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The map label for this gene is 86609874

Identifier: 86609874

GI number: 86609874

Start: 2541683

End: 2542405

Strand: Direct

Name: 86609874

Synonym: CYB_2440

Alternate gene names: NA

Gene position: 2541683-2542405 (Clockwise)

Preceding gene: 86609873

Following gene: 86609878

Centisome position: 83.42

GC content: 63.49

Gene sequence:

>723_bases
ATGACGACGAGGAGGAGTGAGGCGCTGGGTCTCCAGGATTGGGCCACTTTGCAAACTGAAATCGTCAGTTGCTGCCGCTG
CCCCCGCTTGGTGGCCTGGCGAGAGTCAGTCGCCCTTCAGAAGGTGGCCCGTTTTCGCGACCAGCTCTACTGGGGCCGAC
CGGTGCCAGGGTTCGGGGATCCGCAGGCGCGGCTGTGGGTGATCGGGTTGGCGCCGGCAGCCCATGGGGGCAACCGCACC
GGGCGCGTGTTTACCGGGGATCCCAGCGGGGACTGGCTGTTTCGCGCCCTGTACCGAGCCGGGTTTGCCAATCAGCCCAC
CTCTACCCACCGAGAGGATGGCCTGCAATTGCAGGATTGCTACATCTCGGCAGTGGTGCGCTGTGTGCCCCCGGAGAACC
GCCCCACCGCCATAGAAGCCAAGACCTGCCTGGGCTACCTGAAGCAAGAGCTGGAGCTGCTAACCCAGGTGCGAGTGATC
CTGACGTTGGGGCATTTTGCCTTCCAACACGCTCTGACGCTCTTGCCACCTCTCAGGCCCCGTCCCCGCTTTGGCCACAA
TTGCGTTATTCCTTTGGCAGAGGGTCGCTATTTGCTGGCGTCTTACCATCCCAGCCGGCGCAACACCGCCACACGGCTGC
TGACGGAGCCGATGTTGGATGCCGTTTTCGCGCAAGCCCAGCAGTTGCTGTCTGGTAAGCCAGCCCGACCGGGTGAGCAT
TAG

Upstream 100 bases:

>100_bases
GAAGAGCCTGCGGTGTTGCCGGAGCTGCCGCCTCGTTTGATCTTGGAAGATGATCAATTGATCGACGATTCCACCCCTGC
CTTCGACGAGCTAGAGGAGG

Downstream 100 bases:

>100_bases
GCGGGTTGCCAAGATTCGAGGCGATAGGCACTGTCCCAAAACAGCCATTCCAACCGGGAGGCAGTGACAAAAGCTGCCCT
CATCTTTTCCCGCAGCGGCT

Product: uracil-DNA glycosylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGDPQARLWVIGLAPAAHGGNRT
GRVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDCYISAVVRCVPPENRPTAIEAKTCLGYLKQELELLTQVRVI
LTLGHFAFQHALTLLPPLRPRPRFGHNCVIPLAEGRYLLASYHPSRRNTATRLLTEPMLDAVFAQAQQLLSGKPARPGEH

Sequences:

>Translated_240_residues
MTTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGDPQARLWVIGLAPAAHGGNRT
GRVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDCYISAVVRCVPPENRPTAIEAKTCLGYLKQELELLTQVRVI
LTLGHFAFQHALTLLPPLRPRPRFGHNCVIPLAEGRYLLASYHPSRRNTATRLLTEPMLDAVFAQAQQLLSGKPARPGEH
>Mature_239_residues
TTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGDPQARLWVIGLAPAAHGGNRTG
RVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDCYISAVVRCVPPENRPTAIEAKTCLGYLKQELELLTQVRVIL
TLGHFAFQHALTLLPPLRPRPRFGHNCVIPLAEGRYLLASYHPSRRNTATRLLTEPMLDAVFAQAQQLLSGKPARPGEH

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 26874; Mature: 26743

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGD
CCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PQARLWVIGLAPAAHGGNRTGRVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDC
CCCEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHH
YISAVVRCVPPENRPTAIEAKTCLGYLKQELELLTQVRVILTLGHFAFQHALTLLPPLRP
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RPRFGHNCVIPLAEGRYLLASYHPSRRNTATRLLTEPMLDAVFAQAQQLLSGKPARPGEH
CCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTRRSEALGLQDWATLQTEIVSCCRCPRLVAWRESVALQKVARFRDQLYWGRPVPGFGD
CCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PQARLWVIGLAPAAHGGNRTGRVFTGDPSGDWLFRALYRAGFANQPTSTHREDGLQLQDC
CCCEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHH
YISAVVRCVPPENRPTAIEAKTCLGYLKQELELLTQVRVILTLGHFAFQHALTLLPPLRP
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RPRFGHNCVIPLAEGRYLLASYHPSRRNTATRLLTEPMLDAVFAQAQQLLSGKPARPGEH
CCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]