA QLRSRPSRFPPMTFEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11583; Mature: 11452
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTRPRPKLRSIPRRQTESALYAEMQQLTVEKQRLNQELEFIRERQGQIHARLQEIEQA CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQHLQQEAKAFRDPAPASEPAQLRSRPSRFPPMTFEY HHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure PRTRPRPKLRSIPRRQTESALYAEMQQLTVEKQRLNQELEFIRERQGQIHARLQEIEQA CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQHLQQEAKAFRDPAPASEPAQLRSRPSRFPPMTFEY HHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA